Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0149
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 38 0.007
09_04_0559 + 18516732-18516746,18516893-18517330 36 0.027
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 33 0.33
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 30 1.8
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 30 1.8
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 30 1.8
02_04_0143 + 20172128-20172355,20172452-20173174 30 1.8
01_07_0238 + 42209407-42209964,42210039-42210561,42212577-422126... 30 1.8
07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 29 3.1
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 29 4.1
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 29 4.1
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 4.1
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 29 4.1
11_01_0612 + 4902197-4902929,4903443-4904071 29 5.4
08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715 29 5.4
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 5.4
06_03_0854 + 25400855-25403741,25406174-25407708 29 5.4
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 5.4
05_03_0066 + 7980038-7981468 28 7.2
10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753... 28 9.5
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 28 9.5
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 28 9.5
01_01_0932 - 7363147-7363478,7364336-7364423,7364515-7364604,736... 28 9.5
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 398 PDAEAKSADIKVEEP---AAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNM 568
P AEA S + K EEP AA E +K E +A A ++E KP+ + E
Sbjct: 170 PKAEASSEEAKTEEPKAEAAADEPAKEESKAEAAP-AEEAKPAEPEPEEKTVVVTEEEAA 228
Query: 569 VKKIDLAPNVXSDAAAVPEIKTPEAADAPK 658
K ++ AAA P E A AP+
Sbjct: 229 TKTVEAIEETVVPAAAAPAAAATEEAAAPE 258
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 36.3 bits (80), Expect = 0.027
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQ------PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPN 565
AE K A+ EPAA+ PE ++ E + E++ E +A A+ AA +
Sbjct: 57 AETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEAEAKEAEPAAQVAE 116
Query: 566 MVKKIDLAPNVXSDAAAVPEIKTPEAA 646
VK+ + AP A A E+K EAA
Sbjct: 117 EVKEEEAAP-----APAAEEVKVEEAA 138
Score = 35.1 bits (77), Expect = 0.063
Identities = 30/96 (31%), Positives = 44/96 (45%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 583
AEA+ A+ K EPAA E + EV+ E +P+ +AE + + A P + +
Sbjct: 52 AEAEVAETKEAEPAA-AEPAAEEVK------EAEPEPAEPEAEPAKEEVAPEPAAAAEAE 104
Query: 584 LAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKP 691
A A E+K EAA AP + V+E P
Sbjct: 105 -AKEAEPAAQVAEEVKEEEAAPAPAAEEVKVEEAAP 139
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 32.7 bits (71), Expect = 0.33
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
+++ S D ++ A +P D +TE++ TV ++ E + G D+ + +
Sbjct: 32 ESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDN---VDDSSVH 88
Query: 578 IDLAPNVXSDAAAVPEIKTPEAADA 652
IDL SD A PEI P D+
Sbjct: 89 IDLD---SSDTAFQPEIFDPRCWDS 110
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 509 KPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDK 688
K SA +EGS+ ++P + K+D PN+ I P+ + LA + ++DK
Sbjct: 464 KISAYSSEGSSFIPVVVPRHIPKVDSGPNLSKVLTTDLTIVEPQDIERGGLAVDCGEDDK 523
