Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0147
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.34 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   0.79 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   0.79 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   1.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   7.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   7.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   9.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    20   9.7  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 125 FSGMQMYKPQLILSPMTIIFGGYLGSL 205
           +    +Y PQ++LSP     GGY GSL
Sbjct: 112 YDQQHLYHPQVLLSP-----GGYSGSL 133


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +1

Query: 190 LSWFINVHVLCNCCW*PRDNSVW*SIPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLR 369
           L  FI   VLC  C  P          +  T+ STI      C +H P +  H +  F+ 
Sbjct: 3   LDGFIRKFVLCPECENPETEL------LVSTKRSTISQGCKACGYHSPLESNHKLVTFIL 56

Query: 370 DN 375
            N
Sbjct: 57  KN 58


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 38  HKLLQIKYGKMA-VNSATSFVLSSILTLLIFSGMQMYKPQLILSPMTIIF 184
           +K   + Y K+  V +   FV+  ILT++ F       P  ++   TI F
Sbjct: 27  YKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKRSALSPFELIQIRTINF 76


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 323 GMVHRICFTTCLIFCVITIYY 385
           G++  + FT+  IF V++I+Y
Sbjct: 234 GLILLLMFTSHFIFIVVSIFY 254


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -2

Query: 123 IKRVNIDDSTKDVALFTAILPYFIWSNLCQLVFL 22
           I + N+     DV +F  +  + +W  +   +FL
Sbjct: 138 IIKKNVTQQNSDVFIFDNVWLFILWVGILSTIFL 171


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 160 TVSYDYNIRRLSWFINVHVLCNCCW*PRDNSV----W*SIPIEITRSSTIDG 303
           T S   N  R S F N     N C+ PR+NS+    +   P E  RS+ IDG
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSP-ESNRSNEIDG 431


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 163 VSYDYNIRRLSWFINVHVL 219
           + Y  N RR+S F+N+ +L
Sbjct: 113 LGYSINYRRISIFVNLAIL 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 265 IPIEITRSSTIDGNIIDCCWHGPQDLFHHMPHFLRDNHLL 384
           + + IT    I GNI    W+ P++    +P+ +   H+L
Sbjct: 139 LAMTITGPLVIIGNIAMELWNMPRENIEPLPNVILACHML 178


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 87  VALFTAILPYFI 52
           +   T ILPYFI
Sbjct: 179 IVFMTVILPYFI 190


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 87  VALFTAILPYFI 52
           +   T ILPYFI
Sbjct: 179 IVFMTVILPYFI 190


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 103 RQYEGRGTVYRHFAVF 56
           R  E RGT+  HFA +
Sbjct: 234 RYDETRGTMLSHFAYY 249


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 197 GSLMFMFFVTAVGNLETILFGKAFQLKLPEVVLSMGIS 310
           GS     +VT     +  +F ++  L++ E + + GIS
Sbjct: 91  GSHFIESYVTGNALYQVFVFRRSIYLQIKERLKTQGIS 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,260
Number of Sequences: 336
Number of extensions: 2102
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)