Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0131
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 134 8e-32
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 134 8e-32
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 122 3e-28
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 122 3e-28
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 99 4e-21
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 99 4e-21
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 99 4e-21
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 94 1e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 94 1e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 62 5e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 62 5e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 62 5e-10
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 60 2e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 53 2e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 52 4e-07
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 52 4e-07
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 52 4e-07
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 52 4e-07
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 52 4e-07
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 52 4e-07
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 51 8e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 2e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 1e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 1e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 2e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 2e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 2e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 47 2e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 47 2e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 2e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 2e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 46 3e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 4e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 45 7e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 2e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 6e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 41 8e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.001
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.002
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.018
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.018
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.031
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.054
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.054
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.054
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 35 0.071
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.071
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 35 0.071
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 35 0.071
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.071
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.071
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.071
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 34 0.094
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 34 0.094
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 34 0.094
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 34 0.094
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.22
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.22
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.22
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.29
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 33 0.29
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.29
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.87
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 31 0.87
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 31 0.87
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 31 0.87
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 1.2
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.5
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.5
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 30 1.5
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.7
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 8.1
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 134 bits (323), Expect = 8e-32
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
E +++L HF YGE+ VK D GRSRGFAF+ F E +AA E TI K
Sbjct: 39 EVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKS 98
Query: 183 VDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI F
Sbjct: 99 VEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVF 158
Query: 360 ESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
E E+ + K+T G +E DVK+A P
Sbjct: 159 EEEESADKASSQTKQTFGTRECDVKKAVP 187
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 396 PKRTIGGKEVDVKRA 440
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 134 bits (323), Expect = 8e-32
Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
E +++L HF YGE+ VK D GRSRGFAF+ F E +AA E TI K
Sbjct: 39 EVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKS 98
Query: 183 VDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI F
Sbjct: 99 VEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVF 158
Query: 360 ESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
E E+ + K+T G +E DVK+A P
Sbjct: 159 EEEESADKASSQTKQTFGTRECDVKKAVP 187
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 396 PKRTIGGKEVDVKRA 440
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 122 bits (294), Expect = 3e-28
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK
Sbjct: 55 QTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
Query: 183 VDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 335
+DPK K + K+F+GGLS+ + ++++ +F +G + + + FDK +
Sbjct: 115 IDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRH 174
Query: 336 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
+GF F+TF+S++V + + + I GK V+ K+A P
Sbjct: 175 RGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQP 211
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = +3
Query: 159 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 339 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
GF FITF V+ +L + + GK++D K A P
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFP 122
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
+T ++++ +F YG++E + D T R RGF F+ F + E DKV H IN K V
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 186 DPKKAKAR 209
+ KKA+ +
Sbjct: 205 ECKKAQPK 212
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 122 bits (294), Expect = 3e-28
