Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0142
(740 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 1.1
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 2.0
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 2.6
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 23 3.4
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 23 3.4
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 23 3.4
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 22 6.0
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 6.0
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 6.0
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 6.0
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 6.0
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 454 WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 570
W+S ++ W T + +R +S RPT ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 493 PVSTSHWSRTRQSSLPRRPT 552
P +T+HW +S RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 351 YGGRCHRWLHC 319
Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 702 RCPRSHPWVRRHHGTAY 652
RCP ++PWV G +
Sbjct: 517 RCPNNYPWVNDPTGDGF 533
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 84 QRACGFCPKPNLRFPFQWCSDHGHSCW 4
Q C + PN C+D SCW
Sbjct: 15 QLECNWSSGPNATLQSSACTDDLSSCW 41
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = +1
Query: 487 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 666
L P TS R + + PR + + N ++ +TW+++ C
Sbjct: 258 LHPAETSMNDANRNDCAKPLTQIRNIRGPRKRLRFAYVTRTGANIKKLIVNTWISLFCVK 317
Query: 667 VTS 675
VT+
Sbjct: 318 VTN 320
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 22.6 bits (46), Expect = 3.4
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -3
Query: 699 CPRSHPWVRRHHGTAYS 649
CP ++PW+ G +S
Sbjct: 516 CPNNYPWILEPTGDGFS 532
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 9 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 98
+YAR G IVD+ LD R L CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -3
Query: 699 CPRSHPWVRRHHGTAYS 649
CP ++PW+ G +S
Sbjct: 509 CPNNYPWILDPTGDGFS 525
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 324 EAIYDICRRNLDIERPTYTNLNRLIGQIV 410
E I DIC R+ D ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 643 WLAVCCTVVTSYPRM 687
W VC VV YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 608 LVGGLEACVCDLG 570
L+GG +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 663 GTAYSKPCTCHDGGRISPSG 604
G A++ P HD G SP G
Sbjct: 50 GNAHTGPTGTHDAGFPSPRG 69
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,680
Number of Sequences: 336
Number of extensions: 4180
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -