Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0158
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens ... 35 0.21
AB075855-1|BAB85561.1| 597|Homo sapiens KIAA1975 protein protein. 35 0.21
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain contai... 34 0.36
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 34 0.36
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 34 0.36
DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein. 34 0.36
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 34 0.36
BC031482-1|AAH31482.1| 989|Homo sapiens C10orf12 protein protein. 32 1.1
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read... 32 1.1
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read... 32 1.1
AK023084-1|BAB14396.1| 914|Homo sapiens protein ( Homo sapiens ... 32 1.1
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 31 1.9
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 3.4
M92299-1|AAA52682.1| 269|Homo sapiens homeobox protein protein. 30 5.9
BC117247-1|AAI17248.1| 269|Homo sapiens homeobox B5 protein. 30 5.9
AF287967-3|AAG31553.1| 269|Homo sapiens homeobox B5 protein. 30 5.9
U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation facto... 29 7.8
>AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ42547 fis, clone BRACE3004880. ).
Length = 256
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -1
Query: 473 VLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVC 339
V L ACG SR++L+A +S + CG SR++L+A +S + V C
Sbjct: 151 VTLSACGLSRVTLSACGLSSMTPSACGLSRVTLSACHLSSMTVSTC 196
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 473 VLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVC 339
V L A G S ++L+A C+S + L CG S +L A +S V V C
Sbjct: 101 VTLSAWGLSSVTLSACCLSSMTLSACGLSSTTLFACRLSSVTVSTC 146
Score = 30.7 bits (66), Expect = 3.4
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 461 ACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV-VHVCR 336
ACG SR++L+A +S + + CG S ++L A +S + + CR
Sbjct: 175 ACGLSRVTLSACHLSSMTVSTCGLSSMTLFACGLSSMTLSACR 217
>AB075855-1|BAB85561.1| 597|Homo sapiens KIAA1975 protein protein.
Length = 597
Score = 34.7 bits (76), Expect = 0.21
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 85 SDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHTTSLPHH 264
S SS+ +L LP SPH+ + KH+ + L+ T + +F+++ T H
Sbjct: 275 SISSTTSPKLNLPPSPHANKKKHLKKKSTNNLKDDGLSSTAEEEEEKFMIVSVTGQTCHF 334
Query: 265 AATVH 279
AT +
Sbjct: 335 KATTY 339
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( S domain
containing protein ).).
Length = 2193
Score = 33.9 bits (74), Expect = 0.36
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +1
Query: 244 TTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDT 423
T +P A++ HR + D R S ++ + T +T A D+P+ SS+ DT
Sbjct: 100 TREIPR-ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDT 157
Query: 424 HAAFKLSLDSPHASSSTGPCKLISARTT 507
A ++P ASS + +L + RT+
Sbjct: 158 PRASSTQWNTPRASSPSRSTQLDNPRTS 185
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 33.9 bits (74), Expect = 0.36
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +1
Query: 244 TTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDT 423
T +P A++ HR + D R S ++ + T +T A D+P+ SS+ DT
Sbjct: 272 TREIPR-ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDT 329
Query: 424 HAAFKLSLDSPHASSSTGPCKLISARTT 507
A ++P ASS + +L + RT+
Sbjct: 330 PRASSTQWNTPRASSPSRSTQLDNPRTS 357
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 33.9 bits (74), Expect = 0.36
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +1
Query: 244 TTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDT 423
T +P A++ HR + D R S ++ + T +T A D+P+ SS+ DT
Sbjct: 272 TREIPR-ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDT 329
Query: 424 HAAFKLSLDSPHASSSTGPCKLISARTT 507
A ++P ASS + +L + RT+
Sbjct: 330 PRASSTQWNTPRASSPSRSTQLDNPRTS 357
>DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein.
Length = 1144
Score = 33.9 bits (74), Expect = 0.36
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +1
Query: 244 TTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDT 423
T +P A++ HR + D R S ++ + T +T A D+P+ SS+ DT
Sbjct: 100 TREIPR-ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDT 157
Query: 424 HAAFKLSLDSPHASSSTGPCKLISARTT 507
A ++P ASS + +L + RT+
Sbjct: 158 PRASSTQWNTPRASSPSRSTQLDNPRTS 185
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 33.9 bits (74), Expect = 0.36
Identities = 25/88 (28%), Positives = 42/88 (47%)
Frame = +1
Query: 244 TTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDT 423
T +P A++ HR + D R S ++ + T +T A D+P+ SS+ DT
Sbjct: 100 TREIPR-ASSPHRITQRDTSRASSTQQEISRASS-TQQETSRASSTQEDTPRASSTQEDT 157
Query: 424 HAAFKLSLDSPHASSSTGPCKLISARTT 507
A ++P ASS + +L + RT+
Sbjct: 158 PRASSTQWNTPRASSPSRSTQLDNPRTS 185
>BC031482-1|AAH31482.1| 989|Homo sapiens C10orf12 protein protein.
Length = 989
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 64 RDLNTQSSDSSSAHQELRLPQSPHSRR*K 150
R L QSSDSSSA E+++P++P ++R K
Sbjct: 353 RCLRNQSSDSSSACLEIKVPKNPSAKRSK 381
>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
frame 12 protein.