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+ EH ++ KK
Sbjct: 55 QTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK 114
Query: 183 VDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 335
+DPK K + K+F+GGLS+ + ++++ +F +G + + + FDK +
Sbjct: 115 IDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRH 174
Query: 336 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
+GF F+TF+S++V + + + I GK V+ K+A P
Sbjct: 175 RGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQP 211
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = +3
Query: 159 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 339 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
GF FITF V+ +L + + GK++D K A P
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFP 122
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
+T ++++ +F YG++E + D T R RGF F+ F + E DKV H IN K V
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 186 DPKKAKAR 209
+ KKA+ +
Sbjct: 205 ECKKAQPK 212
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
TTD +R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 186 DPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 332
DPK+A R K ++V G+ + ++D + +F+++GT+ + E+ DK +
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQK 153
Query: 333 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 437
+GF F+TF+ V+ + + G DV++
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 396 PKRTIGGKEVDVKRATP 446
I GK VD KRA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 188
T+ L ++F YG + + D T + RGF F+ F +S+D+ + H +N + D
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 189 PKKAKAR 209
+K ++
Sbjct: 186 VRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
TTD +R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 186 DPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 332
DPK+A R K ++V G+ + ++D + +F+++GT+ + E+ DK +
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQK 153
Query: 333 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 437
+GF F+TF+ V+ + + G DV++
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 396 PKRTIGGKEVDVKRATP 446
I GK VD KRA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 188
T+ L ++F YG + + D T + RGF F+ F +S+D+ + H +N + D
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 189 PKKAKAR 209
+K ++
Sbjct: 186 VRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
TTD +R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 186 DPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 332
DPK+A R K ++V G+ + ++D + +F+++GT+ + E+ DK +
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQK 153
Query: 333 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 437
+GF F+TF+ V+ + + G DV++
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 396 PKRTIGGKEVDVKRATP 446
I GK VD KRA P
Sbjct: 84 RPHIIDGKTVDPKRAVP 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 188
T+ L ++F YG + + D T + RGF F+ F +S+D+ + H +N + D
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 189 PKKAKAR 209
+K ++
Sbjct: 186 VRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 21 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 200
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 201 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 347
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 348 FITFESEQVVNDLLKTPKRTIGGKEVDVKR 437
F+TF+ V+ + + G DV++
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 261 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 440
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 441 TP 446
P
Sbjct: 61 VP 62
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 188
T+ L ++F YG + + D T + RGF F+ F +S+D+ + H +N + D
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 189 PKKAKAR 209
+K ++
Sbjct: 148 VRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Frame = +3
Query: 21 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 200
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 201 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 347
R K ++V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 348 FITFESEQVVNDLLKTPKRTIGGKEVDVKR 437
F+TF+ V+ + + G DV++
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 150
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 261 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 440
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 441 TP 446
P
Sbjct: 61 VP 62
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 188
T+ L ++F YG + + D T + RGF F+ F +S+D+ + H +N + D
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 189 PKKAKAR 209
+K ++
Sbjct: 148 VRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 396 PKRTIGGKEVDVKRATP 446
+GGK VD KRA P
Sbjct: 110 RPHKLGGKTVDSKRAIP 126
Score = 60.1 bits (139), Expect = 2e-09
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TTD++L ++F +G + V DPNT SRGF F+ F + S + M H + K
Sbjct: 59 DTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKT 118
Query: 183 VDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILEVE 305
VD K+A R K+ + G+++ + S D +R +F FGT+ +VE
Sbjct: 119 VDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVE 178
Query: 306 MPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 434
+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 179 I-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 218
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 396 PKRTIGGKEVDVKRATP 446
+GGK VD KRA P
Sbjct: 130 RPHKLGGKTVDSKRAIP 146
Score = 60.1 bits (139), Expect = 2e-09
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TTD++L ++F +G + V DPNT SRGF F+ F + S + M H + K
Sbjct: 79 DTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKT 138
Query: 183 VDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILEVE 305
VD K+A R K+ + G+++ + S D +R +F FGT+ +VE
Sbjct: 139 VDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVE 198
Query: 306 MPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 434
+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 199 I-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 238
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 396 PKRTIGGKEVDVKRATP 446
+GGK VD KRA P
Sbjct: 131 RPHKLGGKTVDSKRAIP 147
Score = 60.1 bits (139), Expect = 2e-09
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TTD++L ++F +G + V DPNT SRGF F+ F + S + M H + K
Sbjct: 80 DTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKT 139
Query: 183 VDPKKAKARHG------------------KIFVGGLSSEI-SDDEIRNFFSEFGTILEVE 305
VD K+A R K+ + G+++ + S D +R +F FGT+ +VE
Sbjct: 140 VDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVE 199
Query: 306 MPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVK 434
+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 200 I-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 239
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNK 179
