Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0158
(533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10) 40 0.002
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 34 0.084
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 34 0.084
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 33 0.11
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 31 0.59
SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9) 31 0.78
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 29 1.8
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 29 2.4
SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46) 29 2.4
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 29 2.4
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 3.2
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 4.2
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 4.2
SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_17149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_58118| Best HMM Match : Somatomedin_B (HMM E-Value=3.7) 27 7.3
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23) 27 7.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_51999| Best HMM Match : VWA (HMM E-Value=0.045) 27 7.3
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_27693| Best HMM Match : Kringle (HMM E-Value=8.4) 27 7.3
SB_1865| Best HMM Match : DUF1168 (HMM E-Value=5) 27 7.3
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 27 9.6
SB_51578| Best HMM Match : Hormone_5 (HMM E-Value=1.2) 27 9.6
SB_47639| Best HMM Match : Pox_A32 (HMM E-Value=0.075) 27 9.6
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 27 9.6
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 9.6
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_55886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_26819| Best HMM Match : L27 (HMM E-Value=9.5) 27 9.6
SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_8157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_7902| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10)
Length = 293
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 141 QIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSR-RNSSSQPTTGSSTLGVT 317
Q+ AR+ +SH++ S H +L A +H SS RN+SS TT T G T
Sbjct: 141 QLVARN-NTSHTRNNSS----HTEQLIAHTNNWSHTRNNSSHTRNNSSHGTT-HRTHGTT 194
Query: 318 HLRRGSSAH-MDYWRHARSIQAQSRLTADFEQHWRHARSI*AQ-PRLTACFEQ 470
H + +S+H + W H R+ T EQH H + A +L A EQ
Sbjct: 195 HHTQNNSSHTRNNWSHTRTTHRTQGTTRRTEQHIAHTEQLIAHTEQLIAHTEQ 247
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 35.5 bits (78), Expect = 0.027
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQ----PQQDHRSR-LTALPGPTAHNFTASS 263
S++ TSAT + S + H K S PQ S+ L ++PG + T+SS
Sbjct: 393 SSASTSATISISKSSADKSTKKQGHGKGKSNKRMIPQSSTESQVLISVPGSQPQSSTSSS 452
Query: 264 RRNSSSQPTTGSSTLGVTHLRRGSSA 341
NS S P++ SST T SSA
Sbjct: 453 SSNSQSSPSSSSSTTSATISISKSSA 478
Score = 33.5 bits (73), Expect = 0.11
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQ----PQQDHRSR-LTALPGPTAHNFTASS 263
S+S TSAT + S + H K + PQ S+ L ++PG + T+SS
Sbjct: 463 SSSTTSATISISKSSADKSTRKQGHGKGTNNKRMIPQSSTESQVLISVPGSQPQSSTSSS 522
Query: 264 RRNSSSQPTTGSSTLGVTHLRRGSSA 341
N S P++ SST T SSA
Sbjct: 523 SSNLQSSPSSSSSTTSATISISKSSA 548
>SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 600
