Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0139
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 41 2e-04
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 37 0.003
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 34 0.017
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 34 0.023
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 34 0.023
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 33 0.040
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.053
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 32 0.092
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 31 0.16
SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.16
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.16
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.21
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 0.28
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.49
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 29 0.49
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 29 0.49
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 29 0.65
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 29 0.86
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 28 1.1
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 28 1.5
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 28 1.5
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 27 2.0
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 27 2.0
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 27 2.0
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 27 2.0
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 2.0
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 27 2.6
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 27 3.5
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 27 3.5
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 26 4.6
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 4.6
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 26 4.6
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 4.6
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 26 6.1
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 26 6.1
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 26 6.1
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 6.1
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 26 6.1
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 25 8.0
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 8.0
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 8.0
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 8.0
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.0
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 25 8.0
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 41.1 bits (92), Expect = 2e-04
Identities = 30/122 (24%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Frame = +1
Query: 358 DAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQK-LEQRV 534
+A RLA++ + A+ QE+ RK E+Q + + + E K +K QK E+++
Sbjct: 616 EAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKL 675
Query: 535 RELENELDGE-----QRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 699
++ + E D E QR + +K + + ER+ +E + EE+R+ E ++ ++ +++
Sbjct: 676 KKQQQEADREKMAREQRLREEEEKRILE-ERKRREKLDKEEEERRRRELLEKESEEKERR 734
Query: 700 IK 705
++
Sbjct: 735 LR 736
Score = 29.5 bits (63), Expect = 0.49
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +1
Query: 376 DELRAEQDHAQ--TQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELEN 549
DE ++D T E+ + + + RL E K A Q+ + + E+E
Sbjct: 519 DEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEIEE 578
Query: 550 ELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 699
E +Q R + K + K+L EE+R+ E + L ++ QK
Sbjct: 579 ENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRRE-AERLAEQAAQK 627
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 36.7 bits (81), Expect = 0.003
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 502 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 681
K+A ++ EQR+RE E + E++R A+ ++ RK E R+K + E++RK E M+
Sbjct: 257 KRAREEEEQRIREEEARIAEEEKRLAEVEE-ARKEEARLK----KKEKERKKKEEMKAQG 311
Query: 682 DKLQQKIK 705
L +K K
Sbjct: 312 KYLSKKQK 319
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 34.3 bits (75), Expect = 0.017