+ + L + F A G + SI V D T S G+A++ F+ P ++ M ++ K
Sbjct: 42 DVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGK 101
Query: 180 KV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
+ DP ++ G IF+ L I + I + FS FG IL ++ D+ K
Sbjct: 102 PMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSK 160
Query: 339 GFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATP 446
G+ F+ FE+E+ N + K + GK+V V + P
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQP 197
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
ET D + L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 326 ETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 173
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 174 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 314
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 315 DKTKNQRKGFCFITFESEQ 371
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNK 179
+ + L + F A G + SI V D T S G+A++ F+ P ++ M ++ K
Sbjct: 42 DVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGK 101
Query: 180 KV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
+ DP ++ G IF+ L I + I + FS FG IL ++ D+ K
Sbjct: 102 PMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSK 160
Query: 339 GFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATP 446
G+ F+ FE+E+ N + K + GK+V V + P
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQP 197
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
ET D + L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 326 ETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 173
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 174 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 314
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 315 DKTKNQRKGFCFITFESEQ 371
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+TTD+ + +F G + +K + G S+GF F+ + +KV+A +H I+ ++
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRR 241
Query: 183 VDPKKAKARH-------GKIFVGGLSSEISDDEIRNFF-SEFGTILEVEMPFDK-TKNQR 335
D K R +IFVG L+ ++ + ++R F E + +E + D
Sbjct: 242 CDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPF 301
Query: 336 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 446
+GF F+T S + ++ T+ G V + A P
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQP 338
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 96 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 209
RGFAF+ + E+ +++++ G T+N V A+ R
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAAGEHTINNKKV 185
T +E+R F + GEIES + D TG+S G+ F+ + + +++ V + + NK +
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTI 113
Query: 186 D-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
P + + ++V G+ ++ E+ + F FG I+ + D KG F
Sbjct: 114 KVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGF 173
Query: 351 ITFESEQVVNDLLKT 395
+ F+ + + +KT
Sbjct: 174 VRFDKKDEADVAIKT 188
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 395
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 396 PKRTIGGKEVDV--KRATP 446
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 53.6 bits (123), Expect = 1e-07
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNK 179
+ ++ L + F G + SI V D + S G+A++ F+ P ++ + I+ +
Sbjct: 67 DVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGR 126
Query: 180 KV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
+ DP +A +G IF+ L I + + + FS FG IL ++ D N K
Sbjct: 127 PMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-K 185
Query: 339 GFCFITFESE-------QVVNDLLKTPKRTIGGK 419
G+ F+ FE+E + VN +L + K+ GK
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
+ D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 353 DLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTIN 173
+K + D F +G I S V TD + G S+G+ F+ F+ S I+KV M + +
Sbjct: 158 NKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVY 216
Query: 174 NKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKN 329
K P+ + + + +FV + +++ FS+FG I + D +
Sbjct: 217 VGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQG 275
Query: 330 QRKGFCFITFESEQVVNDLLK 392
+ KGF F+ F + ++
Sbjct: 276 KPKGFGFVAFADQDAAGQAVE 296
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI-DKVMAA 155
E D+E L F +GEI S V TD G+ +GF F+ F +A E + D ++
Sbjct: 247 EHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEG 305
Query: 156 GEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDEIRNFFSE 281
+ ++ + K ++ K ++V + +++DD +R+ FS
Sbjct: 306 TDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSS 365
Query: 282 FGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRA 440
FGTI ++ D+ + KGF F+ FE E+ + + IG K + V A
Sbjct: 366 FGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALA 418
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 53.6 bits (123), Expect = 1e-07
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AAGEHTINNK 179
+ ++ L + F G + SI V D + S G+A++ F+ P ++ + I+ +
Sbjct: 67 DVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGR 126
Query: 180 KV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 338
+ DP +A +G IF+ L I + + + FS FG IL ++ D N K
Sbjct: 127 PMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-K 185
Query: 339 GFCFITFESE-------QVVNDLLKTPKRTIGGK 419
G+ F+ FE+E + VN +L + K+ GK
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
+ D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 353 DLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES----IDKV--MAAGEHTIN 173
+K + D F +G I S V TD + G S+G+ F+ F+ S I+KV M + +
Sbjct: 158 NKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVY 216
Query: 174 NKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKN 329
K P+ + + + +FV + +++ FS+FG I + D +
Sbjct: 217 VGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQG 275
Query: 330 QRKGFCFITFESEQVVNDLLK 392
+ KGF F+ F + ++
Sbjct: 276 KPKGFGFVAFADQDAAGQAVE 296
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI-DKVMAA 155
E D+E L F +GEI S V TD G+ +GF F+ F +A E + D ++
Sbjct: 247 EHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEG 305
Query: 156 GEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDEIRNFFSE 281
+ ++ + K ++ K ++V + +++DD +R+ FS
Sbjct: 306 TDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSS 365
Query: 282 FGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRA 440
FGTI ++ D+ + KGF F+ FE E+ + + IG K + V A
Sbjct: 366 FGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALA 418
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Frame = +3
Query: 45 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 212
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 37 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 96
Query: 213 ---GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVN 380
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + +
