Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0133
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018091-1|AAH18091.1|  214|Homo sapiens N-6 adenine-specific DN...   213   5e-55
AL512652-2|CAH71794.1|  214|Homo sapiens novel protein protein.       213   5e-55
AK022365-1|BAB14022.1|  534|Homo sapiens protein ( Homo sapiens ...    31   3.5  
AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.     31   3.5  

>BC018091-1|AAH18091.1|  214|Homo sapiens N-6 adenine-specific DNA
           methyltransferase 2 (putative) protein.
          Length = 214

 Score =  213 bits (521), Expect = 5e-55
 Identities = 95/207 (45%), Positives = 142/207 (68%), Gaps = 1/207 (0%)
 Frame = +1

Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
           D++ P LSA   AALQEFYAEQ ++    ++   D K    I+ +ENWQLSQFWY ++T 
Sbjct: 6   DDETPQLSAHALAALQEFYAEQKQQ----IEPGEDDKYNIGII-EENWQLSQFWYSQETA 60

Query: 316 HSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYDY 495
             L +     + + G++A +S P+++  L+    +  ++ + EYD+RF ++G ++IFYDY
Sbjct: 61  LQLAQEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDY 120

Query: 496 NNPKEVPPDVH-HSYDLVVADPPFLSEECITKTSETIKLLSKNKIILCTGTIMKDIVKEL 672
           NNP ++P  +  HS+D+V+ADPP+LSEEC+ KTSET+K L++ KI+LCTG IM++   EL
Sbjct: 121 NNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTRGKILLCTGAIMEEQAAEL 180

Query: 673 LDLKLCEFQPKHRNNLTNEFSCYANFD 753
           L +K+C F P+H  NL NEF CY N+D
Sbjct: 181 LGVKMCTFVPRHTRNLANEFRCYVNYD 207


>AL512652-2|CAH71794.1|  214|Homo sapiens novel protein protein.
          Length = 214

 Score =  213 bits (521), Expect = 5e-55
 Identities = 95/207 (45%), Positives = 142/207 (68%), Gaps = 1/207 (0%)
 Frame = +1

Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
           D++ P LSA   AALQEFYAEQ ++    ++   D K    I+ +ENWQLSQFWY ++T 
Sbjct: 6   DDETPQLSAHALAALQEFYAEQKQQ----IEPGEDDKYNIGII-EENWQLSQFWYSQETA 60

Query: 316 HSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYDY 495
             L +     + + G++A +S P+++  L+    +  ++ + EYD+RF ++G ++IFYDY
Sbjct: 61  LQLAQEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDY 120

Query: 496 NNPKEVPPDVH-HSYDLVVADPPFLSEECITKTSETIKLLSKNKIILCTGTIMKDIVKEL 672
           NNP ++P  +  HS+D+V+ADPP+LSEEC+ KTSET+K L++ KI+LCTG IM++   EL
Sbjct: 121 NNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTRGKILLCTGAIMEEQAAEL 180

Query: 673 LDLKLCEFQPKHRNNLTNEFSCYANFD 753
           L +K+C F P+H  NL NEF CY N+D
Sbjct: 181 LGVKMCTFVPRHTRNLANEFRCYVNYD 207


>AK022365-1|BAB14022.1|  534|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12303 fis, clone MAMMA1001868, weakly similar to
           TRICHOHYALIN. ).
          Length = 534

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +1

Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
           D++  TL A+     ++F  E+ KR   + + +V+KK  ENI   E  +++   Y E+ +
Sbjct: 183 DKEKQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKI 242


>AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.
          Length = 1227

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +1

Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
           D++  TL A+     ++F  E+ KR   + + +V+KK  ENI   E  +++   Y E+ +
Sbjct: 74  DKEKQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKI 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,993,879
Number of Sequences: 237096
Number of extensions: 2230119
Number of successful extensions: 4200
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)