Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0158
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.098
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.098
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.098
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 32 0.30
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 32 0.30
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 30 1.2
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 30 1.2
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.2
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 29 2.1
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 29 2.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 3.7
AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical ... 28 3.7
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 4.8
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 4.8
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 4.8
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 27 6.4
U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal catech... 27 6.4
U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical pr... 27 6.4
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 27 6.4
AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical... 27 6.4
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 27 6.4
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 8.5
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.5
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 27 8.5
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 27 8.5
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.098
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 90 FIISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRR 269
F ++ TS +T+P+ S + + SS S + P S LT+ P P++ + +
Sbjct: 450 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 509
Query: 270 NSSSQPTTGSSTLGVTHLRRGSS 338
++ P ST + G++
Sbjct: 510 LTTPSPNPSQSTSSLESSTSGAT 532
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 33.5 bits (73), Expect = 0.098
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 90 FIISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRR 269
F ++ TS +T+P+ S + + SS S + P S LT+ P P++ + +
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 270 NSSSQPTTGSSTLGVTHLRRGSS 338
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 33.5 bits (73), Expect = 0.098
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 90 FIISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRR 269
F ++ TS +T+P+ S + + SS S + P S LT+ P P++ + +
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 270 NSSSQPTTGSSTLGVTHLRRGSS 338
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 44 PKLVTCDVI*TRNLLIHHQRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPTHR 223
PKL I ++++HH+ + F P IL + V+ ++A + S P +PT +
Sbjct: 204 PKLDEEAPIAVESVVVHHEDVAEFDTTPPPILEREDDGPPVLIREAPVRKSNRPMKPTQK 263
Query: 224 A 226
A
Sbjct: 264 A 264
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 44 PKLVTCDVI*TRNLLIHHQRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPTHR 223
PKL I ++++HH+ + F P IL + V+ ++A + S P +PT +
Sbjct: 204 PKLDEEAPIAVESVVVHHEDVAEFDTTPPPILEREDDGPPVLIREAPVRKSNRPMKPTQK 263
Query: 224 A 226
A
Sbjct: 264 A 264
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTA-SSRRN 272
++ +S TT P S SS ++P + + ++ P PTA + + SS
Sbjct: 712 VNQGSSSVTTQPPASSRSTASQGSSSAQPIASSSTMGSTAGSSSPQPTASSTSVPSSTGA 771
Query: 273 SSSQPTTGSSTLGVTHLRRGSS 338
+SS T GSST+G T SS
Sbjct: 772 TSSGSTVGSSTMGSTQSSLPSS 793
Score = 30.7 bits (66), Expect = 0.69
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 96 ISASRTSATTIP---AFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSR 266
+ ++ S+TT P + SQ+ + S S S +T P P + TAS +
Sbjct: 676 VQTTQVSSTTSPVASSSSQMTSTQQPSGSSSSIGSTVNQGSSSVTTQP-PASSRSTAS-Q 733
Query: 267 RNSSSQPTTGSSTLGVT 317
+SS+QP SST+G T
Sbjct: 734 GSSSAQPIASSSTMGST 750
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 174 SKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPT---TGSSTLGVTHLRRGSS 338
S AS Q S TA PG + T +S + SSS T TGS+T+ T + +GSS
Sbjct: 925 STSASSSTQPIASSTTANPGSSTSGPTIASTQGSSSTQTNSNTGSTTVATT-VTQGSS 981
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 RRDLNTQSSDSSSAHQELRL---PQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPR 225
++D S D S + +EL + PQ+P RR +++ TA + R + A++ PR
Sbjct: 817 KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 RRDLNTQSSDSSSAHQELRL---PQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPR 225
++D S D S + +EL + PQ+P RR +++ TA + R + A++ PR
Sbjct: 817 KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 170 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 343
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 15 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 72
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 170 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 343
P + +ST S P +S +YG+ + P F + ++WG T P L T
Sbjct: 120 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 177
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 165 SSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPT 290
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 690 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 731
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 165 SSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPT 290
+S P+ P R ++ PGP+ + SS+ N S PT
Sbjct: 926 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 967
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNS 275
+++S +S+TT+ + +S+ + P+S + T+ GP++ + T SS S
Sbjct: 462 VTSSSSSSTTVTTPTST-----ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-S 515
Query: 276 SSQPTTGSSTLGVTHLRRGSS 338
SS +T SST T ++ S+
Sbjct: 516 SSVSSTASSTQSSTSTQQSST 536
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNS 275
+++S +S+TT+ + +S+ + P+S + T+ GP++ + T SS S
Sbjct: 462 VTSSSSSSTTVTTPTST-----ESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-S 515
Query: 276 SSQPTTGSSTLGVTHLRRGSS 338
SS +T SST T ++ S+
Sbjct: 516 SSVSSTASSTQSSTSTQQSST 536
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +3
Query: 111 TSATTIPAFSQIKARH*QSSHS-KPASQPQQDHRSRLTALPGPTAHNFTASSRR---NSS 278
T+ T P+ S I + Q S S +P + + ++ P PT + + S +S
Sbjct: 1468 TTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQPTVSSTSVPSSTGATSSG 1527
Query: 279 SQPTTGSSTLGVTHLRRGSS 338
S T GSST+G T SS
Sbjct: 1528 SSTTVGSSTVGATQTSVSSS 1547
>AF016684-5|AAB66207.2| 297|Caenorhabditis elegans Hypothetical
protein F45C12.8 protein.
