Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0145
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10) 38 0.009
SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 34 0.11
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 34 0.11
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 32 0.42
SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9) 31 0.56
SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3) 31 0.98
SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 30 1.7
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 30 1.7
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46) 29 3.0
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 29 3.0
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_41986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 5.2
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 5.2
SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 28 6.9
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_26819| Best HMM Match : L27 (HMM E-Value=9.5) 28 6.9
SB_58118| Best HMM Match : Somatomedin_B (HMM E-Value=3.7) 27 9.1
SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07) 27 9.1
SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_51999| Best HMM Match : VWA (HMM E-Value=0.045) 27 9.1
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 27 9.1
SB_27693| Best HMM Match : Kringle (HMM E-Value=8.4) 27 9.1
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 27 9.1
>SB_12396| Best HMM Match : Myc-LZ (HMM E-Value=6.2e-10)
Length = 293
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 338 ASSRRNSSSQPTTGSSTLGVTHLRRGSSAH-MDYWRHARSIQAQSRLTADFEQHWRHARS 514
+S RN+SS TT T G TH + +S+H + W H R+ T EQH H
Sbjct: 175 SSHTRNNSSHGTT-HRTHGTTHHTQNNSSHTRNNWSHTRTTHRTQGTTRRTEQHIAHTEQ 233
Query: 515 IQAQ-PRLTASFEQ 553
+ A +L A EQ
Sbjct: 234 LIAHTEQLIAHTEQ 247
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +2
Query: 323 ARNFTASSRRNSSSQPTTGSSTLGVTHLR------RGSSAHMDYWR-HARSIQAQSRLTA 481
ARN T+ +R NSS + T +H R R +S+H R H + Q+ ++
Sbjct: 144 ARNNTSHTRNNSSHTEQLIAHTNNWSHTRNNSSHTRNNSSHGTTHRTHGTTHHTQNN-SS 202
Query: 482 DFEQHWRHARSIQAQPRLTASFEQH 556
+W H R+ T EQH
Sbjct: 203 HTRNNWSHTRTTHRTQGTTRRTEQH 227
>SB_42301| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 600
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 586 VRAEISLQGPVLLEAC---GESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 434
V + +++ +L C G SR+S+N+ +SPV +V G SR+++N+ +SPV
Sbjct: 337 VLSRVTINSDILSSVCSDEGLSRVSINSDTLSPVCSDV-GLSRVTINSDILSPV 389
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = -2
Query: 580 AEISLQGPVLLEAC---GESRLSLNAACVSPVLLEVCGESRLSLNAACVSPV 434
+ +++ +L C G SR+S+N+ +SPV +V G SR+++N+ +SP+
Sbjct: 377 SRVTINSDILSPVCSDEGLSRVSINSDILSPVCSDV-GLSRVTINSDILSPL 427
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 33.9 bits (74), Expect = 0.11
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +2
Query: 182 SASRTPATTIPAFSQIKARH*QSSHSKPASQ----PQQDHRSR-LTALPGPTARNFTASS 346
SAS + +I S K+ Q H K S PQ S+ L ++PG ++ T+SS
Sbjct: 394 SASTSATISISKSSADKSTKKQG-HGKGKSNKRMIPQSSTESQVLISVPGSQPQSSTSSS 452
Query: 347 RRNSSSQPTTGSSTLGVTHLRRGSSA 424
NS S P++ SST T SSA
Sbjct: 453 SSNSQSSPSSSSSTTSATISISKSSA 478
Score = 31.9 bits (69), Expect = 0.42
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 182 SASRTPATTIPAFSQIKARH*QSSHSKPASQ----PQQDHRSR-LTALPGPTARNFTASS 346
S+S T AT + S + H K + PQ S+ L ++PG ++ T+SS
Sbjct: 463 SSSTTSATISISKSSADKSTRKQGHGKGTNNKRMIPQSSTESQVLISVPGSQPQSSTSSS 522
Query: 347 RRNSSSQPTTGSSTLGVTHLRRGSSA 424
N S P++ SST T SSA
Sbjct: 523 SSNLQSSPSSSSSTTSATISISKSSA 548
