Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0145
(614 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein. 27 0.64
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 26 1.1
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 25 1.5
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 25 2.6
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 25 2.6
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 3.4
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 24 3.4
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 24 3.4
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 24 3.4
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 24 3.4
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 24 3.4
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 24 3.4
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 24 3.4
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 24 4.5
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 5.9
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 5.9
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 23 7.8
>DQ974164-1|ABJ52804.1| 410|Anopheles gambiae serpin 4C protein.
Length = 410
Score = 26.6 bits (56), Expect = 0.64
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 411 RRRCVTPSVDDPVVGCDELLRRDEAVKLRAVGPGSAVSRL 292
RR TPS DDP+ + L + D V R G+A + L
Sbjct: 333 RRDAFTPSKDDPIFVNEMLHKVDLTVNERGTEGGAATATL 372
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 290 RSRLTALPGPTARNFTASS 346
R+RLT L GP A + TAS+
Sbjct: 764 RNRLTTLDGPLAESLTAST 782
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 25.4 bits (53), Expect = 1.5
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -1
Query: 431 PCVQSCHAGDV*PQALMIRSWAAMNCCGVMRQ*SCV-P*DQEAR*V----GCDGPVEAAM 267
PC SC G A + ++ +NC Q C P +E + GC GP ++
Sbjct: 159 PCHPSCEVGCWGEGAHNCQRFSKLNCSPQCSQGRCFGPKPRECCHLFCAGGCTGPTQSDC 218
Query: 266 LAC 258
LAC
Sbjct: 219 LAC 221
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 24.6 bits (51), Expect = 2.6
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 119 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQNVHVSSYAHAPVAHATVQH 178
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 179 HHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 208
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.6 bits (51), Expect = 2.6
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Frame = +3
Query: 132 TGDLRRDVNTQPSDS---------SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----H 269
TGD++ T+ D S HQ + + H V+ P+A + H
Sbjct: 95 TGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGFNAVVRPEPSAVKIAQPVH 154
Query: 270 RSLNRTIAADSPRFLVLRHATSLPHHAATV--HRSPRPDHQRLGSHISGVAALH 425
+ + + + S + HAT HHAA + + +P H +H + A H
Sbjct: 155 KVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPITHYAAPIAHH 208
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 3.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 271 AASTGPSQPTHR 306
AA+TGP PTHR
Sbjct: 913 AAATGPPPPTHR 924
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 119 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 178
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 179 HHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 119 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 178
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 179 HHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 127 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 186
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 187 HHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 151 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 210
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 211 HHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 240
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 119 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 178
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 179 HHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 119 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQH 178
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 179 HHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 208
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 24.2 bits (50), Expect = 3.4
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = +3
Query: 177 SSAHQELRLPQSPHSRR*KHVIDSRPTASQ-----HRSLNRTIAADSPRFLVLRHATSLP 341
S HQ + + H V+ P+A + H+ + + + S + HAT
Sbjct: 127 SDGHQRIVDYHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVDVSSYAHAPVAHATVQH 186
Query: 342 HHAATV--HRSPRPDHQRLGSHISGVAALH 425
HHAA + + +P H +H + A H
Sbjct: 187 HHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 23.8 bits (49), Expect = 4.5
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2
Query: 227 IKARH*QSSHSKPASQPQQDHRSRLTALPGPTARNFTASSRRNS 358
I A+ Q H QPQQ H+ + + P T F N+
Sbjct: 302 ILAQQQQQQHHHHQHQPQQQHQQQYHSHPHHTPVQFKTELHDNT 345
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.4 bits (48), Expect = 5.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 360 ELLRRDEAVKLRAVGPGSAVSRLRWSC*GCDAGL 259
ELL+R A R GP + S RW DA L
Sbjct: 212 ELLQRPAADSRRQEGPSTRESGTRWRTRHFDAEL 245
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.4 bits (48), Expect = 5.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 446 ARSIQAQSRLTADFEQHWRHARSIQAQPRLTASFEQHWPLQA 571
+R +A R+TA +Q W R+ A FE+ L+A
Sbjct: 994 SRICEAAKRITASLQQAWDDERAALAAHGNEQHFEEVADLEA 1035
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.0 bits (47), Expect = 7.8
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 267 HRSLNRTIAADSPRFLVLRHATSLPHHAATV--HRSPRPDHQRLGSHISGVAALH 425
H+ + + + S + HAT HHAA + + +P H +H + A H
Sbjct: 162 HKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,814
Number of Sequences: 2352
Number of extensions: 14675
Number of successful extensions: 106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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