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 156
Query: 381 DLLK 392
L+
Sbjct: 157 TALE 160
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 398
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 399 KR-TIGGKEVDVKRAT 443
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 155
E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 110 EVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Frame = +3
Query: 45 GEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH--- 212
G + S+N+ D T +GF F+ F E D + + K + KA A
Sbjct: 47 GPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM 106
Query: 213 ---GKIFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVN 380
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + +
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASD 166
Query: 381 DLLK 392
L+
Sbjct: 167 TALE 170
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 398
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 399 KR-TIGGKEVDVKRAT 443
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 155
E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 120 EVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Frame = +3
Query: 108 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 269
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 270 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN-----DLLKTPKRTIGGKEVDV 431
FFS + G + V + DK + KGF F+ F+ + V+ + +K KR + +V +
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIKMEKRDLRITKV-M 323
Query: 432 KRATPTLLATATHDT 476
K+ T + TA T
Sbjct: 324 KKGHLTKIQTAKKRT 338
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK 179
E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+ +A TI +
Sbjct: 256 EITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKME 313
Query: 180 KVDPKKAK 203
K D + K
Sbjct: 314 KRDLRITK 321
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 308
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R G
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GC 184
Query: 345 CFITF 359
F+TF
Sbjct: 185 AFVTF 189
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
T +L +F YG I+S+N+ DP+TG RGFA I F + + +K + H I+ +V
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRV 95
Query: 186 D 188
D
Sbjct: 96 D 96
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/105 (22%), Positives = 45/105 (42%)
Frame = +3
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 344
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 345 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPTLLATATHDTL 479
ITF+S+ N ++ I G VDV+ P + D +
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIPLISKNKKKDLM 113
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 396 PKRTIGGKEVDVKRA 440
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
T+DK L ++F +G+IE V TD NT +SRG+ F+ K S ++ I+ +K
Sbjct: 46 TSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKA 105
Query: 186 D 188
+
Sbjct: 106 N 106
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 392
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 393 TPKR 404
TPK+
Sbjct: 126 TPKQ 129
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++ +K+
Sbjct: 77 TTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI----------RKL 125
Query: 186 DPKKAKARHGKIFVGGLSSEISDDEIR 266
PK+ + R K+ +G +I+ + +
Sbjct: 126 TPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 392
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 393 TPKR 404
TPK+
Sbjct: 127 TPKQ 130
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 185
TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++ +K+
Sbjct: 78 TTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI----------RKL 126
Query: 186 DPKKAKARHGKIFVGGLSSEISDDEIR 266
PK+ + R K+ +G +I+ + +
Sbjct: 127 TPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID--------KVMAAGEH 164
+ + R F YG + S N+ D +T S+G F+ F ++I+ KV+ H
Sbjct: 68 ETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNIKVIEGMHH 127
Query: 165 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 335
+ K D + R K+F+G LS + +++ +R F++FG I + + D+ R
Sbjct: 128 PVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR 182
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 171 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 350
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 351 ITF 359
+TF
Sbjct: 101 VTF 103
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 389
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 390 K 392
+
Sbjct: 378 E 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 30 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 209
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 365
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 366 EQVVNDLLKTPKR 404
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 389
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 390 K 392
+
Sbjct: 378 E 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 30 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 209
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 365
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 366 EQVVNDLLKTPKR 404
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+T ++L + F A G + + + TD TGRS+G ++ F ES+ +A +
Sbjct: 35 DTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAP 94
Query: 183 VDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNFFSEFGTIL 296
+ ++ A + + V L +I + IR+ F FG I
Sbjct: 95 LQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIE 154
Query: 297 EVEMPFDKTKNQRKGFCFITFES 365
++++ D + R GF ITF +
Sbjct: 155 KIDLEVDSNRENR-GFATITFRN 176
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 174 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 353
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 354 TFESEQVVNDLLKTPKRTIGGKEVDVKR 437
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+T ++L + F A G + + + TD TGRS+G ++ F ES+ +A +
Sbjct: 180 DTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAP 239
Query: 183 VDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNFFSEFGTIL 296
+ ++ A + + V L +I + IR+ F FG I
Sbjct: 240 LQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIE 299
Query: 297 EVEMPFDKTKNQRKGFCFITFES 365
++++ D + R GF ITF +
Sbjct: 300 KIDLEVDSNRENR-GFATITFRN 321
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +3
Query: 174 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 353
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 354 TFESEQVVNDLLKTPKRTIGGKEVDVKR 437
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 389
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 390 K 392
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +3
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 389
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 390 K 392
+
Sbjct: 378 E 378