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 162 QPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATS 335
Q SD S H++ LP +PH +R KHV+D+ T + H+ ++ I ++ + R A S
Sbjct: 120 QDSDFSVVHEK-ELPPNPHEQRVKHVVDT--TQAYHQDNDKEIDEENEQDHNTRQADS 174
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 162 QPSDSSSAHQELRLPQSPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATS 335
Q SD S H++ LP +PH +R KHV+D+ T + H+ ++ I ++ + R A S
Sbjct: 80 QDSDFSVVHEK-ELPPNPHEQRVKHVVDT--TQAYHQDNDKEIDEENEQDHNTRQADS 134
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 257 SKPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAH 427
SK S P R R P P ++ SSR+ S +PT+ SS L L+ S H
Sbjct: 377 SKEKSGPPTPPRHRRNLPPRPVSQMIMPSSRQGRSQEPTSMSSLLAGLSLQSNDSHH 433
>SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 168 SDSSSAHQELRLPQSPHSRR*KHV-IDSRPTASQHRSLN--RTIAADSPRFLVLRHATSL 338
S SSS H ++ + +SP S +H+ I P+ HR + R+ ++D R + + + S
Sbjct: 43 SPSSSHHPQITIVRSPSSYHHRHITIVISPSIYHHRHITILRSPSSDHHRHITIDISPSS 102
Query: 339 PHHA-ATVHRSPRPDHQR 389
HH T+ SP H R
Sbjct: 103 YHHRHMTIVISPSSYHHR 120
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 179 FSASRTPATTIPAFSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNS 358
+S S T ++ +S + QS H + S+ H + T PGPT R+ SSR
Sbjct: 1019 YSQSSTITSSDTVYSPLPNYLGQSKHDEVCSRATPQHANIDTKEPGPTGRSIDPSSRIQE 1078
Query: 359 SSQ 367
S+
Sbjct: 1079 GSR 1081
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 287 HRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQ 466
HR R P R+ A+ + ++ Q +GS+T H R + + ++RH+ ++ +
Sbjct: 885 HRMRRRYGPEHRKRSIKANEQTITARQELSGSATKEWGHFRPSDTMYFRHFRHSETMYFR 944
Query: 467 SRLTAD--FEQHWRHARSI 517
+D + +H+RH+ ++
Sbjct: 945 HFRPSDTMYFRHFRHSETM 963
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 31.9 bits (69), Expect = 0.42
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Frame = +3
Query: 180 SAHQELRLPQ-SPHSRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHATSLPHHAAT 356
S H P+ S H R +H+ P S H L+R + ++ R + H +S HH
Sbjct: 246 SRHHHCHRPRLSNHHRPSRHLHCHCPRLSNHHRLSRHLHSNRLRLSIHHHPSSRHHHC-- 303
Query: 357 VHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLS-----LDSPQTSSSTGDTHAAFK 521
HR +H R ++ A + T H +S SP SSS+ ++F+
Sbjct: 304 -HRLRLSNHHRPSRYLHVTALVFPITI--VHLVIFMSPPSSFQSSPSVSSSSLSPPSSFQ 360
>SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9)
Length = 196
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = -2
Query: 592 SVVRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVVHVCRAA 413
S V ++S++ P+LLE+ E + L + SPVLL+V + + L ++ PV+
Sbjct: 111 SPVLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDVSVKLPVLLESSVELPVLLELSVG 170
Query: 412 TPEMCD 395
+P + D
Sbjct: 171 SPVLLD 176
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -2
Query: 592 SVVRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 431
S V ++S++ PVLLE+ E + L + SPVLL+V + + L + PV+
Sbjct: 141 SPVLLDVSVKLPVLLESSVELPVLLELSVGSPVLLDVSVKLPVLLELSIGLPVL 194
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -2
Query: 586 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 431
V E+S+ PVLL+ + + L ++ PVLLE+ S + L+ + PV+
Sbjct: 103 VLLELSVGSPVLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDVSVKLPVL 154
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -2
Query: 586 VRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRLSLNAACVSPVV 431
V E+S+ PVLL+ + + L ++ PVLLE+ S + L+ + PV+
Sbjct: 133 VLLELSVGSPVLLDVSVKLPVLLESSVELPVLLELSVGSPVLLDVSVKLPVL 184
>SB_17775| Best HMM Match : Coiled (HMM E-Value=2.3)
Length = 877
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 263 PASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWR 442
