Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0157
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    23   3.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   3.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   6.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   6.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   8.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +3

Query: 399 NWIRLLFDHRFIFHSVAMLCIKIDNMFSI 485
           N+   L +HR +F ++ +  + +++ FS+
Sbjct: 323 NYSLQLINHRVVFTAMGLYVLNMEHFFSV 351


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 165 AASREEYDAHAKLVRAEYSKLTQDNYVELRIKVLNQFSQIPKLFHSPEFACFE 323
           A S EE+            +L   NYVE+R  V     ++ K F    F C +
Sbjct: 105 AGSIEEFSRERVEDAYAICELAMYNYVEMRDLVTRPSYRLRKFFDELLFKCMK 157


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 165 AASREEYDAHAKLVRAEYSKLTQDNYVELRIKVLNQFSQIPKLFHSPEFACFE 323
           A S EE+            +L   NYVE+R  V     ++ K F    F C +
Sbjct: 338 AGSIEEFSRERVEDAYAICELAMYNYVEMRDLVTRPSYRLRKFFDELLFKCMK 390


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 165 AASREEYDAHAKLVRAEYSKLTQDNYVELRIKVLNQFSQIPKLFHSPEFACFE 323
           A S EE+            +L   NYVE+R  V     ++ K F    F C +
Sbjct: 338 AGSIEEFSRERVEDAYAICELAMYNYVEMRDLVTRPSYRLRKFFDELLFKCMK 390


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 42  CVSLLTDDEARRCACWQSGPSGPP 113
           CV +  D  A   A W +G +G P
Sbjct: 328 CVQIPWDKNAEALAKWANGQTGFP 351


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 634 KYPSKTYKVFFYKHIIRM*DRKMSFSQKRKSIKSIC 527
           K+ S T  V  Y+ I+    +KM   +K  S  SIC
Sbjct: 373 KFQSITSAVVTYELIVIQFRKKMERDEKPYSRNSIC 408


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 461 DTQHRHTMKYETV 423
           DT H++T KY+ +
Sbjct: 21  DTTHKYTTKYDNI 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,447
Number of Sequences: 336
Number of extensions: 2851
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)