Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0134
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55040.1 68416.m06112 In2-1 protein, putative similar to In2-... 42 3e-04
At5g02780.1 68418.m00220 In2-1 protein, putative similar to In2-... 42 4e-04
At1g19570.1 68414.m02437 dehydroascorbate reductase, putative si... 40 0.002
At5g16710.1 68418.m01956 dehydroascorbate reductase, putative St... 39 0.003
At5g02790.1 68418.m00221 In2-1 protein, putative similar to In2-... 39 0.004
At1g75270.1 68414.m08744 dehydroascorbate reductase, putative si... 38 0.007
At5g36270.1 68418.m04375 dehydroascorbate reductase, putative si... 35 0.049
At1g53680.1 68414.m06108 glutathione S-transferase, putative sim... 34 0.11
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 33 0.26
At1g59700.1 68414.m06716 glutathione S-transferase, putative sim... 31 0.79
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 30 1.8
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 29 3.2
At5g62480.2 68418.m07842 glutathione S-transferase, putative 29 4.2
At5g62480.1 68418.m07841 glutathione S-transferase, putative 29 4.2
At5g42150.1 68418.m05131 expressed protein 28 7.4
At3g06500.1 68416.m00754 beta-fructofuranosidase, putative / inv... 28 7.4
At3g03190.1 68416.m00315 glutathione S-transferase, putative ide... 28 7.4
At1g59670.1 68414.m06711 glutathione S-transferase, putative sim... 28 7.4
>At3g55040.1 68416.m06112 In2-1 protein, putative similar to In2-1
protein, Zea mays, P49248
Length = 292
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK--QIDYEVVNIDLIDKPEWLTTK 355
+P+ F+G R+Y CP+AQR +A N K Q E+V IDL ++P W K
Sbjct: 72 EPVQVFDGSTRLYISYTCPFAQRAWIARNYKGLQNKIELVPIDLKNRPAWYKEK 125
>At5g02780.1 68418.m00220 In2-1 protein, putative similar to In2-1
[Zea mays] EMBL:X58573
Length = 237
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK--QIDYEVVNIDLIDKPEWLTTK 355
DP F+G R+Y CP+AQR + N K Q + ++V IDL ++P WL K
Sbjct: 22 DPPALFDGTTRLYISYTCPFAQRVWITRNLKGLQDEIKLVPIDLPNRPAWLKEK 75
>At1g19570.1 68414.m02437 dehydroascorbate reductase, putative
similar to GB:BAA90672 from (Oryza sativa)
Length = 213
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 251 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFG 367
CP++QR +L L K + Y++ I+L DKP+W S G
Sbjct: 20 CPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQG 58
>At5g16710.1 68418.m01956 dehydroascorbate reductase, putative
Strong similarity to dehydroascorbate reductase
[Spinacia oleracea] gi:10952512 gb:AAG24945
Length = 258
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 251 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFG 367
CP+ Q+ +L + K + Y++ +DL +KPEW S G
Sbjct: 66 CPFCQKVLLTMEEKNVPYDMKMVDLSNKPEWFLKISPEG 104
>At5g02790.1 68418.m00221 In2-1 protein, putative similar to In2-1,
Zea mays, EMBL:X58573
Length = 235
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 DPLPPFNGKLRVYNMRYCPYAQRTILALNAK--QIDYEVVNIDLIDKPEWLTTK 355
DP F+G R+Y CP+AQR + N K Q ++V +DL ++P W K
Sbjct: 20 DPPSLFDGTTRLYTSYVCPFAQRVWITRNFKGLQEKIKLVPLDLGNRPAWYKEK 73
>At1g75270.1 68414.m08744 dehydroascorbate reductase, putative
similar to GI:6939839 from [Oryza sativa]
Length = 213
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 251 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFG 367
CP++QR +L L K++ Y+ I++ DKP+W S G
Sbjct: 20 CPFSQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEG 58
>At5g36270.1 68418.m04375 dehydroascorbate reductase, putative
similar to dehydroascorbate reductase {Spinacia
oleracea} gi:10952511 gb:AF195783, PMID:11148269
Length = 217
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 251 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFG 367
CP+ QR +L L K++ Y+ ID+ KP+W S G