P+S QD L A GP T SS++ S+ S+ HL S + ++
Sbjct: 11 PSSVSSQDIHDALDAFGGPFRNQDTISSKKASNRDSGVSESSFVSDHLTFTSDSLLNEIG 70
Query: 443 HARSIQAQSRLTAD 484
HA + T+D
Sbjct: 71 HANQMPISHNKTSD 84
>SB_36970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 380 SSTLGVTHLRRGSSAHMDYWRHARSIQ--AQSRLTADFEQHWRHARSIQ 520
+ST GVT + +S H+ WRH S Q +T+ WRH S Q
Sbjct: 307 TSTHGVTSHQYLASRHISTWRHVTSHQHLVSRSVTSYHISTWRHVTSHQ 355
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 366 SPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPQA 545
SP+P +R SH S +A H +G T + S+ SP++ S S + ++
Sbjct: 684 SPKPLSRRSSSHASHIAGSHEQLSGQTSSG---SVGSPKSLSQRSRGREGSSASKSNSKS 740
Query: 546 SSSTGPCKL 572
S S+ P ++
Sbjct: 741 SLSSIPIRV 749
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 273 SLNRTIAADSPRFLVLRHATSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHA 452
SL RT + +PR + R + P +HR R + L S +A+ TT
Sbjct: 321 SLQRTPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTP 380
Query: 453 AFKLSLDSPQTSSSTGDTHAAFKLSLDSPQASSSTGPCKLISAR 584
+++L T+++ G T A + S S ++S + P S+R
Sbjct: 381 PRRVNLLEAFTAAAAG-TPAGSRRSSSSSRSSLPSTPRSRTSSR 423
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 394 GHTSPAWQLCTHGLL 438
GHT P W LC HG L
Sbjct: 458 GHTGPVWALCVHGEL 472
>SB_2284| Best HMM Match : Hormone_5 (HMM E-Value=0.46)
Length = 1266
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 385 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 468
NA+G HT P QLC G L R + SSSV
Sbjct: 858 NAFGTHTCPGEQLCLVGQLGHRARWSSSV 886
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 395 VTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRHARSI 517
+T + S DY R + S+++ SR T+D++QH ++ R +
Sbjct: 457 LTETKSSVSPEKDY-RGSGSVRSSSRRTSDYQQHDQNGRGV 496
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +3
Query: 363 RSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPQ 542
+ P P + +LG + A+ ++W+T D + L+ +S ++ G + ++ S S +
Sbjct: 1317 QGPNPGNFQLGLRLGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAE 1376
Query: 543 ASSST 557
A+SST
Sbjct: 1377 AASST 1381
>SB_41986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 276 LNRTIAADSPRFLVLRHATSLPHHAATVHRS-PRPDHQRLGSHISG 410
+N+T+ + L+LR A+ + AT+ +S P+PD G +G
Sbjct: 241 VNQTLIPQANHLLILREASIVKESLATLKKSVPKPDDPHQGGDSTG 286
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 5.2
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Frame = +3
Query: 237 VIDSRPTASQHRSLNRTIAADSPRFLVLRHATSLPHHAATVHR--SPRPDHQR---LGSH 401
V+ SR +++ RSL + + +V TSLP T H + D Q + S
Sbjct: 17 VLQSRRSSTYSRSLFFVLLLVAVAIVVFFSQTSLPDFMKTSHSKIARSSDDQMDSVVTSQ 76
Query: 402 ISGVAALHTWTTGDTHAAFKLSLDSPQTSSST 497
I A T THA+ K D TS T
Sbjct: 77 IDKRALFKVSTKEQTHASMKTQADDGLTSEET 108
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 253 PQQASIAASTGPSQPTH 303
PQ AS+ S G SQPTH
Sbjct: 548 PQHASVGTSMGQSQPTH 564
>SB_12590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 385 NAWG-HTSPAWQLCTHGLLATRTQHSSSV 468
+A+G HTSP QLC G L R + SSSV
Sbjct: 305 HAFGTHTSPGKQLCLVGQLGYRGRWSSSV 333
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 465 SLDSPQTSSSTGDTHAAFKLSLDSPQASSST 557
S DSP + S + D+ +++ SLDSP + SS+
Sbjct: 18 SPDSPSSYSPSPDSPSSYSPSLDSPSSYSSS 48
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -2
Query: 592 SVVRAEISLQGPVLLEACGESRLSLNAACVSPVLLEVCGESRL 464
S V ++S++ P+LLE+ E + L + SPVLL+ E +L
Sbjct: 191 SPVLLDVSVKLPMLLESSVELPVLLELSVGSPVLLDWLNEHKL 233
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 260 KPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSS 385
K + P+ + TA+PG TA T +S ++ TTG++
Sbjct: 2395 KTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAA 2436
