Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0133
(776 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060876-1|AAL28424.1| 223|Drosophila melanogaster GM04011p pro... 177 2e-44
AE014134-1045|AAF52340.2| 223|Drosophila melanogaster CG9154-PA... 175 6e-44
BT021935-1|AAX51640.1| 1034|Drosophila melanogaster RH03344p pro... 30 4.1
AE014296-3716|AAF51860.1| 901|Drosophila melanogaster CG32451-P... 30 4.1
AE014296-3715|AAN12202.1| 924|Drosophila melanogaster CG32451-P... 30 4.1
AE014296-3714|AAF51858.2| 1034|Drosophila melanogaster CG32451-P... 30 4.1
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein. 29 9.4
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA... 29 9.4
>AY060876-1|AAL28424.1| 223|Drosophila melanogaster GM04011p
protein.
Length = 223
Score = 177 bits (430), Expect = 2e-44
Identities = 97/225 (43%), Positives = 143/225 (63%), Gaps = 14/225 (6%)
Frame = +1
Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
D+D+ +L A+T A L EF E+SKR E + ++ K ++ F+E+WQLSQFWY +T
Sbjct: 2 DDDI-SLPADTLAILNEFLLERSKR-EAEEENQIANKTGKDAQFEEDWQLSQFWYSTETK 59
Query: 316 HSLVKVIDKVLDDRGK------VALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPD 477
H+L V+ K+L +R K +AL+SCP+L+ + R+I D TV + E+D+RFE +G D
Sbjct: 60 HALRDVVRKLLAERTKDSGDFSIALLSCPSLYKDI-REIHD--TVHIFEFDKRFEAYGTD 116
Query: 478 YIFYDYN----NPKEVPPDVHHSYDLVVADPPFLSEECITKTSETIKLLSKN----KIIL 633
++ YD N NP + + H YDL+VADPPFLS+ECI KT E I L +N K+IL
Sbjct: 117 FVHYDLNCVGSNPDYLK-EHHQQYDLIVADPPFLSQECIAKTCEIITRLQRNQKESKVIL 175
Query: 634 CTGTIMKDIVKELLDLKLCEFQPKHRNNLTNEFSCYANFDLDSVL 768
C+G +++ + L + C F+P+H NL N+F YANF+LD +
Sbjct: 176 CSGEVVEPWLTARLPVLKCSFRPEHERNLGNKFVSYANFNLDEYI 220
>AE014134-1045|AAF52340.2| 223|Drosophila melanogaster CG9154-PA
protein.
Length = 223
Score = 175 bits (426), Expect = 6e-44
Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 14/225 (6%)
Frame = +1
Query: 136 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDEKTV 315
D+D+ +L A+T A L EF E+SKR E + ++ K ++ F+E+WQLSQFWY +T
Sbjct: 2 DDDI-SLPADTLAILNEFLLERSKR-EAEEENQIANKTGKDAQFEEDWQLSQFWYSTETK 59
Query: 316 HSLVKVIDKVLDDRGK------VALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPD 477
H+L V+ K+L +R + +AL+SCP+L+ + R+I D TV + E+D+RFE +G D
Sbjct: 60 HALRDVVRKLLAERTEDSGDFSIALLSCPSLYKDI-REIHD--TVHIFEFDKRFEAYGTD 116
Query: 478 YIFYDYN----NPKEVPPDVHHSYDLVVADPPFLSEECITKTSETIKLLSKN----KIIL 633
++ YD N NP + + H YDL+VADPPFLS+ECI KT E I L +N K+IL
Sbjct: 117 FVHYDLNCVGSNPDYLK-EHHQQYDLIVADPPFLSQECIAKTCEIITRLQRNQKESKVIL 175
Query: 634 CTGTIMKDIVKELLDLKLCEFQPKHRNNLTNEFSCYANFDLDSVL 768
C+G +++ + L + C F+P+H NL N+F YANF+LD +
Sbjct: 176 CSGEVVEPWLTARLPVLKCSFRPEHERNLGNKFVSYANFNLDEYI 220
>BT021935-1|AAX51640.1| 1034|Drosophila melanogaster RH03344p protein.
Length = 1034
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1
Query: 434 VTVPLSPICLFKGTKSVGHEISATLPLSSNTLSITLTRECTVFSSYQN*LSCQFSSNKIF 255
V V LS + GT V A L T+T C VF N LSC+ + +F
Sbjct: 893 VNVLLSASIIVLGTLWVFQREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVF 952
Query: 254 SVNFLSTSSF 225
++ + F
Sbjct: 953 TIGLTTNRMF 962
>AE014296-3716|AAF51860.1| 901|Drosophila melanogaster CG32451-PA,
isoform A protein.
Length = 901
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1
Query: 434 VTVPLSPICLFKGTKSVGHEISATLPLSSNTLSITLTRECTVFSSYQN*LSCQFSSNKIF 255
V V LS + GT V A L T+T C VF N LSC+ + +F
Sbjct: 760 VNVLLSASIIVLGTLWVFQREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVF 819
Query: 254 SVNFLSTSSF 225
++ + F
Sbjct: 820 TIGLTTNRMF 829
>AE014296-3715|AAN12202.1| 924|Drosophila melanogaster CG32451-PC,
isoform C protein.
Length = 924
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1
Query: 434 VTVPLSPICLFKGTKSVGHEISATLPLSSNTLSITLTRECTVFSSYQN*LSCQFSSNKIF 255
V V LS + GT V A L T+T C VF N LSC+ + +F
Sbjct: 783 VNVLLSASIIVLGTLWVFQREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVF 842
Query: 254 SVNFLSTSSF 225
++ + F
Sbjct: 843 TIGLTTNRMF 852
>AE014296-3714|AAF51858.2| 1034|Drosophila melanogaster CG32451-PB,
isoform B protein.
Length = 1034
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1
Query: 434 VTVPLSPICLFKGTKSVGHEISATLPLSSNTLSITLTRECTVFSSYQN*LSCQFSSNKIF 255
V V LS + GT V A L T+T C VF N LSC+ + +F
Sbjct: 893 VNVLLSASIIVLGTLWVFQREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVF 952
Query: 254 SVNFLSTSSF 225
++ + F
Sbjct: 953 TIGLTTNRMF 962
>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
Length = 3503
Score = 28.7 bits (61), Expect = 9.4
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 394 VPLKRQIGDRGTVTLLEYDRRFE-VHGPDYIFY---DYN-NPKEVPPDVHHSYDLVVADP 558
+PL R+I T++++ D+ +H IF D N NP E D++H+ + VADP
Sbjct: 407 LPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADP 466
>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
protein.
Length = 3556
Score = 28.7 bits (61), Expect = 9.4
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +1
Query: 394 VPLKRQIGDRGTVTLLEYDRRFE-VHGPDYIFY---DYN-NPKEVPPDVHHSYDLVVADP 558
+PL R+I T++++ D+ +H IF D N NP E D++H+ + VADP
Sbjct: 460 LPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADP 519
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,692,624
Number of Sequences: 53049
Number of extensions: 700208
Number of successful extensions: 1747
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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