Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0149
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 36 0.042
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 36 0.042
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 36 0.042
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 36 0.042
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 34 0.13
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 31 0.91
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.6
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.1
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical ... 29 2.8
Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 29 4.8
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 29 4.8
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 6.4
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 6.4
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 28 6.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 28 6.4
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 28 6.4
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 28 6.4
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 28 6.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 28 6.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 28 6.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.4
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 28 6.4
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 28 6.4
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 28 8.5
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 28 8.5
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 8.5
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 35.5 bits (78), Expect = 0.042
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P A SA + A+ P+ EVQ V + S SA +E S SA +P +
Sbjct: 56 PGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEA 114
Query: 578 IDL--APNVX--SDAAAVPEIKTPEAADAPKLADNPVDED 685
D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 115 QDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 35.5 bits (78), Expect = 0.042
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P A SA + A+ P+ EVQ V + S SA +E S SA +P +
Sbjct: 93 PGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEA 151
Query: 578 IDL--APNVX--SDAAAVPEIKTPEAADAPKLADNPVDED 685
D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 152 QDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 35.5 bits (78), Expect = 0.042
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P A SA + A+ P+ EVQ V + S SA +E S SA +P +
Sbjct: 93 PGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEA 151
Query: 578 IDL--APNVX--SDAAAVPEIKTPEAADAPKLADNPVDED 685
D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 152 QDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 35.5 bits (78), Expect = 0.042
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P A SA + A+ P+ EVQ V + S SA +E S SA +P +
Sbjct: 93 PGAPEASAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEA 151
Query: 578 IDL--APNVX--SDAAAVPEIKTPEAADAPKLADNPVDED 685
D P+ SDA+A + PEA +AP++A +DE+
Sbjct: 152 QDAQDVPDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 33.9 bits (74), Expect = 0.13
Identities = 27/100 (27%), Positives = 37/100 (37%)
Frame = +2
Query: 395 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVK 574
+P+ A E PA P +T A AE + P+A + +A +A P
Sbjct: 548 VPEETPAPAPAADETPAPAPAAEETPAPAPAAEETPAPAPAAEETPATAPAAEETPAPAP 607
Query: 575 KIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPA 694
D P + A A E P A A P E+ PA
Sbjct: 608 AADETP---APAPAAEETPAPAPAVEETPAPAPAVEETPA 644
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/99 (26%), Positives = 35/99 (35%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
P E A E P + E A VAE + P+A + A +A P
Sbjct: 637 PAVEETPAPAPAAEETPAPAPAAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPA 696
Query: 578 IDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPA 694
+ P + AA P A +AP A P + PA
Sbjct: 697 AEETP-ASAPAAEETPAPAPAAEEAP--APAPAAPETPA 732
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Frame = +2
Query: 398 PDAEAKSAD--IKVEEPAAQPEDSKTEVQATVAEISKEEKPSA--TDAEGSADSAAIIPN 565
P AE A + AA DS AT S E +A TD+ SAD+ A + +
Sbjct: 289 PTAEETPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVD 348
Query: 566 MVKKIDLAPNVXSDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 700
A + + A + +T A P +AD D P+ I
Sbjct: 349 TSSSEHAAESTEAPATDIAATETTPAPSVPAPVADAAAGYDSPSSI 394
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 33.5 bits (73), Expect = 0.17
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 413 KSADIKVEEPAAQPEDSK-TEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLA 589
KSA K+ P+ + ED++ T+ A+ E S + KP T E SAD + ++ + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 590 PNVXSDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 697
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 31.1 bits (67), Expect = 0.91
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E +A+ K +EPAA E+ K + V E KEE P++ +E D + K
Sbjct: 140 EVVAAEEK-KEPAAVVEEKKEVPETPVVEDKKEEAPAS--SEEKKDEPVVNTEEKKDAAE 196
Query: 587 APNVXSDAAAVPEIKTPEAADAP 655
AP ++ A E K E AP
Sbjct: 197 APAADEESEAAEE-KVAETTVAP 218
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 431 VEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKK 577
VEEP P KT + A + PSA + GS+ + N +KK
Sbjct: 235 VEEPIPPPNTRKTLLGEPPAGAASSSSPSAQSSTGSSTGTSSYQNNIKK 283
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = +2
Query: 413 KSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
KSA K ++ + + E+ + + + + + SK K +A+D + + A + K P
Sbjct: 191 KSAKSKDDDSSDEEEEEEVK-EKSPKKSSKSTKRAASDDDEEEEPVATKKSKKSKRAETP 249
Query: 593 NVXSDAAAVPEIKTPEAADAPKLADNPVDEDK 688
D +KTP+ K A+ P +ED+