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Frame = +1
Query: 388 AEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRE-------LE 546
A ++ +EK+ + +KELQ +L E ++ + K + +L+ +R+ LE
Sbjct: 34 AAKEEKPAEEKVAETENVDVKELQSKLSELKSK-YEAKDKEVAELKGSIRQSLADYRNLE 92
Query: 547 NEL--DGEQRRHADAQ---KNLRKSERRI-KELTFQAEEDRKNHERMQDLVD 684
N + D EQ R Q K+L S + + L+ EE R N E +DLVD
Sbjct: 93 NRMKRDMEQTRAFAVQKLTKDLLDSVDNLERALSIVPEEKRNNRESNKDLVD 144
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 33.9 bits (74), Expect = 0.023
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 370 LADELRAEQDHAQTQE--KLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL 543
L D++ + + + E L+ A Q + ++RLD A + K+ +E+R L
Sbjct: 102 LKDKIEDQNNSLEKTEFIALQNANSLQDTQAKLRLDPLLAIKQQEQKQLQTLMEKRKYSL 161
Query: 544 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHER 666
+++ ++RRH D + R + Q D++ H R
Sbjct: 162 DSDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDKREHSR 202
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 33.9 bits (74), Expect = 0.023
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +1
Query: 373 ADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLE-QRVRELEN 549
A E R Q A E+L++ E+Q +E + +L E E A K K ++KLE +R+R
Sbjct: 85 AQEERIRQKEA---ERLKREKERQQREQEKKLREQEKIAAK-KMKELEKLEKERIR---- 136
Query: 550 ELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQ 672
L +QRR + + LR+ E E +E N ER Q
Sbjct: 137 -LQEQQRRKEERDQKLREKE----EAQRLRQEQILNKERQQ 172
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 33.1 bits (72), Expect = 0.040
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +1
Query: 517 KLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNH----ERMQDLVD 684
K +++ELEN L E++R+ + +K +R+ ++ +KEL Q +K QD++D
Sbjct: 219 KDSNQIQELENLLRKEKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILD 278
Query: 685 KLQQK 699
K+ +
Sbjct: 279 KMNDE 283
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.053
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Frame = +1
Query: 370 LADELRAEQDHAQTQEKLRKA-----LEQQIKELQVRLD-EAEANALKGGKKAIQKLEQR 531
L+ EL A ++H+ TQ L A L Q++ + + E E L + + + E+
Sbjct: 1547 LSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEKT 1606
Query: 532 VRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEED--RKNHERMQDLV-DKLQQKI 702
ELEN+L+ + +RIKEL QA+++ H+ + D++ ++++K+
Sbjct: 1607 KEELENQLN--------------EKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKL 1652
Query: 703 K 705
K
Sbjct: 1653 K 1653
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 31.9 bits (69), Expect = 0.092
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 541 LENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQ 693
L LDG Q + AQ +R+ ++ELT + +E H +M+ VD LQ
Sbjct: 364 LSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEG-VDFLQ 413
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 31.1 bits (67), Expect = 0.16
Identities = 22/100 (22%), Positives = 47/100 (47%)
Frame = +1
Query: 400 HAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHA 579
H + L + ++ E V D AE + +G +K+ + E++ + L+G+ + A
Sbjct: 27 HDDLDDVLSSSSDEDNNE-NVGQDYAEESGGEGNEKSEDEFEEKFKN-PYRLEGKFKDEA 84
Query: 580 DAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 699
D K + +E + + F+ EE+ ++L +L Q+
Sbjct: 85 DRAKIMAMTEIERESILFEREEEISKLMERRELAIRLHQQ 124
>SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +1
Query: 388 AEQDHAQTQEKLRKAL-EQQIKELQVRLDEAEA--NALKGGKKAIQKLEQRVRELENELD 558
+E D R AL E + +++ +R D+ + + L ++ ++ LEQ V E N+L+
Sbjct: 122 SEADFENCSYLFRTALSELRSEKINMRKDQISSLRSGLFSNQREVESLEQLVHEQLNKLN 181
Query: 559 GEQRRHADAQKNLRKSE 609
E + + +KN K+E
Sbjct: 182 TESKMEFENRKNDTKNE 198
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +1
Query: 415 EKLRKALEQQIKELQVRLDEAEANALKGGKKAIQ----KLEQRVRELENELDGEQRRHAD 582
E+++ E + ++ +R EA+ + KK IQ +LE+R +L N+L+ Q
Sbjct: 1988 ERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQASETQ 2047
Query: 583 AQKNLRKSERRIKELTFQAEEDRKNHERMQDLVD 684
+ LR++E ++E + + + ++ + L++
Sbjct: 2048 WKFALRRTEHALQEERERVKSLETDFDKYRSLLE 2081
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.21
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +1
Query: 364 ARLAD-ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRE 540
+ +AD LR +Q+ + +RK+L+ + + + ++E + A+ + I +L +
