Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0158
(533 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.14
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.33
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.44
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 28 1.0
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 1.3
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 1.3
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 27 1.8
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 27 1.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.8
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 3.1
SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit L11... 25 5.4
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 7.1
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 25 7.1
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 25 9.4
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 9.4
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 25 9.4
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 9.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.14
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 93 IISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRN 272
I S S +S++T + S + SS + +S S ++ PT+ + T SS +
Sbjct: 240 IPSTSSSSSSTSSSLSSSSS----SSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 273 SSSQPTTGSSTL 308
SSS PT+ SST+
Sbjct: 296 SSSSPTSTSSTI 307
Score = 29.1 bits (62), Expect = 0.44
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 349 TTGDTHAAFKLSLDS-PQTSSSTGDTHAAFKLSLDSPHASSSTGPCKLISARTT 507
++ T + LS S P TSSS+ T ++ S S ASSS+ +IS+ ++
Sbjct: 225 SSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS 278
Score = 27.9 bits (59), Expect = 1.0
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 93 IISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRN 272
IIS+S +S+++ + S + SS S ++ S ++ T + + SS +
Sbjct: 272 IISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSS 331
Query: 273 SSSQPTTGSSTLGVTHLRRGSSA 341
SS PT+ SST+ + SS+
Sbjct: 332 FSSSPTSSSSTISSSSSSPSSSS 354
Score = 26.6 bits (56), Expect = 2.3
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
S S +S++T+ + S + +S S ++ S + ++ + SS +SS
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSS 280
Query: 279 SQPTTGSSTL 308
S PT+ SST+
Sbjct: 281 SSPTSTSSTI 290
Score = 26.2 bits (55), Expect = 3.1
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +3
Query: 57 PAT*SEHAIF*FIISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP 236
P+T S + +S+S +S+T + S SS S + S ++ P
Sbjct: 241 PSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSP 300
Query: 237 TAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSS 338
T+ + T SS SSS ++ SSTL + + SS
Sbjct: 301 TSTSSTISS---SSSSSSSFSSTLSSSSMSSSSS 331
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 0.33
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
S+S T+ TT P+ S SS S +S S ++ ++ + ++SS +SS
Sbjct: 145 SSSSTTTTTSPSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 196
Query: 279 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSR 389
S ++ SS+ V SS+H + S + SR
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSR 233
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/70 (22%), Positives = 36/70 (51%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNS 275
+S+S S+TT + S + ++ + P+S S ++ ++ + ++SS +S
Sbjct: 127 VSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 186
Query: 276 SSQPTTGSST 305
SS ++ SS+
Sbjct: 187 SSSSSSSSSS 196
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.44
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +3
Query: 111 TSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPT 290
T++T+ + I SS S P + + T++P P T+S+ NSS PT
Sbjct: 167 TTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSSPLPT 224
Query: 291 TGSSTLGVTHLRRGSSAHM 347
T +S T + G S+ +
Sbjct: 225 TSTSCTTSTSIPTGGSSSL 243
Score = 24.6 bits (51), Expect = 9.4
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
S S T++T+IP SS S P + + T++P P T+S+ NSS
Sbjct: 226 STSCTTSTSIPTGGS-------SSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSS 276
Query: 279 SQPTTGSS 302
PTT +S
Sbjct: 277 PLPTTSTS 284
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 91 SSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSL 255
S + + S S + K I+ A H++ NRT DSP +V TT L
Sbjct: 295 SHQPYHYTNVKDSQGSHQTKVTIEENMEAPSHQAANRTTLTDSPLGIVEDETTIL 349
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 1.3
Identities = 26/108 (24%), Positives = 42/108 (38%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
S RT+ + I + + K ++ + +Q + LP P+A T+S N S
Sbjct: 51 SKGRTTQSAINSENSDKEKY--KKEILEIKEREQRMLAEALGLPQPSALALTSSKAANRS 108
Query: 279 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRH 422
S T S + H S + RH R + ++R H RH
Sbjct: 109 STNTEKDSR-SIAHSTSRSRSTSPANRHRRKEKERTRSNHRHGSHRRH 155
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +3
Query: 93 IISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRN 272
++S+ T +P S +RH S+ +KPA+ + + LP + + SR N
Sbjct: 96 VVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAA-VSPNPAAHHAELPSGSVPPSASVSRAN 154
Query: 273 SSSQPTTGSSTLGVTHLRRGSSAHM 347
S++ TT GV ++ H+
Sbjct: 155 STA--TTTPHKAGVVSNPAAANVHV 177
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 122 HNPRILADKSTSLTVVPQQASIAASTGPSQPTHRAS 229
H P + DK+ VP +A++ + G S+P AS
Sbjct: 65 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISAS 100
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 243 HNFTASSRRNSSSQPTTGSSTLGVTHL 323
H +T S NS QP+ SST GV L
Sbjct: 253 HRYTPSENLNSDGQPSYTSSTHGVLML 279
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 93 IISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRN 272
II +S S T PA ++++ SS S QP S ++P ++ +S+ +
Sbjct: 427 IIVSSYVSTVTQPASTRVQTTT-VSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPIS 485
Query: 273 SSSQPTTGSSTLGVT 317
SSS ++ STL +
Sbjct: 486 SSSSASSPQSTLSTS 500
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +1
Query: 253 LPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAA 432
L H +HR+P+P +R + +L + T+ A K + PQ S +
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNLASKPVISLPQADSIDKFRYPK 179
Query: 433 FKLSLDSPHASSS 471
+L + A++S
Sbjct: 180 LHAALQAQLANNS 192
>SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit
L11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 214 DSPRFLVLRHTTSLPHHAATV 276
+SP FL+L+H LP A ++
Sbjct: 34 ESPNFLILQHNNLLPREAKSL 54
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 168 SHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSS 302
S KPA+ + +T T N + + N+ S PTTG S
Sbjct: 227 SFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFS 271
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/43 (18%), Positives = 19/43 (44%)
Frame = +1
Query: 169 PTASQHRSLNRTIAADSPRFLVLRHTTSLPHHAATVHRSPRPD 297
P R+ N+ + + P+ + + HH +++ +PD
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVKKPD 719
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 172 TASQHRS-LNRTIAADSPRFLVLRHTTSLPHHAATVHRSP 288
T S+ S LN + ++ +++ + +S HH +H+SP
Sbjct: 31 TFSKRNSILNNQVCFEAIKYIQRHYFSSQSHHVTYLHQSP 70
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +2
Query: 227 SWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCTHGLLATRT 367
SW Y + L Q F A G +SP QL HG+ A T
Sbjct: 79 SWVYASWAIGLFLYQSFDAIDGSQARRTGTSSPLGQLFDHGVDAINT 125
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 151 HVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPHHAATVHRSPR 291
H+ D P S R+ +RT++ S +L +RH + H++PR
Sbjct: 230 HMYD--PYTSPLRTPSRTLSRSSSHYLWVRHGKLTRSVSLLQHKTPR 274
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 92 ESEDCVFRSRRRSPVLGVLTTKGKI 18
ESE + S R+P LG+ TT ++
Sbjct: 1603 ESEHSILTSTTRTPSLGIYTTDAQL 1627
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,085,942
Number of Sequences: 5004
Number of extensions: 41779
Number of successful extensions: 221
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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