Score = 33.9 bits (74), Expect = 0.084
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -1
Query: 503 VRAEISLQGPVLLEAC---GESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 351
V + +++ +L C G SR+S+N+ +SPV +V G SR+++N+ +SPV
Sbjct: 337 VLSRVTINSDILSSVCSDEGLSRVSINSDTLSPVCSDV-GLSRVTINSDILSPV 389
Score = 31.5 bits (68), Expect = 0.45
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = -1
Query: 497 AEISLQGPVLLEAC---GESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 351
+ +++ +L C G SR+S+N+ +SPV +V G SR+++N+ +SP+
Sbjct: 377 SRVTINSDILSPVCSDEGLSRVSINSDILSPVCSDV-GLSRVTINSDILSPL 427
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 33.9 bits (74), Expect = 0.084
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 79 QSSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLP 258
Q SD S H++ LP +PH +R KHV+D+ T + H+ ++ I ++ + H T
Sbjct: 120 QDSDFSVVHEK-ELPPNPHEQRVKHVVDT--TQAYHQDNDKEIDEENEQ----DHNTRQA 172
Query: 259 HHAAT 273
AAT
Sbjct: 173 DSAAT 177
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 33.9 bits (74), Expect = 0.084
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 79 QSSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLP 258
Q SD S H++ LP +PH +R KHV+D+ T + H+ ++ I ++ + H T
Sbjct: 80 QDSDFSVVHEK-ELPPNPHEQRVKHVVDT--TQAYHQDNDKEIDEENEQ----DHNTRQA 132
Query: 259 HHAAT 273
AAT
Sbjct: 133 DSAAT 137
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +3
Query: 51 W*PAT*SEHAIF*FIISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALP 230
W T +H++ + SA ++ I + + +SH P S+ ++P
Sbjct: 242 WRHVTPYQHSVSRHVTSALGATSRNISTWCHV------TSHEHPVSR-------HAISVP 288
Query: 231 GPTAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQ--AQSRLTADF 404
G T+H+ S+ ++ S+ T ST GVT + +S H+ WRH S Q +T+
Sbjct: 289 GVTSHHI--STWCHAVSRHVT--STHGVTSHQYLASRHISTWRHVTSHQHLVSRSVTSYH 344
Query: 405 EQHWRHARS 431
WRH S
Sbjct: 345 ISTWRHVTS 353
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 33.5 bits (73), Expect = 0.11
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Frame = +1
Query: 97 SAHQELRLPQ-SPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPHHAAT 273
S H P+ S H R +H+ P S H L+R + ++ R + H +S HH
Sbjct: 246 SRHHHCHRPRLSNHHRPSRHLHCHCPRLSNHHRLSRHLHSNRLRLSIHHHPSSRHHHC-- 303
Query: 274 VHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSP-QTSSSTGDTHAAFKLSLD 450
HR +H R ++ A + T H +S S Q+S S + + S
Sbjct: 304 -HRLRLSNHHRPSRYLHVTALVFPITI--VHLVIFMSPPSSFQSSPSVSSSSLSPPSSFQ 360
Query: 451 SPHASS 468
S H S
Sbjct: 361 SYHRPS 366
Score = 31.9 bits (69), Expect = 0.34
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +1
Query: 19 IFPFVVKTPKTGDLRRDLNTQSSDSSSAHQELRLPQ-SPHSRR*KHVIDSRPTASQHRSL 195
+FPF+ + L + QSS S S H P+ S H R +H RP S H
Sbjct: 204 VFPFISSIFSSSSLSPPSSLQSS-SPSRHLHCHRPRLSNHHRPSRHHHCHRPRLSNHHRP 262
Query: 196 NRTIAADSPRFLVLRHTTSLPHHA----ATVHRSPRPDH 300
+R + PR L H S H+ ++H P H
Sbjct: 263 SRHLHCHCPR-LSNHHRLSRHLHSNRLRLSIHHHPSSRH 300
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 174 SKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAH 344
SK S P R R P P + SSR+ S +PT+ SS L L+ S H
Sbjct: 377 SKEKSGPPTPPRHRRNLPPRPVSQMIMPSSRQGRSQEPTSMSSLLAGLSLQSNDSHH 433
>SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.15