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEI-SKEEK--PSATDA-EGSADSAAIIPNMVK 574
E++ V AA S+ EV A + SK + SATD+ + SAD A ++P
Sbjct: 552 ESRKESTDVASAAAPKTSSRMEVAPDSAPLLSKAGRRVESATDSRKESADVAPVVPRTTS 611
Query: 575 KIDLAPNVXSDAAA 616
++++AP+ + +A
Sbjct: 612 RMEMAPDSRREISA 625
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P AE +A AA S A A+ S E P A++ + S +IP
Sbjct: 33 PPAEPPAAAAAAVAAAAAAASSAAAAAAQ-AQASSEGSPPASELSPGSLSPVMIPPPRHA 91
Query: 578 IDLAPNVXSDAAAVPEIKTPEA-ADAPKLADNPVDEDKPADI 700
LAP S AA+ E+ E+ + AP A+ + + A+I
Sbjct: 92 DHLAPGSPSPAASPSELGDDESWSRAPSAAELESNNNDLAEI 133
>02_04_0143 + 20172128-20172355,20172452-20173174
Length = 316
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 583
+E ++ + E AA+PE ++ E+++EEK D+ A +A+ P+ D
Sbjct: 233 SEQETTGEEAEAAAAEPEAAQEGGGGGAQEVAEEEKRVDPDSVQVAAAASSTPSPPSSAD 292
Query: 584 LAPNVXSDAAAVPEIKTPEAAD 649
S A ++ P A D
Sbjct: 293 DDEEEKSKEEAAADVSAPAAPD 314
>01_07_0238 +
42209407-42209964,42210039-42210561,42212577-42212665,
42212981-42213191,42213265-42213446,42213573-42213812,
42214691-42214878,42215230-42215323,42215407-42215463,
42215552-42215686,42216460-42216525,42216745-42216858,
42217849-42218010,42218093-42218221,42218323-42218424,
42219428-42219504,42219600-42219957
Length = 1094
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 515 SATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADA 652
SA A GSAD AA + L PN+ S +++P E+A A
Sbjct: 83 SALQAAGSADPAAASALASLLVILLPNIPSSPSSLPPASASESASA 128
>07_01_0513 +
3828196-3828309,3828408-3828722,3828823-3828879,
3829668-3829826,3829918-3830028,3830173-3830259,
3830359-3830591,3830808-3830886,3831173-3831316,
3831529-3831568,3831667-3831729,3832193-3832224,
3832320-3832361,3832444-3832557
Length = 529
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTE--VQATVAEISK--EEKPSAT 523
E++S DIK + +AQP +K E VQAT++ + K EEK T
Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCT 436
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 410 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII 559
A+ D E+ E+ + EVQ V E +P DAEG+A A ++
Sbjct: 255 AQDGDDVEEQKGEGEEEMEEEVQVEVQEKRGRGRPRKADAEGNALQARVL 304
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/97 (23%), Positives = 37/97 (38%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 583
A A+ + PA +T + A + +E + T SA S ++ D
Sbjct: 155 AAARKVEEAAPTPATLRRSQRTAARKAAAPVVEEVTATKTTTRRSARSKVMV-------D 207
Query: 584 LAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPA 694
L V A A+ E+K E +D DE++ A
Sbjct: 208 LEQEVEDMAVALQEVKVQEEDPKDVASDEKCDEEEEA 244
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 437 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEG 535
EP A PE + + Q + +K+ PSA D +G
Sbjct: 132 EPPAPPEPKQQQQQQQAGDAAKQAAPSADDEDG 164
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +2
Query: 464 KTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEA 643
+T++ E+ K + AT D+ + K++ + S AAA P +P A
Sbjct: 150 ETKLGKVQDELKKLREQLATAEAAKKDAQVALEEAKKRVGTKGSPASAAAASPRSPSPVA 209
Query: 644 ADAPKLADNPVDEDKP 691
+ PK + + +P
Sbjct: 210 VETPKKTEQQLKVTEP 225
>11_01_0612 + 4902197-4902929,4903443-4904071
Length = 453
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 545 SAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLAD 667
+AA PN V ID+ AAA P + PEAA P L D