Score = 42.3 bits (95), Expect = 4e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +3
Query: 30 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 209
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 210 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 365
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 366 EQVVNDLLKTPKR 404
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = +3
Query: 162 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 341
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 342 FCFITFESEQ 371
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 44.0 bits (99), Expect = 1e-04
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEH 164
+ +++ L+ F +GE+ V D T +S+G+ F+ F ++ + +A G+
Sbjct: 145 DVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKR 204
Query: 165 TI--------NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 296
+ N+++ K KA + ++VG +S + +D ++R+ FS +G I
Sbjct: 205 AVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIA 264
Query: 297 EVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEVDVKRATPTLLATATHD 473
EV + K QR + F+ +E ++ +++ + + G +V + +
Sbjct: 265 EVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQVRCSWGRTQAVPNQALN 318
Query: 474 TLPLRLS 494
LP+ LS
Sbjct: 319 PLPIDLS 325
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKAR 209
F G+I + + DP +G SRG+AF+ + E + H I+ K
Sbjct: 220 FEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIA 279
Query: 210 HGKIFVGGLSSEISDDEI----RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 377
+ ++F+G + S DEI + ++ +P D K + +GFCF+ F +
Sbjct: 280 NTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTA 338
Query: 378 NDL 386
+D+
Sbjct: 339 SDI 341
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 46.0 bits (104), Expect = 3e-05
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
TT+ E+R A + SI N+ RGFA++V + + + + + +
Sbjct: 604 TTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQALLKDRVPVKGRP 660
Query: 183 V-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 326
+ DP+K K+FV + + +DDE++ FS+FGT+ V K
Sbjct: 661 MFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-D 719
Query: 327 NQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRATPTLLATATH 470
+ KG F+ F++E + + K + +E++V + P + +H
Sbjct: 720 GKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNPPVKKDKSH 768
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGE 161
E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 162 H-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 287
+ N + P +K ++ +++V + ++S+ ++++ F FG
Sbjct: 172 NLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFG 231
Query: 288 TILEVEMPFDKTKNQRKGFCFITFES 365
I++ ++ T +GF ++ F +
Sbjct: 232 EIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGE 161
E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 162 H-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 287
+ N + P +K ++ +++V + ++S+ ++++ F FG
Sbjct: 172 NLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFG 231
Query: 288 TILEVEMPFDKTKNQRKGFCFITFES 365
I++ ++ T +GF ++ F +
Sbjct: 232 EIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------ESIDKVMAAGE 161
E + LR F +G I+SIN+ DP TG + FAF+ ++ P ES++ M G
Sbjct: 112 EIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGR 171
Query: 162 H-------------TINNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 287
+ N + P +K ++ +++V + ++S+ ++++ F FG
Sbjct: 172 NLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFG 231
Query: 288 TILEVEMPFDKTKNQRKGFCFITFES 365
I++ ++ T +GF ++ F +
Sbjct: 232 EIVKCQLARAPTGRGHRGFGYLEFNN 257
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
TT+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 225 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 192 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 34.7 bits (76), Expect = 0.071
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 162 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 335
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 336 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 425
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 186 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 365
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 366 EQVV-NDLLKTPKRTIGGKEVDVKRATP 446
E+ N + K + GK+V V + P
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQP 134
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
ET D + L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 263 ETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 173
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 174 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 314
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 315 DKTKNQRKGFCFITFESEQ 371
D+ + KGF F+ FE +
Sbjct: 288 DE-NGRSKGFGFVCFEKPE 305
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+ ++E+R F +G++E +++KT NT +AF++F+ + + A E +
Sbjct: 179 DVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIR 234
Query: 183 VDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 305
+ K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 235 AGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 392
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 393 TPKRTI--GGKEVDV 431
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+ ++E+R F +G++E +++KT NT +AF++F+ + + A E +
Sbjct: 179 DVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIR 234
Query: 183 VDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 305
+ K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 235 AGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 392
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 393 TPKRTI--GGKEVDV 431
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+ ++E+R F +G++E +++KT NT +AF++F+ + + A E +
Sbjct: 156 DVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIR 211
Query: 183 VDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILEVE 305
+ K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 212 AGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 392
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 393 TPKRTI--GGKEVDV 431
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDK 143
+K+LR F +G+I + D TG +G AF+ + K +++
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNR 101
Query: 144 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 323
M +++ PK K K+F+G LS + S+DE+R F+ FG + EV +
Sbjct: 102 AMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGA 159
Query: 324 KNQRKGFCFITFE 362
KG F+ ++
Sbjct: 160 DGASKGCAFVKYK 172
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 44.8 bits (101), Expect = 7e-05
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----------------KAPESIDK 143
+K+LR F +G+I + D TG +G AF+ + K +++
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHDQKTLPGMNR 101