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 260 KPASQPQQDHRSRLTALPGPTARNFTASSRRNSSSQPTTGSS 385
K + P+ + TA+PG TA T +S ++ TTG++
Sbjct: 2938 KTTAAPETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAA 2979
>SB_26819| Best HMM Match : L27 (HMM E-Value=9.5)
Length = 168
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 347 RRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQSRLTADFEQHWRHARSIQAQ 526
RR S S ++ + +LRR S + ++ WR + S+ + WR + S+
Sbjct: 5 RRASESMENLRRASQSMENLRRESESIVNLWRSSESMVNLREASESMVNLWRSSESMVNL 64
Query: 527 PRLTASFEQHW 559
R + S W
Sbjct: 65 WRSSESMVNLW 75
>SB_58118| Best HMM Match : Somatomedin_B (HMM E-Value=3.7)
Length = 306
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -2
Query: 532 SRLSLNA-ACVSPVLLEVCGESRLSLNAACVS 440
+RL+L+A A +P+ L++CG+ LNA VS
Sbjct: 82 ARLTLDAPALKNPIALQLCGDINSPLNALWVS 113
>SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07)
Length = 383
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 420 LHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFKLSLDSPQ 542
L W D+H ++S DS Q + D+H ++S DS Q
Sbjct: 168 LTNWYKDDSHQLVQVSDDSHQLVQVSDDSHQLVQVSDDSHQ 208
>SB_21884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 280 TGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINA 390
TG S P+ + Y TQ+ L T Q + AH NA
Sbjct: 62 TGSSTPSVSGNTDYSTQIKNLTTELQHLGAHMNFHNA 98
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 237 VIDSRPTAS-QHRSLNRTI-AADSPRFLVLRHATSLPHHAATVHRSPRPDHQRLGSHISG 410
V++ T S + R+L+ T+ A PR +R S P H+ D + LG
Sbjct: 416 VVNENLTISCETRALHVTLPAVFLPRDYAIRIVYSFPAELKRSHQRHLGDLRILGERRFS 475
Query: 411 VAALHTWTTGDT 446
+ LH TTG T
Sbjct: 476 IVTLHYITTGST 487
>SB_51999| Best HMM Match : VWA (HMM E-Value=0.045)
Length = 92
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 402 ISGVAALHTWTTGDTHAAFKLSLDSPQTSSSTGDTHAAFK 521
+ G+A+ T + DTH + DSP + G+ H++++
Sbjct: 34 VKGIASSFTVSPADTHLGLLIYADSPNIEAGLGE-HSSYQ 72
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 174 SSSAHQELRLP--QSPHSRR*KHVI-DSRPTASQHRSLNRTIAADSPRFLVLRHATSLPH 344
S SA L+ P QSP ++ HV +S +H + I+A + +LR T + H
Sbjct: 2999 SHSAPVTLKSPWSQSPTAKWGDHVTAESTAVTQEHDTDKSRISAPT----ILRGITGVAH 3054
Query: 345 HAATVHRSPRPDHQRLGSHIS 407
H +T +S R + LGS +S
Sbjct: 3055 HQSTADKSTR-NIAGLGSTLS 3074
>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
Length = 1235
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 280 TGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRIINAWGHTSPAWQLCTHGLLATRTQHS 459
T P P R+++ + + T + H R +A+GH S + + LAT+T+HS
Sbjct: 662 TSPGHP--RSAYGHPSDSQFQETGVKTSPGHPR--SAFGHPSDSQFQESDSKLATKTKHS 717
Query: 460 SSVSTH 477
SV H
Sbjct: 718 MSVHGH 723
>SB_27693| Best HMM Match : Kringle (HMM E-Value=8.4)
Length = 146
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 397 HTSPAWQLCTHGLLATRTQHSSSV 468
HTSP QLC G L R + SSSV
Sbjct: 19 HTSPGKQLCFVGQLGYRGRWSSSV 42
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 246 SRPTASQHR-SLNRTIAADSPRFLVLRHATSLPHHAATVHRSPRPDH 383
S+ TA H +++ A D P L R A PHH + +S PDH
Sbjct: 340 SKRTAPDHTLGVSKRTAPDHPHGLSKRTA---PHHPLGLSKSTAPDH 383
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 262 ASIAASTGPSQPTHRASWSYGTQLHCLITPQQFIAAHDRI--INAWGHTSPAWQLCTHGL 435
A I +ST + TH + T H L TP+ H + H + CTH L
Sbjct: 721 APITSSTPQTTSTHHITTPQTTCTHHLTTPETTSTHHISAPQTTSTHHITTPQTTCTHHL 780
Query: 436 LATRTQHSSSVST 474
T + +ST
Sbjct: 781 TTPETTCTHHIST 793
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,928,448
Number of Sequences: 59808
Number of extensions: 460086
Number of successful extensions: 1732
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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