Sbjct: 482 SEIADLSLRLQQEELSLDD-IRKSLQGKTEGISNAIEEKQ-KAMAPALEKINQLTSEKQI 539
Query: 541 LENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR 651
L+ ELD + D ++ S+ + +L AEE+R
Sbjct: 540 LQVELDMLLNKENDLINDVESSQSSLDKLRNDAEENR 576
Score = 28.7 bits (61), Expect = 0.86
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +1
Query: 442 QIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIK 621
Q+++ + R +E +L + ++ +R+ E E+ Q + + + ERRI
Sbjct: 819 QLEDTRYRQHLSELESLN---QRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRIL 875
Query: 622 ELTFQAEEDRKNHERMQDLVDKLQQKIK 705
+L + R N+ER ++L +K+ K
Sbjct: 876 QLKSDLKSIRNNNERKRNLQNKISNMDK 903
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 30.3 bits (65), Expect = 0.28
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +1
Query: 376 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 555
DE+ +A+ +++ K L++ +E QV++D+A + K+ +K+E RV E +
Sbjct: 175 DEIFESLRYAKALDQI-KGLKRD-QETQVKVDQATLTHYRSDKERAEKIELRVHESLKRI 232
Query: 556 DGEQRRHADAQKNLRKSERRIKELTFQAEE 645
+ + + + + ++ R EL EE
Sbjct: 233 SCIRSKVEELDQEITETARLQDELFKSTEE 262
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 0.49
Identities = 22/108 (20%), Positives = 44/108 (40%)
Frame = +1
Query: 379 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 558
E + + H Q E+L K Q K+ + ++++ E+ + L+
Sbjct: 1412 EAKVAECH-QLNEQLNKPSATPTATTQSEPSTVSLEEFNSTKEELSSTQRKLSEIMDILN 1470
Query: 559 GEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKI 702
+ ++N KSE K+ EE+ + + MQ V +L+ +I
Sbjct: 1471 TTKEELEKVRQNSNKSEGTSKDTEIPNEEEMERKKVMQQEVLRLRSRI 1518
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 29.5 bits (63), Expect = 0.49
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +1
Query: 439 QQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRI 618
++++E DE ++LK ++ +QKL + LE + R +++ L + +RR+
Sbjct: 19 RKLEEFGQNPDEEIESSLKDVRQELQKLNEEQSRLEKNAQIPEYRVRESEAFLIRMQRRL 78
Query: 619 KELTFQAEEDRK 654
+ + E+ R+
Sbjct: 79 ESAEEEFEKQRR 90
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 29.5 bits (63), Expect = 0.49
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 442 QIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRR-HADAQKNLRKSERRI 618
QI++L+ +A + + +KL QR REL + + EQRR A K + S R+
Sbjct: 24 QIEQLRKAQIREKAREITEERNRQRKL-QRERELRQKYEEEQRRQQAMEAKRIAASTRQT 82
Query: 619 KELTFQAEEDRKNHERMQDLVDKLQQK 699
E + E+ K +++ D+L+ K
Sbjct: 83 SERPPLSAEEAKRIREVKE-KDRLESK 108
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 29.1 bits (62), Expect = 0.65
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +1
Query: 415 EKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL------ENELDGEQRRH 576
E+ K +E++ ++ + RL AN KKA+++L Q+ REL E EL ++ +
Sbjct: 354 EEFHKLIEERQRQHEERLKRINAN-----KKALEELNQKKRELAQQQLKEQELLMQKIKE 408
Query: 577 ADAQKNLRKSERRIKELTFQAEED 648
D N R + +AE D
Sbjct: 409 TDRSGNKRLMLLETQHSLLKAEAD 432
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 28.7 bits (61), Expect = 0.86
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +1
Query: 376 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 555
DEL + Q+ + LEQQI +L L E N ++ K ++K +++ +L ++L
Sbjct: 528 DELHEAINSKNVQQSRSEELEQQISKLTDNLQEYR-NTVRELKLDLEKSKKKNEDL-SKL 585
Query: 556 DGEQ-RRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIK 705
+ E+ A+ +K L ++ +E F+ ++ N + L++ ++ K
Sbjct: 586 EVEKVEEIANLKKELTHLAKQ-QEFGFKYVQEFSNEDLQGKLIEANEKNYK 635
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +1
Query: 403 AQTQEKLRKALEQQIKELQ----VRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQ 567
A+ +EKL K EQ+++EL+ + + E+ + K A+ +LE +L+ LD ++
Sbjct: 104 AELEEKLAKRREQELQELEKQEKIEAEILESRLQEQRKVALDELELDRNDLKKVLDNKK 162
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 1.1
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 514 QKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQ 693
Q+LEQ EL ++R A+ Q+ + ERR KEL E+++K ER++ L+++ +
Sbjct: 106 QRLEQE--RFNRELLEKKRIEAERQRLKDEEERRKKEL---MEKEKKEKERIR-LIEEQK 159
Query: 694 QK 699
K
Sbjct: 160 HK 161
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/107 (21%), Positives = 43/107 (40%)
Frame = +1
Query: 379 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 558
E Q HA ++KL K E+ + Q L ++ K + L + +
Sbjct: 69 EADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKEN 128
Query: 559 GEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 699
