BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0159 (707 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine rece... 33 0.26 U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 29 3.3 AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep... 29 3.3 U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 28 5.7 Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 27 9.9 >U80024-9|AAK18886.1| 300|Caenorhabditis elegans Serpentine receptor, class bc (class b-like) protein 10 protein. Length = 300 Score = 32.7 bits (71), Expect = 0.26 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 406 SLERCVFDTWAPRRTINALLMACQALLFVKL 498 ++++C FD WA R + AL C LL +KL Sbjct: 176 AVDKCFFDHWADRSIMYALNFLCSGLLSIKL 206 >U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor substrate homologprotein 1 protein. Length = 1003 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 582 MKYLEHQRQKTKNQGKVDYLTSSSSARST 668 +KYL +++ K QG +D SSSS+ ST Sbjct: 869 LKYLADIKKRKKEQGAIDTTNSSSSSLST 897 >AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor substrate-likeprotein protein. Length = 1003 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 582 MKYLEHQRQKTKNQGKVDYLTSSSSARST 668 +KYL +++ K QG +D SSSS+ ST Sbjct: 869 LKYLADIKKRKKEQGAIDTTNSSSSSLST 897 >U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine receptor, class b (beta)protein 12 protein. Length = 348 Score = 28.3 bits (60), Expect = 5.7 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +3 Query: 525 YRSQTTITNMICTLLMPSLMKYLEHQRQKTKNQG-KVDYLTSSSSARSTF 671 Y ITN IC L++ + K L HQR + KN V Y S S F Sbjct: 192 YMLYLKITNFICNLILLFIHKIL-HQRYRRKNVSLSVKYEMQEISQSSRF 240 >Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical protein F23H12.6 protein. Length = 1025 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 554 DMHSFNAILDEIPGTSKAKDEESREGRLSNIIFVCSK 664 D++SF+ + E+ G S A + E+R+ IIF+ + Sbjct: 692 DVYSFSIVCSELVGHSSAWNLENRKEEADEIIFMVKR 728 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,811,077 Number of Sequences: 27780 Number of extensions: 325312 Number of successful extensions: 748 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 748 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1645110168 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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