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 85 SDSSSAHQELRLPQSPHSRR*KHV-IDSRPTASQHRSLN--RTIAADSPRFLVLRHTTSL 255
S SSS H ++ + +SP S +H+ I P+ HR + R+ ++D R + + + S
Sbjct: 43 SPSSSHHPQITIVRSPSSYHHRHITIVISPSIYHHRHITILRSPSSDHHRHITIDISPSS 102
Query: 256 PHHA-ATVHRSPRPDHQR 306
HH T+ SP H R
Sbjct: 103 YHHRHMTIVISPSSYHHR 120
>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
Length = 877
Score = 31.1 bits (67), Expect = 0.59
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +3
Query: 180 PASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWR 359
P+S QD L A GP + T SS++ S+ S+ HL S + ++
Sbjct: 11 PSSVSSQDIHDALDAFGGPFRNQDTISSKKASNRDSGVSESSFVSDHLTFTSDSLLNEIG 70
Query: 360 HARSIQAQSRLTAD 401
HA + T+D
Sbjct: 71 HANQMPISHNKTSD 84
>SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9)
Length = 196
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVVHVCRAATP 324
V ++S++ P+LLE+ E + L + SPVLL+V + + L ++ PV+ +P
Sbjct: 113 VLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDVSVKLPVLLESSVELPVLLELSVGSP 172
Query: 323 EMCD 312
+ D
Sbjct: 173 VLLD 176
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 348
V ++S++ PVLLE+ E + L + SPVLL+V + + L + PV+
Sbjct: 143 VLLDVSVKLPVLLESSVELPVLLELSVGSPVLLDVSVKLPVLLELSIGLPVL 194
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 348
V E+S+ PVLL+ + + L ++ PVLLE+ S + L+ + PV+
Sbjct: 103 VLLELSVGSPVLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDVSVKLPVL 154
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 348
V E+S+ PVLL+ + + L ++ PVLLE+ S + L+ + PV+
Sbjct: 133 VLLELSVGSPVLLDVSVKLPVLLESSVELPVLLELSVGSPVLLDVSVKLPVL 184
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 348
V E+S+ PVLLE +SL PVLLE+ S + L+ + P++
Sbjct: 73 VLLEVSVDLPVLLEVNVGLHVSLEGTVGLPVLLELSVGSPVLLDVSVKLPML 124
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 204 HRSRLTALPGPTAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQ 383
HR R P + A+ + ++ Q +GS+T H R + + ++RH+ ++ +
Sbjct: 885 HRMRRRYGPEHRKRSIKANEQTITARQELSGSATKEWGHFRPSDTMYFRHFRHSETMYFR 944
Query: 384 SRLTAD--FEQHWRHARSI 434
+D + +H+RH+ ++
Sbjct: 945 HFRPSDTMYFRHFRHSETM 963
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 311 GHTSPAWQLCTHGLL 355
GHT P W LC HG L
Sbjct: 458 GHTGPVWALCVHGEL 472
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 29.5 bits (63), Expect = 1.8
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Frame = +1
Query: 154 VIDSRPTASQHRSLN-----RTIAADSPRFLVLRHTTSLPH--HAATVHRSPRPDHQRLG 312
VI+ A++ +SLN R+ +PR +LR T+S H AT S + H+ +
Sbjct: 741 VIERNDLANEDKSLNVKATRRSKPIAAPRKRILRKTSSRNKIVHGATDGNSSKV-HENVQ 799
Query: 313 SHISGVA--ALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPHASSS 471
I G A + GD D TSS+ GD D + SS+
Sbjct: 800 VKIDGKTDDAKTSSAHGDVQVKIDDKTDDANTSSAHGDVQVKIDGKTDDANTSSA 854
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = +1
Query: 190 SLNRTIAADSPRFLVLRHTTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHA 369
SL RT + +PR + R + P +HR R + L S +A+ TT
Sbjct: 321 SLQRTPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTP 380
Query: 370 AFKLSLDSPQTSSSTGDTHAAFKLSLDSPHASSSTGPCKLISAR 501
+++L T+++ G T A + S S +S + P S+R
Sbjct: 381 PRRVNLLEAFTAAAAG-TPAGSRRSSSSSRSSLPSTPRSRTSSR 423
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
S++ TS+ T+ +S + QS H + S+ H + T PGPT + SSR