Q+ + + ERR E+ +E+ E+M DL ++ ++K
Sbjct: 129 TPQQPKKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKK 175
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +1
Query: 376 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKK---AIQKLEQRVRELE 546
+E E++ T + + L Q + L+ +E N +K ++ AIQ LE+R R ++
Sbjct: 251 EESEPEKELKATFNQQNQDLYNQTEALKSTNEEL-INQIKSAEELDSAIQVLEERYRTMQ 309
Query: 547 NELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIK 705
+ Q + + + +K+L EE + +++ D L+ +++
Sbjct: 310 RDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVE 362
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/67 (19%), Positives = 35/67 (52%)
Frame = +1
Query: 502 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 681
++ I ++ + +E + + +RH + N E+R+KEL Q ++++ + + ++
Sbjct: 697 EEMIIRMAEEEKEYDRFVSELNQRHETEEWNQEAFEKRLKELKNQKRSEKRDADEVTQVM 756
Query: 682 DKLQQKI 702
K Q++
Sbjct: 757 IKECQEL 763
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/102 (17%), Positives = 51/102 (50%)
Frame = +1
Query: 376 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 555
++L ++ + + K L++++KEL+ ++ ++ ++ + + EQ+ +
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELE-NANKTLSDLVRRIQIQRDEAEQKAEIYNRDA 118
Query: 556 DGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 681
++ H D +K L KS+ + +L ++ +E +QD++
Sbjct: 119 LNTKQEHLDIKKRLEKSDETVCKL-------KEENENLQDML 153
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 502 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR---KNHERMQ 672
K+ I KLE+ N L+ +QR+ + + + +KEL Q + R + H+R
Sbjct: 41 KQKILKLEEIAASDSNSLNDDQRKALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQF 100
Query: 673 DLVDKLQQK 699
+ + ++K
Sbjct: 101 EATENAKRK 109
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 502 KKAIQKLEQRVRELENE--LDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQD 675
+K K Q + + N+ ++ EQ+ DA+ + K++TF+AEE RK E+ +
Sbjct: 84 EKTTNKPAQLWKAVGNDEVVESEQQDSHDAESIPQFGLLTGKQVTFKAEERRKREEKSSN 143
Query: 676 LVDKLQQK 699
L ++ +K
Sbjct: 144 LDEEELRK 151
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +1
Query: 358 DAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEAN--ALKGGKKAIQKLEQR 531
D + L A ++ T+ + E+ ++ Q RL E + K + +Q+
Sbjct: 853 DLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQNENLQRESAS 912
Query: 532 VRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEED 648
++++ NEL+ E + L + +KE E+D
Sbjct: 913 LKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKD 951
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 502 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 681
K+ + ++++R +EL+ E + ++ HA+ + R QA+ DR ERM+ L
Sbjct: 42 KRKLDEIKEREKELKREKEEQRAAHAEKIRTRR-----------QAKADR---ERMELLQ 87
Query: 682 DKLQQKI 702
KL QK+
Sbjct: 88 AKLHQKV 94
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +1
Query: 412 QEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQR 570
++K K L++ K+ + + EAE A + KK + + + ++ +LD E +
Sbjct: 803 EKKSSKKLDKNTKDYETKRWEAEVRAKQSAKKPAKLSKDQQALVDAQLDAEAK 855
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 3.5
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 436 EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDG-EQRRHADAQKNLRKSER 612
++QI++L+ +E E G + +KLE+ V L ELD + +A+K ++
Sbjct: 120 QKQIEDLKKEKEEME-----GSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKE 174
Query: 613 RIKELTFQAEEDRKNHERMQ-DLVDKLQQKIK 705
++ + ++ K+ E+ + KL KI+
Sbjct: 175 ECEKSWLEQQKLYKDMEQENASTIQKLTSKIR 206
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 97 SERRANALQNELEESRTLLEQADRARRQAE---QELSDAHE 210
SE+R N L+ +L ++ TLL + + +SD+HE
Sbjct: 136 SEKRVNQLKKQLVDAETLLSSTQHQLTELKDVMHSMSDSHE 176
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 4.6
Identities = 22/105 (20%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +1
Query: 379 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 558
+LR + D+ Q+ + L ++++ L+ +E E N K +++ +++R+ + + +
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLE---EELETN-----DKLLRETTEKMRQTDVKAE 117
Query: 559 GEQRRHADAQKNLRKSERRIKELT-----FQAEEDRKNHERMQDL 678
+RR ++ E++++E+T +AE D + H+ ++DL
Sbjct: 118 HFERRVQSLERERDDMEQKLEEMTDKYTKVKAELD-EVHQALEDL 161
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 26.2 bits (55), Expect = 4.6
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 367 RLADELRAEQDHAQT-QEKLRKALEQQIKELQ-VRLDEAEANALKGGKKAIQKLEQRVRE 540