Sbjct: 20 CPFGQRILLTLEDKKLPYKTHLIDVSLKPDWFLAISPKG 58
>At1g53680.1 68414.m06108 glutathione S-transferase, putative
similar to GI:2853219 from [Carica papaya]
Length = 224
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 218 NGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWL 346
N K+ V + PYA RT +AL K +++EV DL +K E L
Sbjct: 5 NSKVVVLDFWASPYAMRTKVALREKGVEFEVQEEDLWNKSELL 47
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 143 SAIKDSRNINFNTKHLRKGDPLPPFNGKLRVY-NMRYCPYAQRTILALNAKQID 301
SA R + F T HL K DP G++ ++ + YC Y ILA N +D
Sbjct: 346 SACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEAFKILAKNYLDLD 399
>At1g59700.1 68414.m06716 glutathione S-transferase, putative
similar to glutathione S-transferase GB:AAF29773
GI:6856103 from [Gossypium hirsutum]
Length = 234
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 224 KLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKS 358
++++ + Y PYA R +AL K +DY+ V +L L KS
Sbjct: 6 EVKLLGVWYSPYAIRPKIALRLKSVDYDYVEENLFGSKSELLLKS 50
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 143 SAIKDSRNINFNTKHLRKGDPLPPFNGKLRVY-NMRYCPYAQRTILALNAKQID 301
SA R I F T H K DP G++ ++ + YC + ILA N +D
Sbjct: 344 SACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYLDLD 397
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 143 SAIKDSRNINFNTKHLRKGDPLPPFNGKLRVY-NMRYCPYAQRTILALNAKQID 301
SA R I F T HL K DP G++ ++ + YC + LA N +D
Sbjct: 345 SACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAKNYLDLD 398
>At5g62480.2 68418.m07842 glutathione S-transferase, putative
Length = 214
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 PYAQRTILALNAKQIDYEVVNIDLIDKPEWL 346
PY++R LAL K I Y+ V DL +K + L
Sbjct: 18 PYSKRIELALRLKSIPYQFVQEDLQNKSQTL 48
>At5g62480.1 68418.m07841 glutathione S-transferase, putative
Length = 240
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 PYAQRTILALNAKQIDYEVVNIDLIDKPEWL 346
PY++R LAL K I Y+ V DL +K + L
Sbjct: 18 PYSKRIELALRLKSIPYQFVQEDLQNKSQTL 48
>At5g42150.1 68418.m05131 expressed protein
Length = 315
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 215 FNGK-LRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPE 340
FN K + +Y CP+ + L+ +I Y+VV ++ I K E
Sbjct: 83 FNPKEVVLYQYEACPFCNKVKAFLDYNKIPYKVVEVNPISKKE 125
>At3g06500.1 68416.m00754 beta-fructofuranosidase, putative /
invertase, putative / saccharase, putative /
beta-fructosidase, putative similar to neutral invertase
[Daucus carota] GI:4200165; contains Pfam profile
PF04853: Plant neutral invertase
Length = 664
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 29 STVSLAMHLIYSSFQGVRVISQVLEYVLPYTGVPFRNMSAIKDSRNINFNTKHLRK 196
ST SL H+ SF+ + V V + V G+P R + ++ NF +RK
Sbjct: 113 STSSLDSHVNDKSFESMFVKPLVFKEVEKTEGIPKRERGNVGGGKDANFGNVGVRK 168
>At3g03190.1 68416.m00315 glutathione S-transferase, putative
identical to glutathione S-transferase GB:AAB09584 from
[Arabidopsis thaliana]
Length = 214
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 227 LRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPE 340
++VY QR +L K I++EV+++DL DK E
Sbjct: 3 VKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDL-DKLE 39
>At1g59670.1 68414.m06711 glutathione S-transferase, putative
similar to glutathione S-transferase GB:AAF29773
GI:6856103 from [Gossypium hirsutum]
Length = 233
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 248 YCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKS 358
Y P R +AL K +DY+ V DL L KS
Sbjct: 14 YSPVVIRAKIALRLKSVDYDYVEEDLFGSKSELLLKS 50
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,856,024
Number of Sequences: 28952
Number of extensions: 255794
Number of successful extensions: 483
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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