Sbjct: 1022 SSTITSSDTV--YSPLPNYLGQSKHDEVCSRATPQHANIDTKEPGPTGRSIDPSSRIQEG 1079
Query: 279 SQ 284
S+
Sbjct: 1080 SR 1081
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 283 SPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPHA 462
SP+P +R SH S +A H +G T + S+ SP++ S S + +
Sbjct: 684 SPKPLSRRSSSHASHIAGSHEQLSGQTSSG---SVGSPKSLSQRSRGREGSSASKSNSKS 740
Query: 463 SSSTGPCKL 489
S S+ P ++
Sbjct: 741 SLSSIPIRV 749
>SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46)
Length = 1266
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
NA+G HT P QLC G L R + SSSV
Sbjct: 858 NAFGTHTCPGEQLCLVGQLGHRARWSSSV 886
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 312 VTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRHARSI 434
+T + S DY R + S+++ SR T+D++QH ++ R +
Sbjct: 457 LTETKSSVSPEKDY-RGSGSVRSSSRRTSDYQQHDQNGRGV 496
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTAS---SR 266
+++ R + P S + QSSHS P + +S + P P + T+S SR
Sbjct: 323 VTSPRATPRASPRASPRASPRDQSSHSSPRNSRNSSRKS--SPKPSPRSSRPTSSRKLSR 380
Query: 267 RNS--SSQPTTGSST 305
++S SS+PT+G +
Sbjct: 381 KSSRKSSRPTSGQQS 395
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 4.2
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Frame = +1
Query: 154 VIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPHHAATVHR--SPRPDHQR---LGSH 318
V+ SR +++ RSL + + +V TSLP T H + D Q + S
Sbjct: 17 VLQSRRSSTYSRSLFFVLLLVAVAIVVFFSQTSLPDFMKTSHSKIARSSDDQMDSVVTSQ 76
Query: 319 ISGVAALHTWTTGDTHAAFKLSLDSPQTSSST 414
I A T THA+ K D TS T
Sbjct: 77 IDKRALFKVSTKEQTHASMKTQADDGLTSEET 108
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 4.2
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 73 NTQSSDSSSAHQELRLPQSPHSRR*KHVIDSR---PTASQHRSLNRTIAADSPRFLVLRH 243
+TQ++ S+++ ++ +P ++ V S P+A+ + ++I A +P +
Sbjct: 1939 STQAAPSAASSTQVAPSMAPSTQTGHSVTPSTQAGPSAASCSQVAQSIVATAPPKPTVAS 1998
Query: 244 TT-SLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTT 354
TT P T H S + + + S VAAL T TT
Sbjct: 1999 TTYQAPSTTTTTHPSQQTTISLVQAQSSPVAALATQTT 2036
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 170 PQQASIAASTGPSQPTH 220
PQ AS+ S G SQPTH
Sbjct: 548 PQHASVGTSMGQSQPTH 564
>SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
+A+G HTSP QLC G L R + SSSV
Sbjct: 305 HAFGTHTSPGKQLCLVGQLGYRGRWSSSV 333
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +1
Query: 280 RSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPH 459
+ P P + +LG + A+ ++W+T D + L+ +S ++ G + ++ S S
Sbjct: 1317 QGPNPGNFQLGLRLGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAE 1376
Query: 460 ASSST 474
A+SST
Sbjct: 1377 AASST 1381
>SB_17149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 376 KLSLDSPQTSSSTGDTHAAFKLSLDSPHASSSTGPCKLISARTTI 510
++SLD+ +T + FK + H S ST PC L+S R+++
Sbjct: 76 EISLDTC-AEYTTLEAVVTFKTHNELEHKSFSTNPCDLLSYRSSV 119
>SB_58118| Best HMM Match : Somatomedin_B (HMM E-Value=3.7)
Length = 306
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 449 SRLSLNA-ACVSPVLLEVCGESRLSLNAACVS 357
+RL+L+A A +P+ L++CG+ LNA VS
Sbjct: 82 ARLTLDAPALKNPIALQLCGDINSPLNALWVS 113
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 382 SLDSPQTSSSTGDTHAAFKLSLDSPHASSST 474
S DSP + S + D+ +++ SLDSP + SS+
Sbjct: 18 SPDSPSSYSPSPDSPSSYSPSLDSPSSYSSS 48
>SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 197 TGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINA 307
