Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0134
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    75   2e-15
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   2.4  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    24   5.6  

>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 74.9 bits (176), Expect = 2e-15
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = +2

Query: 176 NTKHLRKGDPLP--PFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLT 349
           N KHL KG   P  P +GKLR+Y+MR+CPYAQR  L L+AK+I Y  + I+L +KPEW  
Sbjct: 3   NGKHLAKGSSPPSLPDDGKLRLYSMRFCPYAQRVHLMLDAKKIPYHAIYINLSEKPEWYL 62

Query: 350 TKSAFG 367
            K+  G
Sbjct: 63  EKNPLG 68


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 708 RNPKHETFDSCFIDKSICCISQMIRCR 628
           R PK+E +  C       CIS+ ++C+
Sbjct: 25  RCPKNEVYSCCAPCPQKACISEAVKCQ 51


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLI 328
           D LP     L  Y    C +  R  +ALN K+I Y++  I LI
Sbjct: 5   DILPESQPILYSYWRSSCSWRVR--IALNLKEIPYDIKPISLI 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,838
Number of Sequences: 2352
Number of extensions: 12993
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)