Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0134
(734 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 22 6.9
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 6.9
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 6.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 6.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.1
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 562 NSNSKFKLSQ*CCTVRSFLPDVSTS 636
N +FK + CC PDV ++
Sbjct: 47 NELGRFKHTDACCRTHDMCPDVMSA 71
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 562 NSNSKFKLSQ*CCTVRSFLPDVSTS 636
N +FK + CC PDV ++
Sbjct: 52 NELGRFKHTDACCRTHDMCPDVMSA 76
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 562 NSNSKFKLSQ*CCTVRSFLPDVSTS 636
N +FK + CC PDV ++
Sbjct: 52 NELGRFKHTDACCRTHDMCPDVMSA 76
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 172 VDISAVLNCRHISKWYTS 119
VDIS ++N R+ +K YTS
Sbjct: 516 VDISKLVNKRNNAKIYTS 533
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK 292
DPL P + LR+Y Y R L L+ +
Sbjct: 157 DPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK 292
DPL P + LR+Y Y R L L+ +
Sbjct: 157 DPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK 292
DPL P + LR+Y Y R L L+ +
Sbjct: 208 DPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 238
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK 292
DPL P + LR+Y Y R L L+ +
Sbjct: 157 DPLIPVHFALRIYRNGTVNYLMRRHLILSCQ 187
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 230 RVYNMRYCPYAQRTILALNAKQID 301
R + +RY PY QR + + ++D
Sbjct: 462 RPFEVRYDPYTQRVEILDSVDRLD 485
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 284 NAKQIDYEVVNIDLIDKP 337
N+K++ Y ++NI+ I P
Sbjct: 319 NSKKLYYNIINIEQIPVP 336
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 284 NAKQIDYEVVNIDLIDKP 337
N+K++ Y ++NI+ I P
Sbjct: 330 NSKKLYYNIINIEQIPVP 347
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,025
Number of Sequences: 438
Number of extensions: 3558
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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