TG S P+ + Y TQ+ L T Q + AH NA
Sbjct: 62 TGSSTPSVSGNTDYSTQIKNLTTELQHLGAHMNFHNA 98
>SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23)
Length = 880
Score = 27.5 bits (58), Expect = 7.3
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 6/124 (4%)
Frame = +1
Query: 34 VKTPKTGDLRRDLNTQSSDSSSAHQEL-RLPQSPHSRR*KHVIDSRPTASQHRS---LNR 201
+K K RR+ T SS H +L + + ++ KH + AS + L +
Sbjct: 246 IKNAKEPKKRRNALTVLEIKSSIHNKLVNIQNTENANHGKHATIRKHAASYRKRATILCK 305
Query: 202 TIAADSPRFLVLRHTTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTT--GDTHAAF 375
+ + +L S T+H + P H RL A +HT + +HA
Sbjct: 306 HATSSNKYATILIELKSNNIEHTTIHNNTSPIHTRLAPIHDKSATIHTMSAPIEPSHAFT 365
Query: 376 KLSL 387
+L L
Sbjct: 366 RLQL 369
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 177 KPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSS 302
K + P+ + TA+PG TA T +S ++ TTG++
Sbjct: 2395 KTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAA 2436
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 177 KPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSS 302
K + P+ + TA+PG TA T +S ++ TTG++
Sbjct: 2938 KTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAA 2979
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.5 bits (58), Expect = 7.3
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 154 VIDSRPTAS-QHRSLNRTI-AADSPRFLVLRHTTSLPHHAATVHRSPRPDHQRLGSHISG 327
V++ T S + R+L+ T+ A PR +R S P H+ D + LG
Sbjct: 416 VVNENLTISCETRALHVTLPAVFLPRDYAIRIVYSFPAELKRSHQRHLGDLRILGERRFS 475
Query: 328 VAALHTWTTGDT 363
+ LH TTG T
Sbjct: 476 IVTLHYITTGST 487
>SB_51999| Best HMM Match : VWA (HMM E-Value=0.045)
Length = 92
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 319 ISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFK 438
+ G+A+ T + DTH + DSP + G+ H++++
Sbjct: 34 VKGIASSFTVSPADTHLGLLIYADSPNIEAGLGE-HSSYQ 72
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 7.3
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 SSSAHQELRLP--QSPHSRR*KHVI-DSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPH 261
S SA L+ P QSP ++ HV +S +H + I+A + +LR T + H
Sbjct: 2999 SHSAPVTLKSPWSQSPTAKWGDHVTAESTAVTQEHDTDKSRISAPT----ILRGITGVAH 3054
Query: 262 HAATVHRSPRPDHQRLGSHIS 324
H +T +S R + LGS +S
Sbjct: 3055 HQSTADKSTR-NIAGLGSTLS 3074
>SB_27693| Best HMM Match : Kringle (HMM E-Value=8.4)
Length = 146
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 314 HTSPAWQLCTHGLLATRTQHSSSV 385
HTSP QLC G L R + SSSV
Sbjct: 19 HTSPGKQLCFVGQLGYRGRWSSSV 42
>SB_1865| Best HMM Match : DUF1168 (HMM E-Value=5)
Length = 289
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 157 IDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPHHAATVHRSPRPDHQR 306
+D + +S+ S NRT DS R +T S + H+S +PD R
Sbjct: 75 LDEKAISSRTTSANRTRRPDSYRSKNSENTDSHRSRKSESHQSRKPDSHR 124
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 503 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRL 381
V ++S++ P+LLE+ E + L + SPVLL+ E +L
Sbjct: 193 VLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDWLNEHKL 233
>SB_51578| Best HMM Match : Hormone_5 (HMM E-Value=1.2)
Length = 622
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
+A+G HT P QLC G L R + SSSV
Sbjct: 399 HAFGTHTCPGEQLCLVGQLGHRARWSSSV 427
