Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0134
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.48 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.48 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 631 TSYHLTYATYGFIYKTRVKSFVFRIANRLFS 723
           T++HL Y  +GF YK  ++   + I N + S
Sbjct: 139 TTFHLIYEAHGFSYKCGIQ---YHICNTVIS 166


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 631 TSYHLTYATYGFIYKTRVKSFVFRIANRLFS 723
           T++HL Y  +GF YK  ++   + I N + S
Sbjct: 135 TTFHLIYEAHGFSYKCGIQ---YHICNTVIS 162


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 528 WRRVLYPVYK 557
           W R+ YP+YK
Sbjct: 69  WGRLYYPIYK 78


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 528 WRRVLYPVYK 557
           W R+ YP+YK
Sbjct: 69  WGRLYYPIYK 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,866
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)