Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0149
(772 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 37 0.021
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 34 0.15
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061) 31 0.78
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 1.0
SB_20305| Best HMM Match : PT (HMM E-Value=1.8) 31 1.0
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 30 1.8
SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07) 30 2.4
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 29 3.1
SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0) 29 3.1
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 29 3.1
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 4.2
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 29 4.2
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 28 7.3
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 28 7.3
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7) 28 9.6
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 28 9.6
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKP-SATDAEGSADSAAIIPNMVKKI 580
A + A++ +EE Q ED++ V+ A + K E P T+A D A K +
Sbjct: 1172 ASVEEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAP-AEKTEKPV 1230
Query: 581 DLAPNVXSDAAAVPEIKTP--EAADAPKLADNPVDEDKPAD 697
+ P+V A V E + P EA + A++P ++ P +
Sbjct: 1231 EAGPSVQEAEAPVKETERPVEEAEVQAEEAESPAEKGAPVE 1271
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +2
Query: 395 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATD-AEGSADSAAIIPNMV 571
+P +A ++ + E PAA+PE + E +A V + + EE + + AE D
Sbjct: 590 VPIEDADTSTEEAESPAAEPEVAVKEAEAPVEDDAFEEPEALNEKAEDPKDEDETQEEKA 649
Query: 572 K-KIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDK 688
+ ID A + A E K E + + V+EDK
Sbjct: 650 EVPIDEA-EAEAQAEVAGEEKALEEEAETLVEETKVEEDK 688
Score = 29.1 bits (62), Expect = 4.2
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
+ K D EE A P D + E +A AE++ EEK +AE + + + +
Sbjct: 637 DPKDEDETQEEKAEVPID-EAEAEAQ-AEVAGEEKALEEEAETLVEETKVEEDKAPIQEA 694
Query: 587 APNVXSDAAAVPEIKTP-----EAADAPKLADNPVDE-DKPA 694
+V A V EI+ P E K D PV E + PA
Sbjct: 695 EASVKKAEATVEEIEAPIERAKEVEAQSKEVDAPVKEAEAPA 736
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 36.7 bits (81), Expect = 0.021
Identities = 29/95 (30%), Positives = 42/95 (44%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P EA+S D KVE P + E + EV+ATV E+ + +A E A +P ++K
Sbjct: 24 PIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPMEEAAASVE-----EAEVP--IEK 76
Query: 578 IDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDE 682
+ P E EA A + + PV E
Sbjct: 77 AETQPVDTEGPVENAETSFEEAEAADEETEEPVKE 111
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = +2
Query: 434 EEPA--AQPEDSKTEVQATVAEISKEEK--PSATDAEGSADSAAIIPNMVKKIDLAPNVX 601
E+P+ +P + K +++A E + + K P A G D+ P V
Sbjct: 85 EKPSLDTKPAEDKPKIEAAKQEATADNKAEPKKEQASGIKDAPEATPKKGADKATPKEVE 144
Query: 602 SDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 697
+ V + +A K NP EDKPA+
Sbjct: 145 ASGDEVASEAEAKPVEAAKTESNPAKEDKPAE 176
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E ++ D+ +EP + E +A+ E K T+ A+ P +K+
Sbjct: 173 EEENPDVPSDEPLTGGTEEDDEKEASEEEEGKPSLEDGTEDTPEANKTPEEPKEDEKVTE 232
Query: 587 APNVXSDAAAVP----EIKTPEAADAPKLADNPVDEDKPAD 697
+ V E++ P+ ++PK D P +ED P +
Sbjct: 233 EETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKE 273
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +2
Query: 410 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 589
AKS D+K E A++ ++ T+ ++ K+ KP++ + A +A + N K +++
Sbjct: 1912 AKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNFEKTVNVD 1971
Query: 590 PNVXSDAAAVPEI 628