>SB_47639| Best HMM Match : Pox_A32 (HMM E-Value=0.075)
Length = 911
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
+A+G HT P QLC G L R + SSSV
Sbjct: 667 HAFGTHTCPGEQLCLVGQLGHRARWSSSV 695
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
+A+G HT P QLC G L R + SSSV
Sbjct: 1395 HAFGTHTCPGEQLCLVGQLGHRARWSSSV 1423
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 319 ISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFK 438
+ G+A+ T + DTH + DSP + G+ H++++
Sbjct: 1938 VKGIASSFTVSHADTHLGLLIYADSPNIEAGLGE-HSSYQ 1976
>SB_26513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1460
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 124 QSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLP--HHAATVHRSPRPD 297
+S SR V + +P S+H +++ ++++D+P + + T S H T +P D
Sbjct: 1054 ESGISRNCSVVSNYKPEVSRHDAVDESVSSDAPALIDGKQTLSESTFHDDGTTDVNPFSD 1113
Query: 298 H 300
H
Sbjct: 1114 H 1114
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 55 DLRRDLNTQSSDSSSAHQELRLPQSPHSRR*KHVIDSRPT-ASQHRSLNRTIAADSPRFL 231
D+R L + ++S A QEL L Q + I R T S+ +S ++ + P F
Sbjct: 1156 DVRLSLPSTPTESEEAGQELHLLQETQQAEEEQKITRRETKKSKSKSRKKSSSTVRP-FG 1214
Query: 232 VLRHTTS 252
+++HT S
Sbjct: 1215 MMKHTKS 1221
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.1 bits (57), Expect = 9.6
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Frame = +3
Query: 123 TIPAFSQIKARH*QSSHSKPASQPQQD---------HRSRLTALPGPTAHNFTASSRRNS 275
T+ + S+IKA SS P S+ Q+D HR R P H A ++
Sbjct: 683 TVVSCSEIKASIPTSSAEDPQSEAQKDSVGSGVNTVHRKRTLVSPEGQTHEVKAFI-EST 741
Query: 276 SSQPTTGSSTLGVTHLRRGSSA 341
S + TT S TL T + R SSA
Sbjct: 742 SLENTTPSQTL-KTVMSRTSSA 762
>SB_55886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 302 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 385
+A+G HT P QLC G L R + SSSV
Sbjct: 547 HAFGTHTCPGEQLCLVGQLGHRARWSSSV 575
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAH-NFTASSRRNS 275
S+ TSAT P SQ+ + + S+ S Q+ S++T++ ++ T++++ +
Sbjct: 1141 SSQVTSATQEPPSSQVTSVTQEPRSSQVTSATQESRSSQVTSVTQESSSTQVTSATQESR 1200
Query: 276 SSQPTT 293
SSQ T+
Sbjct: 1201 SSQVTS 1206
>SB_26819| Best HMM Match : L27 (HMM E-Value=9.5)
Length = 168
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 264 RRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRHARSI 434
RR S S S+ + +LR S + ++ WR + S+ R + WR + S+
Sbjct: 25 RRESESIVNLWRSSESMVNLREASESMVNLWRSSESMVNLWRSSESMVNLWRSSESM 81
>SB_9820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 233 TRKRGESAAMVLLRLRCWLAVGRLSMTCFYLRECGDCGSR 114
T+K G + L+R R W+ GR+++ L+ C C R
Sbjct: 91 TKKSGREHVLGLIRQRFWIIKGRVTV-LRVLKSCFSCRRR 129
>SB_8157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 230 WSYGTQLHCLITPQQFIAAHDRI 298
WSYG L C P Q + + +R+
Sbjct: 76 WSYGVLLDCKTFPSQHLTSEERV 98
>SB_7902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1020
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 227 SWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCTHGLL 355
+W Y H +ITP ++ R+++ G+T+ W + T G L
Sbjct: 708 AWFYQYPPHAVITPVLTASSLQRLLHCAGNTN-EWFMLTSGFL 749
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,239,249
Number of Sequences: 59808
Number of extensions: 389302
Number of successful extensions: 1559
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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