Length = 1247
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 64 RDLNTQSSDSSSAHQELRLPQSPHSRR*K 150
R L QSSDSSSA E+++P++P ++R K
Sbjct: 519 RCLRNQSSDSSSACLEIKVPKNPSAKRSK 547
>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
frame 12 protein.
Length = 1247
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 64 RDLNTQSSDSSSAHQELRLPQSPHSRR*K 150
R L QSSDSSSA E+++P++P ++R K
Sbjct: 519 RCLRNQSSDSSSACLEIKVPKNPSAKRSK 547
>AK023084-1|BAB14396.1| 914|Homo sapiens protein ( Homo sapiens
cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 914
Score = 32.3 bits (70), Expect = 1.1
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 64 RDLNTQSSDSSSAHQELRLPQSPHSRR*K 150
R L QSSDSSSA E+++P++P ++R K
Sbjct: 186 RCLRNQSSDSSSACLEIKVPKNPSAKRSK 214
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 31.5 bits (68), Expect = 1.9
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 2/133 (1%)
Frame = +1
Query: 40 TPKTGDLRRDLNTQSSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADS 219
TP+ G R T+++ + + E PQ+PH+ S PTA + A S
Sbjct: 1373 TPQPGQPTRPTATETTQTRTT-TEYTTPQTPHTTH------SPPTAGSPVPSTGPVTATS 1425
Query: 220 PRFLVLRHTTSLPHHAATVHRSPRPDHQRLGSHISGVAALHTW--TTGDTHAAFKLSLDS 393
T S P H P S + + H ++ H+A ++
Sbjct: 1426 FHATTTYPTPSHPETTLPTHVPPFSTSLVTPSTHTVITPTHAQMASSASNHSAPTGTIPP 1485
Query: 394 PQTSSSTGDTHAA 432
P T +TG TH A
Sbjct: 1486 PTTLKATGSTHTA 1498
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 30.7 bits (66), Expect = 3.4
Identities = 30/106 (28%), Positives = 44/106 (41%)
Frame = +3
Query: 99 SASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSS 278
SASR ++ S+ +RH +S H A RSR + T H T+S + +S
Sbjct: 3234 SASRNHRGSVQEQSRHGSRHPRSHHEDRAGHGHSADRSRQSG----TRHAETSSGGQAAS 3289
Query: 279 SQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHW 416
S SS G H R + D RH+ + Q+ +HW
Sbjct: 3290 SHEQARSSP-GERHGSRHQQS-ADSSRHSGIPRGQASSAVRDSRHW 3333
Score = 30.3 bits (65), Expect = 4.5
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 171 HSKPASQPQQDHRSRLTALPGPTAHNFTASSR---RNSSSQPTTGSSTLGVTHLRRGSSA 341
HS +S H S T+ A + SR R + ++ +G S+ +S
Sbjct: 3128 HSVDSSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSGDSSRHSVSRHHEAST 3187
Query: 342 HMDYWRHARSIQAQS 386
H D RH++++Q QS
Sbjct: 3188 HADISRHSQAVQGQS 3202
>M92299-1|AAA52682.1| 269|Homo sapiens homeobox protein protein.
Length = 269
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = +1
Query: 292 PDHQRL----GSHISGV----AALHTWTTGDTHAAFKLSLDSPQTSSS----TGDTHAAF 435
PD+Q L GS +SG AA+HT + G + LS++ SSS G++ AF
Sbjct: 17 PDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAF 76
Query: 436 KLSLDSPHASSSTGPCKLIS 495
P + C L S
Sbjct: 77 PAPAQEPRFRQAASSCSLSS 96
>BC117247-1|AAI17248.1| 269|Homo sapiens homeobox B5 protein.
Length = 269
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = +1
Query: 292 PDHQRL----GSHISGV----AALHTWTTGDTHAAFKLSLDSPQTSSS----TGDTHAAF 435
PD+Q L GS +SG AA+HT + G + LS++ SSS G++ AF
Sbjct: 17 PDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAF 76
Query: 436 KLSLDSPHASSSTGPCKLIS 495
P + C L S
Sbjct: 77 PAPAQEPRFRQAASSCSLSS 96
>AF287967-3|AAG31553.1| 269|Homo sapiens homeobox B5 protein.
Length = 269
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Frame = +1
Query: 292 PDHQRL----GSHISGV----AALHTWTTGDTHAAFKLSLDSPQTSSS----TGDTHAAF 435
PD+Q L GS +SG AA+HT + G + LS++ SSS G++ AF
Sbjct: 17 PDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAF 76
Query: 436 KLSLDSPHASSSTGPCKLIS 495
P + C L S
Sbjct: 77 PAPAQEPRFRQAASSCSLSS 96
>U02326-1|AAA19951.1| 462|Homo sapiens neu differentiation factor
protein.
Length = 462
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 228 PGPTAHNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDY 353
P HN A RRN + + L THLR S H+ +
Sbjct: 419 PHSERHNLIAELRRNKAHRSKCMQIQLSATHLRSSSIPHLGF 460
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,492,786
Number of Sequences: 237096
Number of extensions: 1769190
Number of successful extensions: 6194
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6128
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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