S +P +
Sbjct: 1972 VESQSSERELPRV 1984
>SB_53221| Best HMM Match : zf-CCHC (HMM E-Value=0.061)
Length = 410
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAAQPEDSKT----EVQATVAEISKEEKPSATDAEGSADSAAIIP 562
DAE S+ I V P+AQ E +T V + +A ++ E D+ D AIIP
Sbjct: 285 DAEPASSSISVSVPSAQAEQGRTTEGRPVSSDIATVAMEVPEVQGDSLADVDIDAIIP 342
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +2
Query: 431 VEEPAAQPEDSKTEVQATV--AEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
+E PA ED KT+ +AT AE+ +E KP+A D + SA S ++ I+++P
Sbjct: 1129 LESPA---EDVKTDFEATSLEAEVFEEYKPTAKDVKESASSTV---HLAADIEISP 1178
>SB_20305| Best HMM Match : PT (HMM E-Value=1.8)
Length = 127
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKID 583
+E KS D ++P +PED + E E+KP + D P K++
Sbjct: 25 SEDKSGDKPQDKPENKPEDQPEDKPGDKPEDKTEDKPEDKPEDKPEDKPEDKPE--DKLE 82
Query: 584 LAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPAD 697
P S+ PE PE D P+ EDKP D
Sbjct: 83 DKPEDSSEEK--PE-DNPE--DKPEYKPEDKPEDKPED 115
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 574
P+A +A + E AQPE K T + ++ E P AT A+ A A +P
Sbjct: 371 PEAPDATAQPEATETTAQPEAPKATALPEAPKATAQPEAPEAT-AQPEAPKATALPE-AP 428
Query: 575 KIDLAPNVXSDAAAVPEIKTPEAADAPKLADNP-VDEDKP 691
+ P A K +AP+ P ED P
Sbjct: 429 EATAQPEATETTAQPKAQKATAQPEAPEATAQPEAPEDNP 468
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISK-EEKPSATDAEGSADSAAIIPNMVK 574
P+A +A + + AQPE ++T Q + + E P AT A+ A A P K
Sbjct: 362 PEAPDATAQPEAPDATAQPEATETTAQPEAPKATALPEAPKAT-AQPEAPEATAQPEAPK 420
Query: 575 KIDL--APNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKP 691
L AP + A P+A A + P +P
Sbjct: 421 ATALPEAPEATAQPEATETTAQPKAQKATAQPEAPEATAQP 461
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 395 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIP 562
+P+A +A + E AQPE K E + + + + T A+ A A P
Sbjct: 397 LPEAPKATAQPEAPEATAQPEAPKATALPEAPEATAQPEATETTAQPKAQKATAQP 452
>SB_14171| Best HMM Match : Chitin_synth_2 (HMM E-Value=7.7e-07)
Length = 1188
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAA 553
PD +A + + + + P +Q EDS + T +S EE+P ++ S SAA
Sbjct: 915 PDPQAPATNNQTDNPPSQYEDSSS--SETNGVLSDEEQPPLPLSDSSIQSAA 964
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.5 bits (63), Expect = 3.1
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 11/143 (7%)
Frame = +2
Query: 281 IPEAKKDDIAPEDSDIXXXXXXXXXXXXXXXXXXXXXXIPDAEAKS-ADIKVEEPAAQ-P 454
+P D + P SD+ ++ KS +D +V P++ P
Sbjct: 591 VPTTSDDQVTPSASDVPTTSDDQVTPSASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVP 650
Query: 455 EDSKTEVQATVAEISKEEK----PSATDAEGSAD-----SAAIIPNMVKKIDLAPNVXSD 607
S +V + +++ PSA+D ++D SA+ +P + P+
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSASDVP-AASDNQVTPSASDV 709
Query: 608 AAAVPEIKTPEAADAPKLADNPV 676
+A + TP A D P +DN V
Sbjct: 710 PSASDDQVTPSAIDVPTTSDNQV 732
>SB_8334| Best HMM Match : MIB_HERC2 (HMM E-Value=0)
Length = 636
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAA-QPEDSKT-EV---QATVAEISKEEKPSATDAEGSADS 547
D + S+D +E A +P S T EV T A + EE+PS TD EGS +
Sbjct: 365 DPTSSSSDQLIEHSVAGRPSPSVTPEVAREDCTQASLQLEERPSNTDGEGSGQT 418
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +2
Query: 434 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 613
++P +PED + E E+KP A + D +P K + P +
Sbjct: 150 DKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPE--DKPEYRPEYKPEDK 207
Query: 614 AVPEIKTPEAADAPKLADNPVD--EDKPAD 697
PE K PE K D P D +DKP D
Sbjct: 208 --PE-KKPEKKPEDKSEDKPEDKHKDKPED 234
Score = 28.3 bits (60), Expect = 7.3
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
+AKS D + P PED K E + K EK E ++ + K D
Sbjct: 177 KAKSEDKPEDMPEDMPED-KPEYRPEYKPEDKPEKKPEKKPEDKSEDKPEDKHKDKPEDK 235