R D++ Q+ ++ Q L+K L+ ++ LQ ++ D + ++ LEQ++
Sbjct: 293 RETDDVNIAQNKSKLIQRDLQKVLDYKLGILQSLKNDGPNGPSASAIDNDLKMLEQQLNV 352
Query: 541 LENELDGEQRRHADAQKNLR 600
L L+G + + A ++ LR
Sbjct: 353 LGRHLEGRKSQVAKLEERLR 372
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 4.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 374 RTSSAPSRITLRPRRNSARLSSNKSRNSK 460
R S+PS++++RP+ S RL + ++ ++
Sbjct: 746 RMVSSPSKVSIRPKMKSVRLLAREASEAR 774
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 14 TRHKSRICRPLSRRSSAPVTMPANSSASRSVA 109
T H RIC+ +SR+++AP P SS + + A
Sbjct: 146 TPHVIRICKSVSRQNAAPA--PTASSFAHTTA 175
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 6.1
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +1
Query: 367 RLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELE 546
RL +EL Q+ Q Q + LE+ EL + KG K K E ++ L+
Sbjct: 88 RLKNELELYQNECQLQLNKVRTLERDQAELITQN--------KGLKDVNAKNELTLKALK 139
Query: 547 NELDGEQRRHADAQKNLRKSERRIK 621
N+L R+H + L+ + +K
Sbjct: 140 NQLSVSLRQHEQQMETLKGNYGLVK 164
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 418 KLRKALEQQIKELQVRLDEAEANALKGGK---KAIQKLEQRVRELENELDGEQRRHADAQ 588
K+R+ L Q+ E +RL++ + GK KA+++ + +E E ++ + Q
Sbjct: 148 KIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQERQ 207
Query: 589 KNLRKSE 609
N+ ++E
Sbjct: 208 ANVIRAE 214
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 511 IQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKL 690
+Q +E+R+RELE E ++ A + + +ERR E + E H+ + ++D L
Sbjct: 193 LQYIEERLRELEEE------KNDLAVYHKKDNERRCLEYAIYSRE----HDEINSVLDAL 242
Query: 691 QQ 696
+Q
Sbjct: 243 EQ 244
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 421 LRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQ 567
+ K L + +KEL+ + A+ G K +Q +++ + E E L+G +
Sbjct: 1152 MAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKEQNLEGTE 1200
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 565 QRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 699
+R A K +K + IKEL A + +R+Q L+ +LQQ+
Sbjct: 18 ERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQE 62
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/44 (25%), Positives = 28/44 (63%)
Frame = +1
Query: 544 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQD 675
+N+L+ + +KNLRK + IK+ +A+++ +++++ +D
Sbjct: 282 QNQLENHENSKKH-KKNLRKMNQEIKKHAKEAQKNAESNKQPED 324
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 8.0
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Frame = +1
Query: 397 DHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRH 576
D A + ++K EQ +KELQ++ + + + ++ E R +N+ DG
Sbjct: 120 DEADVEILVQKYREQLLKELQLQKSTEKGKNFESILQPQKRKETRGFHSKNDDDGRLEER 179
Query: 577 ADAQKNL--------RKSERR---IKELTFQAEEDRKNHERMQDLVDKLQQK 699
D + ++ R SER+ K E+R+ H D+L+++
Sbjct: 180 DDLRSSVDDDYYDYPRYSERKSLNSKRHVDNYNENRRRHYDSYSSYDELERR 231
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 8.0
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 472 EAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR 651
+AE N K K+ + L Q+ ++ ++EL ++ + K +RK R + +T +E+
Sbjct: 86 DAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKKPAR-RIVTIANDEEE 144
Query: 652 KNHERMQD 675
++ + M +
Sbjct: 145 EDDQTMDE 152
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 8.0
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +1
Query: 385 RAEQDHAQTQEKLRKAL-----EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELEN 549
RA ++ + QE+ + + EQQ +L++ EAE + +K ++ + E
Sbjct: 132 RAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYE 191
Query: 550 ELDGEQRRHADAQKNLRKSERRIKELTFQAEE 645
EL E +H D Q + +E R + TF+ E
Sbjct: 192 ELRNECLKH-DPQLD---AEIRTLQDTFEEVE 219
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 391 EQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELE---NELDG 561
E +HAQ + ++ ++L AE N L+ + A ++ + E NEL+
Sbjct: 481 EYEHAQQCMEAILIVDNSNTNALIKL--AEINELQDNRDAALEIVTNIFEQRRNINELER 538
Query: 562 EQRRHADAQKNL 597
EQ ++ D +KN+
Sbjct: 539 EQSQNEDHEKNV 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.126 0.317
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,726,013
Number of Sequences: 5004
Number of extensions: 22411
Number of successful extensions: 173
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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