Sbjct: 25 AAAAAPNQVA-IDVVVVHHHGAAAAPGQQAPEAAPVPHLLD 64
>08_02_1031 - 23796755-23797171,23797243-23797595,23797676-23797715
Length = 269
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI 580
D +A A+IK + ED+ A+ + + +EE P+A+DA+ A A P +
Sbjct: 124 DKDALLAEIKELKGKLGDEDAA----ASFSSVKEEEDPAASDADPPATGA---PQGSSES 176
Query: 581 DLAPNVXSDAAAVPEIKTPEAA 646
D + V +DA +P P AA
Sbjct: 177 D-SSAVLNDAEILPHKPAPAAA 197
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Frame = +2
Query: 530 EGSADSAAIIPNMVKKIDL-------APNVXSDAAAVPEIKTPEAADAPKLADNPVD--E 682
+GSA S I N + ++L AP + S AVP P A D P LAD P + E
Sbjct: 82 DGSAASFGISINHTRALELPGVCKVQAPPI-SQCTAVPT--PPPAPDTPTLADEPAETNE 138
Query: 683 DKPA 694
D+P+
Sbjct: 139 DEPS 142
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 485 VAEISKEEKPSATDAEGSADSAAIIPN----MVKKIDLAPNVXSDAAAVPEIKTPEAA 646
V + PSA A A + ++ PN V LAP + AAA P + P AA
Sbjct: 609 VVTVGAPPPPSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAAAAAAPAVAPPAAA 666
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Frame = +2
Query: 275 PAIPEAKK--------DDIAPEDSDIXXXXXXXXXXXXXXXXXXXXXXIPDAEAKSADIK 430
P IPE+K+ + +P++ DI +P++ + + DIK
Sbjct: 1272 PQIPESKELSQQSKILPESSPDNHDIKCEYSSPTPIPESKELSLQSKILPESSSDNQDIK 1331
Query: 431 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDA 610
E+P+ P EV + ++I E D E S+ +I + +LA ++
Sbjct: 1332 CEDPSPTPISKSKEV-SPQSKILSESYLDNQDVERECPSSILI---TESKELAVDLPGSI 1387
Query: 611 AAVPE 625
+ PE
Sbjct: 1388 SLAPE 1392
>05_03_0066 + 7980038-7981468
Length = 476
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
+ K + KVE + E SK E+ + E SKEE S A+SA+ + +KK
Sbjct: 394 DRKLKEKKVESNSTVTEKSK-ELTSRETEESKEELTSRKTDANDAESASSVAEAIKK 449
>10_07_0091 -
12774590-12774664,12774971-12775134,12775249-12775382,
12775463-12775556,12775650-12775758,12776055-12776103,
12778336-12778376,12779539-12779571,12779665-12779754,
12780474-12780507,12781218-12781510,12781859-12782057,
12782129-12782289,12783130-12783282,12783545-12783715,
12783822-12783921,12784023-12784111,12784192-12784290,
12784406-12784676,12784764-12784961,12785041-12785140,
12785799-12785931,12786016-12786277,12787106-12787155
Length = 1033
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 264 TTRYPLYQRPKRTI*PQKTPISRNRKPFLK 353
T RYP+Y R ++T P+K S N+ LK
Sbjct: 818 TIRYPMYTRNQKTFRPKKNAPSGNKGVQLK 847
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSA 550
D + K++ +K EE + SKTE A + KEEK A D+ +A++A
Sbjct: 1268 DPDFKNSYLKKEE-STDDASSKTEETTNNASLQKEEK--ANDSSKNAENA 1314
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAE-GSADSAA 553
++E ++ D++ +E A + E+ + E +A E E+K DAE G+A+ A
Sbjct: 70 ESEGEAMDVEAKESADEKEEEEAEAEADGDE--GEDKSDEMDAEAGAAEEEA 119
>01_01_0932 -
7363147-7363478,7364336-7364423,7364515-7364604,
7364709-7364813
Length = 204
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 437 EPAAQPEDSKTEVQATVAEISKEE-----KPSATDAEGSADSAAIIPNMVKKIDLAPNVX 601
EP A+ T + V E KEE +P+A AE +A S ++ KK + P
Sbjct: 137 EPEAEAAAETTSREVAVEEEKKEEEAAPAEPAAAAAEAAAPSTEVVEE--KKEEEKPAEA 194
Query: 602 SDAAAVPE 625
+ AA PE
Sbjct: 195 AAPAAEPE 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,146,255
Number of Sequences: 37544
Number of extensions: 227013
Number of successful extensions: 786
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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