Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0156
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.    25   1.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.4  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   9.5  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   9.5  

>AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.
          Length = 106

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 257 YTKWIPNSVQRQTQIEYTLFQHAS*NTN 340
           Y +W+PN + R   +E  L   AS  TN
Sbjct: 58  YNEWLPNFLGRSYMLEQQLIYPASTATN 85


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 353  WSRTHLYFMMHAGIKYTLFGFAVGPSWGSILYI 255
            WSR   +F   +    TLF  +    W  +LY+
Sbjct: 1047 WSRNRFHFDDVSKAMLTLFTVSTFEGWPGLLYV 1079


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 334 YKCVLDQISSLISQN 378
           Y+C  DQIS+L+  N
Sbjct: 227 YRCFADQISALVRAN 241


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 334 YKCVLDQISSLISQN 378
           Y+C  DQIS+L+  N
Sbjct: 266 YRCFADQISALVRAN 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,025
Number of Sequences: 2352
Number of extensions: 15874
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)