Query: 144 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 323
M +++ PK K K+F+G LS + S+DE+R F+ FG + EV +
Sbjct: 102 AMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGA 159
Query: 324 KNQRKGFCFITFE 362
KG F+ ++
Sbjct: 160 DGASKGCAFVKYK 172
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 149
+TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 15 QTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 368
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 225 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 365
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 186 EMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEH 164
E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + G
Sbjct: 32 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 91
Query: 165 TI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 284
TI N K D + + ++VG ++S +++DEIR F+ F
Sbjct: 92 TIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASF 150
Query: 285 GTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 425
G I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 151 GRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 207 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEH 164
E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + G
Sbjct: 42 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 101
Query: 165 TI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 284
TI N K D + + ++VG ++S +++DEIR F+ F
Sbjct: 102 TIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASF 160
Query: 285 GTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 425
G I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 161 GRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 207 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEH 164
E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + G
Sbjct: 145 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 204
Query: 165 TI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 284
TI N K D + + ++VG ++S +++DEIR F+ F
Sbjct: 205 TIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASF 263
Query: 285 GTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 425
G I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 264 GRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 207 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 187
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA------GEH 164
E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + G
Sbjct: 113 EVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRR 172
Query: 165 TI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 284
TI N K D + + ++VG ++S +++DEIR F+ F
Sbjct: 173 TIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASF 231
Query: 285 GTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 425
G I EV + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 232 GRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 207 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 326
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 3 ETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 131
ET D + L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 266 ETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 37.1 bits (82), Expect = 0.013
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 173
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 174 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 314
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 315 DKTKNQRKGFCFITFESEQ 371
D+ + KGF F+ FE +
Sbjct: 291 DE-NGRSKGFGFVCFEKPE 308
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 33 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 212
F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A N + + + H
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV--DNFNGISLHKRMIRVDH 113
Query: 213 GKIFVGGLSSEISDDEIRNFFSE 281
+ + E +DDE + + E
Sbjct: 114 VEEYKVPKYKEDADDETKRLWEE 136
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--K 182
T +E+ HF G + + ++ D +G +GFA++ F E + +A + + + K
Sbjct: 90 TAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIK 149
Query: 183 VDPKK 197
VDPK+
Sbjct: 150 VDPKR 154
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 192 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 368
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F E E
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 369 QVVNDLLKTPKRTIGGK-EVDVKRATPTLLAT 461
+ N L T G + +VD KR ++T
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKPGMST 162
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 398
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 399 KRT-IGGKEVDV 431
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI---N 173
E T+ ++ D F YG+I++I++ D TG +G+A + ++ + ++ + T
Sbjct: 65 EATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQ 124
Query: 174 NKKVD 188
N KVD
Sbjct: 125 NVKVD 129
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
++T E+ +HF G++ + + D TG + FAF+ F+ ES+ + N+K
Sbjct: 56 KSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRK 115
Query: 183 V 185
+
Sbjct: 116 I 116
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 119
T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 18 TEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 368
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 207 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 383
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 384 LLKTPKRTIGGKEVDVKRATP 446
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
+ T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 21 DVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 119
+TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 14 QTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 368
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/76 (21%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 392
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 393 TPKRTIGGKEVDVKRA 440
+ +G + + ++++
Sbjct: 264 MDGKYVGNRPIKLRKS 279
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
T+++LR F YG+I ++K G+ RGFAF+ F S +A T N K
Sbjct: 15 TEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAKSNQTFFNSK 71
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 134
T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 290 TKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 371
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 389
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 311
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 396 PK-RTIGGKEVDVKRATP 446
+ +GG+ V + + P
Sbjct: 56 LNGKELGGERVILDYSKP 73
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 396 PK-RTIGGKEVDVKRATP 446
+ +GG+ V + + P
Sbjct: 56 LNGKELGGERVILDYSKP 73
