Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0142
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 421 e-118
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 421 e-118
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 421 e-118
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 421 e-118
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 421 e-118
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 421 e-118
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 400 e-112
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 219 2e-57
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 218 4e-57
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 217 8e-57
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 215 3e-56
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 215 3e-56
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 215 3e-56
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 215 3e-56
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 215 3e-56
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 213 1e-55
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 130 1e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 128 5e-30
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.037
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.80
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 30 1.4
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.9
At1g68080.1 68414.m07777 expressed protein 30 1.9
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.4
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 29 3.2
At2g15020.1 68415.m01710 expressed protein and genefinder 28 5.7
At1g62870.1 68414.m07099 expressed protein 28 5.7
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 5.7
At4g30150.1 68417.m04287 expressed protein 27 9.9
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 27 9.9
At3g11690.1 68416.m01433 expressed protein 27 9.9
At3g08670.1 68416.m01007 expressed protein 27 9.9
At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family... 27 9.9
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 421 bits (1037), Expect = e-118
Identities = 192/246 (78%), Positives = 216/246 (87%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDI
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 220 ERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAA 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
T+QFVD
Sbjct: 340 TVQFVD 345
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 421 bits (1037), Expect = e-118
Identities = 192/246 (78%), Positives = 216/246 (87%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDI
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 220 ERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAA 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
T+QFVD
Sbjct: 340 TVQFVD 345
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 421 bits (1037), Expect = e-118
Identities = 191/246 (77%), Positives = 219/246 (89%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAE
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
TIQFVD
Sbjct: 340 TIQFVD 345
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 421 bits (1037), Expect = e-118
Identities = 191/246 (77%), Positives = 219/246 (89%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAE
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
TIQFVD
Sbjct: 340 TIQFVD 345
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 421 bits (1036), Expect = e-118
Identities = 191/246 (77%), Positives = 218/246 (88%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAE
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
TIQFVD
Sbjct: 340 TIQFVD 345
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 421 bits (1036), Expect = e-118
Identities = 191/246 (77%), Positives = 218/246 (88%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
DYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L I
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAE
Sbjct: 220 ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNA + TIKTKR
Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339
Query: 723 TIQFVD 740
TIQFVD
Sbjct: 340 TIQFVD 345
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 400 bits (984), Expect = e-112
Identities = 180/246 (73%), Positives = 209/246 (84%)
Frame = +3
Query: 3 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSV 182
ANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL+ERLSV
Sbjct: 100 ANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 159
Query: 183 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
D+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDI
Sbjct: 160 DFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDI 219
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAE 542
ERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+
Sbjct: 220 ERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSA 279
Query: 543 KAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKR 722
KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN +A IK KR
Sbjct: 280 KAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKR 339
Query: 723 TIQFVD 740
TIQFVD
Sbjct: 340 TIQFVD 345
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 219 bits (534), Expect = 2e-57
Identities = 99/245 (40%), Positives = 152/245 (62%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 100 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 219
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 220 TPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 279
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I I+ K +
Sbjct: 280 QQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNS 339
Query: 726 IQFVD 740
FV+
Sbjct: 340 SYFVE 344
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 218 bits (532), Expect = 4e-57
Identities = 98/245 (40%), Positives = 152/245 (62%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 100 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 159
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 160 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 219
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 220 TPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 279
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ I ++ K +
Sbjct: 280 QQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNS 339
Query: 726 IQFVD 740
FV+
Sbjct: 340 SYFVE 344
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 217 bits (529), Expect = 8e-57
Identities = 97/245 (39%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 215 bits (525), Expect = 3e-56
Identities = 96/245 (39%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 215 bits (525), Expect = 3e-56
Identities = 96/245 (39%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 215 bits (525), Expect = 3e-56
