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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0159
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine rece...    33   0.26 
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    29   3.3  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    29   3.3  
U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine rece...    28   5.7  
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 10 protein.
          Length = 300

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 406 SLERCVFDTWAPRRTINALLMACQALLFVKL 498
           ++++C FD WA R  + AL   C  LL +KL
Sbjct: 176 AVDKCFFDHWADRSIMYALNFLCSGLLSIKL 206


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 582 MKYLEHQRQKTKNQGKVDYLTSSSSARST 668
           +KYL   +++ K QG +D   SSSS+ ST
Sbjct: 869 LKYLADIKKRKKEQGAIDTTNSSSSSLST 897


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 582 MKYLEHQRQKTKNQGKVDYLTSSSSARST 668
           +KYL   +++ K QG +D   SSSS+ ST
Sbjct: 869 LKYLADIKKRKKEQGAIDTTNSSSSSLST 897


>U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 12 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 525 YRSQTTITNMICTLLMPSLMKYLEHQRQKTKNQG-KVDYLTSSSSARSTF 671
           Y     ITN IC L++  + K L HQR + KN    V Y     S  S F
Sbjct: 192 YMLYLKITNFICNLILLFIHKIL-HQRYRRKNVSLSVKYEMQEISQSSRF 240


>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
           protein F23H12.6 protein.
          Length = 1025

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 554 DMHSFNAILDEIPGTSKAKDEESREGRLSNIIFVCSK 664
           D++SF+ +  E+ G S A + E+R+     IIF+  +
Sbjct: 692 DVYSFSIVCSELVGHSSAWNLENRKEEADEIIFMVKR 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,811,077
Number of Sequences: 27780
Number of extensions: 325312
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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