Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0158
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   0.91 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   2.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   2.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   3.7  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   3.7  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   4.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.4  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 207 RSRLTALPGPTAHNFTASS 263
           R+RLT L GP A + TAS+
Sbjct: 764 RNRLTTLDGPLAESLTAST 782


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -3

Query: 348 PCVQSCHAGDV*PQALMIRSWAAMNCCGVMRQ*SCV-P*DQEAR*V----GCDGPVEAAM 184
           PC  SC  G     A   + ++ +NC     Q  C  P  +E   +    GC GP ++  
Sbjct: 159 PCHPSCEVGCWGEGAHNCQRFSKLNCSPQCSQGRCFGPKPRECCHLFCAGGCTGPTQSDC 218

Query: 183 LAC 175
           LAC
Sbjct: 219 LAC 221


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 188 AASTGPSQPTHR 223
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
 Frame = +1

Query: 268 ATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSL 447
           +T  R  R  H R  S+ S   +  T   G T A    S++ P     T       + +L
Sbjct: 422 STTDREKRLSHDRKPSYSSSERS-STGILGGTAAYLPASIN-PVKLRETSTIRRQRRTAL 479

Query: 448 ---DSPHASSSTGPCKLISARTTI 510
              D PH+SS        S RT+I
Sbjct: 480 GNRDEPHSSSGNWSASSESGRTSI 503


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
 Frame = +1

Query: 268 ATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSL 447
           +T  R  R  H R  S+ S   +  T   G T A    S++ P     T       + +L
Sbjct: 423 STTDREKRLSHDRKPSYSSSERS-STGILGGTAAYLPASIN-PVKLRETSTIRRQRRTAL 480

Query: 448 ---DSPHASSSTGPCKLISARTTI 510
              D PH+SS        S RT+I
Sbjct: 481 GNRDEPHSSSGNWSASSESGRTSI 504


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 144 IKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNS 275
           I A+  Q  H     QPQQ H+ +  + P  T   F      N+
Sbjct: 302 ILAQQQQQQHHHHQHQPQQQHQQQYHSHPHHTPVQFKTELHDNT 345


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 80 CVFRSRRRSPVLGVLTTKGK 21
          C +R  R SP   +LTT+G+
Sbjct: 5  CAWRCARASPSRPILTTRGR 24


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 328 RRRCVTPSVDDPVVGCDELLRRDEAVKLCAVGPGSAVSRL 209
           RR   TPS DDP+   + L + D  V       G+A + L
Sbjct: 333 RRDAFTPSKDDPIFVNEMLHKVDLTVNERGTEGGAATATL 372


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 110 NFGYHNPRILADKSTSLTVVPQQASIAASTGP 205
           NF Y    +L+D+ T L    +QA +   TGP
Sbjct: 40  NFFYAIQFVLSDEFTHLRPEQRQALLHEGTGP 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,242
Number of Sequences: 2352
Number of extensions: 12396
Number of successful extensions: 78
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)