Identities = 96/245 (39%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 215 bits (524), Expect = 3e-56
Identities = 96/245 (39%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 215 bits (524), Expect = 3e-56
Identities = 95/245 (38%), Positives = 151/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLS 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 279 QQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 213 bits (520), Expect = 1e-55
Identities = 97/245 (39%), Positives = 150/245 (61%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A+GHYT G E++D VLD +RK A+ LQGF + H LL+ ++ +
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 186 YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 365
Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 YPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA 218
Query: 366 RPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 545
PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Query: 546 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAGIATIKTKRT 725
+ LSV E+T ++ N M DPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 279 QQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNS 338
Query: 726 IQFVD 740
FV+
Sbjct: 339 SYFVE 343
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 130 bits (313), Expect = 1e-30
Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 7/252 (2%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 102 NNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR 160
Query: 186 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISA 539
PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ +
Sbjct: 221 TNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER 280
Query: 540 EKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAGIA 704
+ + +V ++ + N MV R+ KY++ + +G+V P V+ +
Sbjct: 281 QANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQ 340
Query: 705 TIKTKRTIQFVD 740
I+ ++ + F+D
Sbjct: 341 RIRERKLVNFID 352
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 128 bits (308), Expect = 5e-30
Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 7/252 (2%)
Frame = +3
Query: 6 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 185
NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 102 NNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR 160
Query: 186 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 362
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHL 220
Query: 363 ERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISA 539
PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ +
Sbjct: 221 TNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVER 280
Query: 540 EKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAGIA 704
+ + +V ++ + N MV R+ KY++ + +G+V P V+ +
Sbjct: 281 QANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQ 340
Query: 705 TIKTKRTIQFVD 740
I+ ++ + F++
Sbjct: 341 RIRERKLVNFIE 352
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 413 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 547
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 447 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 587
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 695 RVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 591
RV I Y D + + H H L TG+ HH+ G++
Sbjct: 60 RVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 362 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 228
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 737 DELDSTLGFDGSDARVHILGYDVTTVQ 657
D + +GFD AR+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 143 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 45
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Frame = -1
Query: 515 DQWEVDTG-VRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQ-VGVGWALNVEITAA 342
D+ E+D + H +L ++ + E+Q+ G+ E + G G +L +
Sbjct: 319 DEIEIDINDLSHDALFQLRDLFDEFLRENQKKDSNGEPCVLELLHGSGPGNSLTQHCDGS 378
Query: 341 DVIDGFI--------VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 213
++ D + + H STVR K VGG +++ G +L G DG
Sbjct: 379 ELEDEDVDIGNYEHPISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 441 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 617
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 472 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 603
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 180 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 341
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 342 CRRNLDIERPTYTNL 386
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
>At4g30150.1 68417.m04287 expressed protein
Length = 2009
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 237 STAVVEPYNSILTTHTTLEHSDCAFMVD-NEAIYDIC-RRNL--DIERPTYTNLNRLIGQ 404
S V+EP++ L TH T ++ C F+ E D+ NL D + +L RLI
Sbjct: 295 SCLVLEPFSRFLMTHPTTKNGFCDFLDKLFEPFMDVLGLLNLIEDKNKDLEISLLRLIED 354
Query: 405 IVS-SITASLRFDGALNV 455
I+S ++ S DG L +
Sbjct: 355 ILSLALFHSAHIDGFLGL 372
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 27.5 bits (58), Expect = 9.9
Identities = 28/138 (20%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Frame = -1
Query: 470 ELGEVHIQSAVESQRSSDRGDNLSDETIQVGVGWALNVEITAADVIDGFIVDHESTVRVL 291
E GEV ++S ++ + + D + V +++ +I A+ G +V + V+
Sbjct: 440 EGGEVELESDKATEEGGGKLVSEGDSMVDSSVVDSVDADINVAE--PGVVVVGAAKEAVI 497
Query: 290 KGCVGGE--DRVVGLDDGSGNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVE 117
K + D+ + + +L DG + + + + EP+ G E +
Sbjct: 498 KEDDKDDEVDKTISNIEEPDDLTAAYDGNFELAVKEISEAAKVEP--DEPKVGVEVEELP 555
Query: 116 DQESLQTGTLVSELADSV 63
ESL+ G++ +E DS+
Sbjct: 556 VSESLKVGSVDAE-EDSI 572
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 490 TPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 669
TP S+ S RQ L R +++S PSPR+ S+P T A+ W C +V
Sbjct: 21 TPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLV 77
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 457 TSPSSRLTWCLTPVSTSHWSRTRQSSLPR--RPTMNSFPSPRSQTHASSPPTRW*NATPV 630
+SPSSR + P + + S +SS P RP +S +++ SS P +TP
Sbjct: 194 SSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRP-----STPT 248
Query: 631 MASTWLAVCCTVVTSYPRM*TRASLPSKPSVLSNS 735
A ++ S P +R S P++ S S S
Sbjct: 249 SRPQLSASSPNIIASRPN--SRPSTPTRRSPSSTS 281
>At1g21090.1 68414.m02638 hydroxyproline-rich glycoprotein family
protein
Length = 242
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 457 TSPSSR-LTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVM 633
T P+S TW + + ++S T +SLP+ +N + + A+SPP++ PV
Sbjct: 82 TKPNSTSFTWYPSRTGSYYFSFTNNTSLPKTCQLNQKLTVQVILAAASPPSQPPATAPVP 141
Query: 634 AS 639
S
Sbjct: 142 VS 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,393,532
Number of Sequences: 28952
Number of extensions: 391496
Number of successful extensions: 1309
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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