Length = 297
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 345 MDYWRHARSIQAQSRLTADFE 407
+D W+ AR+++A S++T FE
Sbjct: 252 LDQWKRARTLRAHSKMTVPFE 272
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP----TAHNFTASS 263
+S+ R SA +P Q + SH K Q H P P ++H + ASS
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASS 563
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP----TAHNFTASS 263
+S+ R SA +P Q + SH K Q H P P ++H + ASS
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASS 422
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP----TAHNFTASS 263
+S+ R SA +P Q + SH K Q H P P ++H + ASS
Sbjct: 227 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASS 286
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP----TAHNFTASS 263
+S+ R SA +P Q + SH K Q H P P ++H + ASS
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASS 563
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +3
Query: 96 ISASRTSATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP----TAHNFTASS 263
+S+ R SA +P Q + SH K Q H P P ++H + ASS
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASS 422
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 226 FLVLRHTTSLPHHAATVHRSPRPD--HQRLG 312
F V + TT L HH + H SP PD H+ LG
Sbjct: 257 FRVFQTTTYLRHHKSP-HHSPEPDLIHELLG 286
>U80836-1|AAV58889.1| 393|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform a protein.
Length = 393
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 226 FLVLRHTTSLPHHAATVHRSPRPD--HQRLG 312
F V + TT L HH + H SP PD H+ LG
Sbjct: 327 FRVFQTTTYLRHHKSP-HHSPEPDLIHELLG 356
>U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical
protein C14E2.4 protein.
Length = 429
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 402 FEQHWRHARSI*AQPRLTACFEQHWPLQANLSTDNDN 512
F HW + +P+ E+ WP++A DN++
Sbjct: 25 FSSHWEVVEKVNKKPQFVG--EEFWPVEATQMCDNED 59
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 217 SPRFLVLRHTTSLPHHAATVHRSPRPDHQRL 309
SP +V+ H T +P+ TVHR+ P H L
Sbjct: 60 SPPSIVVAHLTKVPNAIGTVHRA-APTHSGL 89
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 237 TAHNFTASSRRNSSSQPTTGSSTLGVTH 320
TAHN ++SS NS+S ++ S+ TH
Sbjct: 59 TAHNTSSSSAGNSTSSSSSSSNYRNTTH 86
>AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical
protein C16C4.13 protein.
Length = 495
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 110 NFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPTHRASW 232
+FG+H P + D+ T VV ++A + A+ G + W
Sbjct: 188 SFGFHLPHVSEDR-TKTGVVEREAKLIAANGKFHSVPKRRW 227
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 237 TAHNFTASSRRNSSSQPTTGSSTLGVTH 320
TAHN ++SS NS+S ++ S+ TH
Sbjct: 59 TAHNTSSSSAGNSTSSSSSSSNYRNTTH 86
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 173 VGRLSMTCFYLRECGDCGSRSS*CADDESEDC 78
+G S R+C D R S C DDE E C
Sbjct: 142 IGAKSTNVCNTRQCIDIAFRLSSCIDDEIEPC 173
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 173 VGRLSMTCFYLRECGDCGSRSS*CADDESEDC 78
+G S R+C D R S C DDE E C
Sbjct: 226 IGAKSTNVCNTRQCIDIAFRLSSCIDDEIEPC 257
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 165 SSHSKPASQPQQDHRSRLTALPGPTAHNFTASSRRNSSSQPTTGSST 305
SS S +S+ ++ H + A H ASS +SSS ++ SS+
Sbjct: 261 SSSSSSSSEDEKHHHKKHAAKKHVKHHKKAASSSSSSSSSSSSSSSS 307
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 151 HVIDSRPTASQHRSLNRTIAADSPRFLVLRH 243
+++D R T H ++ R D+P+F LR+
Sbjct: 515 YMVDGRLTVEAHVNITRVTCLDAPKFKKLRN 545
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 155 SLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 253
+LT V Q +++ G ++ HR WS GTQLH
Sbjct: 54 TLTCVLQDLYLSSCHG-NEYGHRDLWSVGTQLH 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,115,009
Number of Sequences: 27780
Number of extensions: 267033
Number of successful extensions: 1158
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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