Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0144
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061623-1|AAL29171.1|  553|Drosophila melanogaster SD09427p pro...    30   3.4  
AE014296-2921|AAF49331.1|  553|Drosophila melanogaster CG6322-PA...    30   3.4  
U46686-1|AAC47040.1|  576|Drosophila melanogaster DEAF-1 protein.      29   4.5  
BT004907-1|AAO49160.1|  573|Drosophila melanogaster LD06278p pro...    29   4.5  
AE014296-3227|ABC66130.1|  573|Drosophila melanogaster CG8567-PB...    29   4.5  
AE014296-3226|AAF49105.1|  576|Drosophila melanogaster CG8567-PA...    29   4.5  
AY051420-1|AAK92844.1|  593|Drosophila melanogaster GH09884p pro...    29   6.0  
AE013599-317|AAM68910.1|  708|Drosophila melanogaster CG30384-PA...    29   6.0  

>AY061623-1|AAL29171.1|  553|Drosophila melanogaster SD09427p
           protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -3

Query: 300 DVLARRRPRLETVSSSN*GESQTAIELILDLGVLS-LCEIDFLPDEPSIGPDAFESRESL 124
           D L R R  LE  S++  G     +E+   L  L+ LC    + D   +   AF    SL
Sbjct: 221 DRLVRAREALEVPSAARAGRM---VEMQKKLQSLAPLCSQ--VGDTRPVSSAAFSEDSSL 275

Query: 123 LLSYSFSDLILGVSVDACELPLSLR 49
           LL+ S+S L    SV  CEL  +LR
Sbjct: 276 LLTSSWSGLCKLWSVPDCELKQTLR 300


>AE014296-2921|AAF49331.1|  553|Drosophila melanogaster CG6322-PA
           protein.
          Length = 553

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -3

Query: 300 DVLARRRPRLETVSSSN*GESQTAIELILDLGVLS-LCEIDFLPDEPSIGPDAFESRESL 124
           D L R R  LE  S++  G     +E+   L  L+ LC    + D   +   AF    SL
Sbjct: 221 DRLVRAREALEVPSAARAGRM---VEMQKKLQSLAPLCSQ--VGDTRPVSSAAFSEDSSL 275

Query: 123 LLSYSFSDLILGVSVDACELPLSLR 49
           LL+ S+S L    SV  CEL  +LR
Sbjct: 276 LLTSSWSGLCKLWSVPDCELKQTLR 300


>U46686-1|AAC47040.1|  576|Drosophila melanogaster DEAF-1 protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 347 CVKCGDVWPASLKVASMC*RGAVLAWKRSLR 255
           CVK  D W    +   +C RG+   WKRS++
Sbjct: 245 CVKYKDKWHTPSEFEHVCGRGSSKDWKRSIK 275


>BT004907-1|AAO49160.1|  573|Drosophila melanogaster LD06278p
           protein.
          Length = 573

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 347 CVKCGDVWPASLKVASMC*RGAVLAWKRSLR 255
           CVK  D W    +   +C RG+   WKRS++
Sbjct: 245 CVKYKDKWHTPSEFEHVCGRGSSKDWKRSIK 275


>AE014296-3227|ABC66130.1|  573|Drosophila melanogaster CG8567-PB,
           isoform B protein.
          Length = 573

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 347 CVKCGDVWPASLKVASMC*RGAVLAWKRSLR 255
           CVK  D W    +   +C RG+   WKRS++
Sbjct: 245 CVKYKDKWHTPSEFEHVCGRGSSKDWKRSIK 275


>AE014296-3226|AAF49105.1|  576|Drosophila melanogaster CG8567-PA,
           isoform A protein.
          Length = 576

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 347 CVKCGDVWPASLKVASMC*RGAVLAWKRSLR 255
           CVK  D W    +   +C RG+   WKRS++
Sbjct: 245 CVKYKDKWHTPSEFEHVCGRGSSKDWKRSIK 275


>AY051420-1|AAK92844.1|  593|Drosophila melanogaster GH09884p
           protein.
          Length = 593

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 241 IPDSNRADFRFGRFILVRDRLSAGR 167
           +PDSN+  F +G+ + V++ L  GR
Sbjct: 554 LPDSNKRKFYYGKLVKVQEELKLGR 578


>AE013599-317|AAM68910.1|  708|Drosophila melanogaster CG30384-PA
           protein.
          Length = 708

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 241 IPDSNRADFRFGRFILVRDRLSAGR 167
           +PDSN+  F +G+ + V++ L  GR
Sbjct: 554 LPDSNKRKFYYGKLVKVQEELKLGR 578


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,345,062
Number of Sequences: 53049
Number of extensions: 618715
Number of successful extensions: 1773
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1773
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)