Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0131
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 33   FGAYGEIESINVKTDPNTGRSRGFAF 110
            + A G +E++NV+TDP     R F +
Sbjct: 2121 YNADGMVETMNVRTDPTHTFQRNFTY 2146


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 7/30 (23%)
 Frame = +2

Query: 401  KNNWWK---GGRCEACNTNPT-SY---CDT 469
            KN +W    G  CE+CN +P  SY   CDT
Sbjct: 924  KNGYWNIVSGNGCESCNCDPIGSYNASCDT 953


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 33   FGAYGEIESINVKTDPNTGRSRGFAF 110
            + A   +E++NV+TDP     R F +
Sbjct: 2111 YNADSMVETMNVRTDPTHTFQRNFTY 2136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,214
Number of Sequences: 2352
Number of extensions: 14002
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)