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 396 PK-RTIGGKEVDVKRATP 446
+ +GG+ V + + P
Sbjct: 56 LNGKELGGERVILDYSKP 73
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 189 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 368
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 369 QVVNDLLKT-PKRTIGGKEVDVKRA 440
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 189 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 368
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 369 QVVNDLLKT-PKRTIGGKEVDVKRA 440
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.071
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 182
+ T+K+L D F YG+I + V T+ +G AFI F E+ ++ A E + N
Sbjct: 249 QVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER---AAERSFNKTF 299
Query: 183 VDPKKAKARHGK 218
+ K+ R G+
Sbjct: 300 IKGKRLTIRWGE 311
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 303 TEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 119
+TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 119
+TT +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 303 TEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 278 TEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 359
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 152
T+ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 281 TEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVD 188
+++L F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 189 PKKAKARHGKI 221
++A K+
Sbjct: 122 VRRATPTRRKL 132
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 231 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 410
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 411 GGKEVDV 431
G + ++V
Sbjct: 68 GSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +3
Query: 231 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 410
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 411 GGKEVDV 431
G + ++V
Sbjct: 68 GSRYIEV 74
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 12 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA-GEHTINNKKVD 188
+++L F AYG + S+ + T N S+GF F+ + ES +K AA E + + ++
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 189 PKKAKARHGKI 221
++A K+
Sbjct: 122 VRRATPTRRKL 132
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 392
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 392
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 392
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 156 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 332
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 333 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 434
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 156 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 332
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 333 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 434
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 149
+T +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 66 STIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 189 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 299
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 143
TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 365
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 143
TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 365
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 143
TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 365
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.9 bits (69), Expect = 0.50
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Frame = +3
Query: 144 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL-------- 296
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPE 280
Query: 297 ----EVEMPFDKTKNQR--KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPTLLA 458
E K R G+ F+ F E+ V +L+ + + ++ ++PT+
Sbjct: 281 HNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVNACE--FYEDKYYLQLSSPTMTD 338
Query: 459 TATHDTLPLRLSD 497
A P RLSD
Sbjct: 339 KAV-QVRPWRLSD 350
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 36 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG----EHTINNKKVDPK 194
G YG++ + + DP +G A + F ++ + ++ H NNK+V+ K
Sbjct: 387 GHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIK 443
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 377
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 378 NDLLK-TPKRTIGGKEVDVKRA 440
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 395
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 396 PKRTIGGKEV 425
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 6 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 149
+T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 72 STIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNK 179
+ +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A + + +
Sbjct: 19 DVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGR 74
Query: 180 KV 185
++
Sbjct: 75 RI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 ETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGEHTINNK 179
+ +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A + + +
Sbjct: 19 DVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGR 74
Query: 180 KV 185
++
Sbjct: 75 RI 76
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 164
T +E+ + FG +G + I V NT +RG AF+V+ E I A EH
Sbjct: 31 TTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAKTACEH 76
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 252 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 374
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 219 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 320
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 9 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 149
T KEL+ +FGAYG+I + +D + G F I F S+D ++
Sbjct: 44 TSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDVLL 88
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 403 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 290
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 42 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 221
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 222 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 371
++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 216 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 311
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 93 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 212
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,326,507
Number of Sequences: 27780
Number of extensions: 328886
Number of successful extensions: 1131
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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