Query: 587 APNVXSDAAAVPEIKTPEAADAPKLADNPVD--EDKP 691
+ D PE K D P D EDKP
Sbjct: 236 LEDKPEDKKEEKPEDNPEEKPEDKQEDKPEDKQEDKP 272
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAA-QPEDSK-TEVQATVAEISKEEKPSA-TDAEGSADSAAIIPNMV 571
D E K + + E+ + E +K TEVQ V E +KEE PS DAE A + ++
Sbjct: 1031 DKERKVKEKEEEQKVKIEKEPNKVTEVQLMVEETNKEESPSTDRDAESELPKAGSVSALL 1090
Query: 572 KKIDLAPN 595
P+
Sbjct: 1091 SVFATEPS 1098
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 410 AKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 541
AK+A+ + E+ A PE+ E A E K ++ D EG+A
Sbjct: 58 AKAAEAQPEKKAEAPEEKPAEDSKDQAVEESETKDASKDGEGNA 101
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 28.3 bits (60), Expect = 7.3
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +2
Query: 434 EEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAA 613
++P +PED+ + E E KP + S D P K D + D
Sbjct: 3 DKPEDKPEDTPEDKPEDKPEGKPEGKPEGKPKDKSGDKPEDKPEN-KPEDQPEDKPGDK- 60
Query: 614 AVPEIKTPEAADAPKLADNPVD--EDKPAD 697
PE KT + + K D P D EDKP D
Sbjct: 61 --PEDKTEDKPE-DKPEDKPEDKPEDKPGD 87
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK--I 580
+ + D K++ E + ++ + + E S ++E S +++A K
Sbjct: 98 QTRIQDAKMDSEIVSKESERKKLSPEIGD-GIREVASEENSEKSIETSAASETATKSPST 156
Query: 581 DLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 700
+ + SD V EI + + D+ K++ NP D +P D+
Sbjct: 157 ENTGSTKSDKDDVVEISSDD--DSDKISANPTDVQEPMDL 194
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Frame = +2
Query: 434 EEPAAQPE-----DSKTEVQATVAEISKEEKPSATDAEGSADSAAI----IPNMVKKIDL 586
EEP PE D K E SK ++ + A + +P VK++
Sbjct: 288 EEPNTDPEEKEGPDEKENADEVFQERSKLDRSPPLRKKHEPFVAPLDDTPVPEPVKEVPA 347
Query: 587 APNVXSDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 700
P + +K P A AP P D DKPA +
Sbjct: 348 RPVTKQEPFKQTKPVKEPSLAPAPTANMVPSDRDKPAGL 386
>SB_32822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 285 QRPKRTI*PQKTPISRNRKPFLK*NPKKKSRKQNHPRFPMLKQN 416
+R I P K PISRN+ F + + KK+ + + + +K +
Sbjct: 1005 ERLVEQIKPLKDPISRNKLAFFETSSKKRKKSKGQQQLSSMKSD 1048
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +2
Query: 437 EPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAA 616
+PA+QP A+ +P++ A A A P A S A+
Sbjct: 46 QPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQPAS 105
Query: 617 VPEIKTPEAADAPKLADNPVDEDK 688
P ++ A + P++ + V E K
Sbjct: 106 QPASQSASAQNKPRIVEKEVLEKK 129
>SB_16403| Best HMM Match : Candida_ALS (HMM E-Value=1.7)
Length = 2372
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 455 EDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK--KIDLAPNVXSDAAAVPEI 628
ED+ + +A V E + KPS + + + D A P + + + P + +
Sbjct: 1418 EDANVQAKADVVEPVQAVKPSQANDKTADDDACEPPRSPRAFTLPITPVHLEPSPSTSRQ 1477
Query: 629 KTPEAADAPKLADNPVDE 682
+TP A + AD+ DE
Sbjct: 1478 RTPLLRQADRTADSDSDE 1495
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/57 (24%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 416 SADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAII--PNMVKKI 580
SA + A++ D ++++ + A+ K+E+ SAT + ++S+ ++ P+ ++KI
Sbjct: 196 SATHRTLSAASRDLDKRSDISLSSAKPEKQEQESATVEQPESESSTMVLYPHQIQKI 252
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 428 KVEEPAAQ-PEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXS 604
KVE+P + PE K EV+ V+ KP G + P V+ ++ AP
Sbjct: 1027 KVEKPEVEEPEVEKPEVEEPVSG-----KPEVETPVGEVPQEVLAPVTVEVVETAPITLE 1081
Query: 605 DAAAVPEIKTPEAADA 652
D P + P+ DA
Sbjct: 1082 DMK--PTGEAPKVVDA 1095
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,225,554
Number of Sequences: 59808
Number of extensions: 273957
Number of successful extensions: 1452
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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