Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0134
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 74 9e-14
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 74 9e-14
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 60 1e-09
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 44 1e-04
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 35 0.069
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 4.5
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 4.5
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 4.5
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 4.5
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 4.5
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 28 7.9
Z70310-4|CAA94368.1| 347|Caenorhabditis elegans Hypothetical pr... 28 7.9
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = +2
Query: 176 NTKHLRKGDPLP--PFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLT 349
NTK ++ GDP P P +G +R+YNMRYCP+AQR ++ + K+I EV+NI L KP+W
Sbjct: 8 NTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWFF 67
Query: 350 TK 355
TK
Sbjct: 68 TK 69
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = +2
Query: 176 NTKHLRKGDPLP--PFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLT 349
NTK ++ GDP P P +G +R+YNMRYCP+AQR ++ + K+I EV+NI L KP+W
Sbjct: 291 NTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKPDWFF 350
Query: 350 TK 355
TK
Sbjct: 351 TK 352
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 254 PYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTK 355
P AQR ++ + K I +V+N+ L +KP+W +K
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSK 61
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +2
Query: 179 TKHLRKGDPLPPFN-GKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTK 355
+K +RKGD PP + G RVYNMR+CP+A+R +L + AK I+ EVVN+++ DK EW TK
Sbjct: 8 SKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLEWYWTK 67
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +2
Query: 176 NTKHLRKGD--PLPPFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLT 349
N+K L+ GD P P R+Y+MR+CP AQR ++ + K+I EV+NI+L KP+W
Sbjct: 8 NSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYF 67
Query: 350 TKSAFG 367
TK+ G
Sbjct: 68 TKNYKG 73
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/83 (40%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 125 VPFRNMSAIKDSRNIN-FNTKHLRKGDPLPPFN-GKLRVYNMRYCPYAQRTILALNAKQI 298
VP R S NI N+ L G PP G R+Y+MR+CPYAQR ++ L K I
Sbjct: 63 VPIRFSSYSSVGSNIRGLNSPTLHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
Query: 299 DYEVVNIDLIDKPEWLTTKSAFG 367
EVVN++ P W KS G
Sbjct: 123 PVEVVNVNPDRSPNWYLPKSPIG 145
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 125 VPFRNMSAIKDSRNIN-FNTKHLRKGDPLPPFN-GKLRVYNMRYCPYAQRTILALNAKQI 298
VP R S NI N+ L G PP G R+Y+MR+CPYAQR ++ L K I
Sbjct: 63 VPIRFSSYSSVGSNIRGLNSPTLHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNI 122
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 254 PYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTK 355
P AQR ++ + K I +V+N+ L +KP+W +K
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSK 61
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 5505 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 5561
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 5562 VVVENSVGSDSGTVNVTVADVPE 5584
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 6034 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 6090
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 6091 VVVENSVGSDSGTVNVTVADVPE 6113
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 5715 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 5771
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 5772 VVVENSVGSDSGTVNVTVADVPE 5794
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 5505 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 5561
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 5562 VVVENSVGSDSGTVNVTVADVPE 5584
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 6034 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 6090
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 6091 VVVENSVGSDSGTVNVTVADVPE 6113
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 5715 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 5771
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 5772 VVVENSVGSDSGTVNVTVADVPE 5794
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +2
Query: 92 QVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRT 271
+ +E +PY P KD I N+K D F LR+ N Y +
Sbjct: 4924 ETIELKIPYKAYPQGEARWTKDGEKIENNSKFSITTDD--KF-ATLRISNASREDYGEYR 4980
Query: 272 ILALNAKQIDYEVVNIDLIDKPE 340
++ N+ D VN+ + D PE
Sbjct: 4981 VVVENSVGSDSGTVNVTVADVPE 5003
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 376 LTHTEGTFSCQPLRFVDQINIYNLIVNLFRV 284
+T+T GT+ C P V Y++ VNLF V
Sbjct: 480 ITYTNGTYECLPFPPVGSDIDYDIDVNLFPV 510
>Z70310-4|CAA94368.1| 347|Caenorhabditis elegans Hypothetical
protein R11A8.5 protein.
Length = 347
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 218 NGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPE 340
N KLR+Y CP+ + L+ YEVV ++ + + +
Sbjct: 63 NLKLRLYQYETCPFCCKVRAFLDYHGFSYEVVEVNPVTRSQ 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,254,852
Number of Sequences: 27780
Number of extensions: 294708
Number of successful extensions: 608
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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