Sbjct: 250 EEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 572 KKIDLAPNVXSDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 700
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 506 EKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLADN-PVDE 682
EKP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 280 EKPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADS 339
Query: 683 DKP 691
P
Sbjct: 340 TTP 342
>AF045643-3|AAC02591.1| 272|Caenorhabditis elegans Hypothetical
protein F58H7.5 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +2
Query: 419 ADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNV 598
A+++VEE P+DS E + +AE K++ S + E + L V
Sbjct: 93 AEMEVEE-VDSPQDSPDEFEEDIAEEVKDKSASEEEEEDEHQVFQFENPRDLEDPLRRRV 151
Query: 599 XSDAAAVPEIKTPEAADAP-KLADNPVDEDKPADI 700
+ + P DAP ++A NPVD++ DI
Sbjct: 152 PYEIHF--PFREPPQEDAPMRMAQNPVDQEAIDDI 184
>Z83239-9|CAB05811.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 449 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 410 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 587 APNVXSDAAAVPEIKTPEAA 646
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z81099-4|CAB03189.1| 517|Caenorhabditis elegans Hypothetical
protein K08F9.4 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 449 QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAP 592
+ E+ + E+Q A+ S+ E PS++ S+DS + KK +AP
Sbjct: 24 EEEEEEEEIQPGPADSSESENPSSSSDSSSSDSDSDSDAAPKKNIIAP 71
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +2
Query: 422 DIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVX 601
DIK + A + ++ +T+ + + +E K + D+ P K N+
Sbjct: 235 DIKAFQ-AEKSKEIETKKNEEMEKKQEEPKVKPVPPGTTPDTTTTTPEKKSKSITDSNIK 293
Query: 602 SDAAAVPEIKTPEAADAPKL 661
+ +PE +TPEA P +
Sbjct: 294 PELDEIPEARTPEAEGPPMM 313
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 446 AQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPNVXSDAAAVPE 625
A+P D + A A K + + G ADS P K D +P A VP+
Sbjct: 570 AKPRDPSPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEKSKPRDPSPKKAVPAKPVPK 629
Query: 626 IK-TPEAADAPKLADNPVD 679
+ P A P+ P D
Sbjct: 630 TEVAPAAVKKPEPISKPKD 648
Score = 27.9 bits (59), Expect = 8.5
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Frame = +2
Query: 398 PDAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAI------I 559
P+ AKS D ++ A+P +S V K+ KP D + A+ +
Sbjct: 761 PEPVAKSRDPSPKKAKAEP-NSPVVPPTPVKNPVKKWKPPWEDDDAPAEPVNVPEPEKKT 819
Query: 560 PNMVKKIDLAPNVXSDAAAVPEIKTPEAADAPKLA-DNPVDEDKPAD 697
P + KK + P S AVP K DAP ++ P KP +
Sbjct: 820 PVLAKKTPVKPRDPSPKKAVP-AKPSTKTDAPPVSVKKPEPVSKPKE 865
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 410 AKSADIKVEEPAA-QPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
AK ++ EE AA + E +K V+ + E + S DS + PN DL
Sbjct: 99 AKVVEVTDEEAAAFEKEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADL 158
Query: 587 APNVXSDAAAVPEIKTPEAA 646
A + E+K P AA
Sbjct: 159 AKYQWTQTLQELEVKIPIAA 178
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 587 APNVXSDAAAVPEIKTP 637
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 587 APNVXSDAAAVPEIKTP 637
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 224 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 278
Query: 587 APNVXSDAAAVPEIKTP 637
AP V ++ ++ E TP
Sbjct: 279 AP-VSTNKSSDDEPSTP 294
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 407 EAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKIDL 586
E K + I V+E KTE + E + +K TD++GS + KK+ +
Sbjct: 763 EVKESTISVKEKNGTESGIKTEFKMEKRERTTLQKYEKTDSDGSKKE-----DKPKKVSI 817
Query: 587 APNVXSDAAAVPEIKTP 637
AP V ++ ++ E TP
Sbjct: 818 AP-VSTNKSSDDEPSTP 833
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 113 VSLAMPVAEEKDVVPAQPIL 172
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 113 VSLAMPVAEEKDVVPAQPIL 172
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1002 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1046
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 363 KKKSRKQNHPRFPMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKF 497
K S KQN PR + +Q L++ K K+ L L + + +L S+ +
Sbjct: 1125 KGMSGKQNQPRKKVYEQALMVRKVKSYLEGLHVVDNEMELDSMSY 1169
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +2
Query: 404 AEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSADSAAIIPNMVKKI- 580
+ K+AD + PA P + + +A P+A D + + +P +
Sbjct: 46 SSTKAADQQPAAPAPAPASVQQQPEAPAPA------PTAPDVQQPGPAPVPVPEPAQLAP 99
Query: 581 DLAPNVXSDA-AAVPEIKTPEAADAPKLADNPVDEDKPADI 700
AP DA AA P +TP+ A AP+ + PA +
Sbjct: 100 QSAPEPTPDAPAAAPVQETPQVAPAPETPAPAPETPAPAPV 140
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 113 VSLAMPVAEEKDVVPAQPIL 172
V++ +PVA EKDV+PA+ +L
Sbjct: 317 VTVVIPVASEKDVLPARKLL 336
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 113 VSLAMPVAEEKDVVPAQPIL 172
V++ +PVA EKDV+PA+ +L
Sbjct: 515 VTVVIPVASEKDVLPARKLL 534
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 401 DAEAKSADIKVEEPAAQPEDSKTEVQATVAEISKEEKPSATDAEGSA 541
+A A+ A + EEP A E++ E + +EEKP A E A
Sbjct: 28 EAAAEDAAAEEEEPEAAEEEAPVEEKPKPRPPVQEEKPPAEMTEAEA 74
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 500 KEEKPSATDAEGSADSAAIIPNMVKKI-DLAPNVXSDAAAVPEIKTPEAADAPKLADNPV 676
+ E+ S +EG++ +I P KKI D+AP D + + + ++ P +A+ P
Sbjct: 188 RRERQSPVYSEGTSSEKSISPPPAKKIKDMAP-ALPDYSVISKPNLLQSLIFPMIAEQPS 246
Query: 677 DEDKP 691
P
Sbjct: 247 TSQSP 251
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 399 PMLKQNLLILKWKNQLLSLKIQKLKYKLPSLKFQ 500
P L N+LI WK + K ++ KY + LK Q
Sbjct: 199 PKLSLNVLISMWKKEFSDWKDEEFKYFIDFLKSQ 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,075,430
Number of Sequences: 27780
Number of extensions: 198397
Number of successful extensions: 787
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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