Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0133
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73428-4|CAH60777.1| 218|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical pr... 36 0.024
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 33 0.23
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 33 0.23
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 33 0.23
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 33 0.23
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 32 0.53
U61949-9|AAB03156.3| 433|Caenorhabditis elegans Hypothetical pr... 31 0.70
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 29 3.7
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 29 4.9
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 29 4.9
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z73428-4|CAH60777.1| 218|Caenorhabditis elegans Hypothetical
protein M142.8 protein.
Length = 218
Score = 163 bits (395), Expect = 2e-40
Identities = 85/219 (38%), Positives = 134/219 (61%), Gaps = 11/219 (5%)
Frame = +1
Query: 127 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDE 306
M +D+P LSA+T AAL F AEQ ++ E L ++K DE+WQLSQFWYD+
Sbjct: 1 MSDTDDIPQLSADTLAALSMFQAEQQEKIEQLQSGIIEK-------IDEDWQLSQFWYDD 53
Query: 307 KTVHSLV-KVIDKVLDDR----GKVALISCPTL---FVPLKRQIGDRGTVTLLEYDRRFE 462
+T LV + + L+ ++ +S PTL F + + +TL E+D RF
Sbjct: 54 ETSRKLVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFG 113
Query: 463 VHGP-DYIFYDYNNPKEVPPDVHHSYDLVVADPPFLSEECITKTSETIKLLSKN--KIIL 633
+ P +++ YDY +P ++P ++ +D+++ADPPFL+ EC+ KT+ +I+LL K+ K++L
Sbjct: 114 LKFPTEFVHYDYKHPTDLPAELLAKFDVIIADPPFLAAECLIKTAHSIRLLGKSDVKVLL 173
Query: 634 CTGTIMKDIVKELLDLKLCEFQPKHRNNLTNEFSCYANF 750
CTG IM+D L+ + F+P+H NNL N+FSC+AN+
Sbjct: 174 CTGAIMEDYASRLMAMHRTSFEPRHANNLANDFSCFANY 212
>Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical
protein F33A8.4 protein.
Length = 467
Score = 36.3 bits (80), Expect = 0.024
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Frame = +1
Query: 286 SQFWYDEKTVHSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEV 465
SQF++ +T+ + K ++K D + I P +F + R + V LL+YD+RF
Sbjct: 212 SQFFFSTETLDVITKAVEKSKVDG--ILCIGAPRIFENI-RALHPEKNVFLLDYDKRFAK 268
Query: 466 HGP--DYIFY----DYNNPKEVPPDVHHSYD-----LVVADPPF-LSEECITKTSETIK 606
P Y Y D+ K P + +D L++ DPPF + E + K+ E +K
Sbjct: 269 FFPSKQYAQYSMLVDHFFDKIAEPKLMEFFDKSKSILMITDPPFGVFMEPLLKSIEKMK 327
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 127 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDE 306
+E DEDVP ++ F+ L + + + S+ E+ +EVD + E + EN YD+
Sbjct: 510 LENDEDVPQVTGHQFSVLGQIHIDLSRYHELGRFVEVDSEHKEMLEGSENDARVPIKYDK 569
Query: 307 KT 312
++
Sbjct: 570 QS 571
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 127 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDE 306
+E DEDVP ++ F+ L + + + S+ E+ +EVD + E + EN YD+
Sbjct: 510 LENDEDVPQVTGHQFSVLGQIHIDLSRYHELGRFVEVDSEHKEMLEGSENDARVPIKYDK 569
Query: 307 KT 312
++
Sbjct: 570 QS 571
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 127 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDE 306
+E DEDVP ++ F+ L + + + S+ E+ +EVD + E + EN YD+
Sbjct: 510 LENDEDVPQVTGHQFSVLGQIHIDLSRYHELGRFVEVDSEHKEMLEGSENDARVPIKYDK 569
Query: 307 KT 312
++
Sbjct: 570 QS 571
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 127 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEVDKKLTENILFDENWQLSQFWYDE 306
+E DEDVP ++ F+ L + + + S+ E+ +EVD + E + EN YD+
Sbjct: 510 LENDEDVPQVTGHQFSVLGQIHIDLSRYHELGRFVEVDSEHKEMLEGSENDARVPIKYDK 569
Query: 307 KT 312
++
Sbjct: 570 QS 571
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 562 FLSEECITKTSETIKLLSKNKIILCTGTIMKDIVKELLDLKLC 690
F S ECI K + IK + + CTG + + E++ +K C
Sbjct: 611 FASSECIKKEHKLIKHTADKRFFKCTGCKKRTVCFEMMPVKHC 653
>U61949-9|AAB03156.3| 433|Caenorhabditis elegans Hypothetical
protein F49E8.1 protein.
Length = 433
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 697 GIRIILNLAIPL-LYPSLWYRCIKLFYFSKAI*LFPMFL 584
GI + +AI L L PSL RC++ +F + + L PMFL
Sbjct: 244 GINTVREIAIILELDPSLVARCVRNLHFYECVSLVPMFL 282
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +1
Query: 268 DENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVALISCP-------TLFVPLKRQIGDRG 426
D N Q+++F+ D+ S V + DDRG + CP T+ + +K IG R
Sbjct: 229 DLNGQINEFYKDKVKRKSGVHALIYKKDDRGDKLIFDCPSILGTSMTMALEIKDVIGHRS 288
Query: 427 TV----TLLEYDRRFEVHGPDYIFYDYNN 501
T L YD P D+N+
Sbjct: 289 VAENDPTALSYDELVSKQLPTVDIDDHNS 317
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 776 HQFKTLSKSKLA*HENSLVKLFRCFGWNSHNFKSSNSFTISFI 648
HQ + + K+A HE + K+F + F++SNSF + I
Sbjct: 12 HQVQNCNNEKIA-HERKMEKVFEFLAEDKKTFEASNSFERTLI 53
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -1
Query: 446 YSSRVTVPLSPICLFKGTKSVGHEISATLPLSS-NTLSITLTRECTVFSSYQN*LSCQFS 270
Y+S + SPI L + +G + ++ +PL + S + C + +YQN C +
Sbjct: 535 YASIEVIGRSPIALTRERTFIGTDQNSNIPLQNFGVCSNWASTHCMI--AYQNPSFCLY- 591
Query: 269 SNKIFSVNFLSTSSFT 222
+N + +VN + FT
Sbjct: 592 ANHVVAVNRIRYKEFT 607
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 199 QSKRQEILVKLEVDKKLTEN-ILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVALI 375
Q ++L ++ LTEN +LFD N +L +F + +V + + R K+
Sbjct: 875 QKSNSDLLNYFKLRTSLTENRVLFDRNGELKEFGNISEIAAEFFEVRRDLYEKRLKIQKE 934
Query: 376 SCPTLFVPLKRQI 414
C + ++ Q+
Sbjct: 935 ECEAKLIYVENQL 947
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 37 NRWV*RCEKDFRCTKTRYLI*ESIATSSCAMEADE 141
+RW RC +D CT L E +CAM E
Sbjct: 100 SRWSKRCSRDEDCTHQEELCIEGKCCKTCAMRRRE 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,826,781
Number of Sequences: 27780
Number of extensions: 385753
Number of successful extensions: 1064
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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