Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0127
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 175 3e-44
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 173 7e-44
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 172 2e-43
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 170 7e-43
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 169 2e-42
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 163 1e-40
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 55 5e-08
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 54 1e-07
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 51 7e-07
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 51 7e-07
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 51 7e-07
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 51 7e-07
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 50 2e-06
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 48 6e-06
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 47 1e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 47 1e-05
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 46 3e-05
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 44 1e-04
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 43 2e-04
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 42 3e-04
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 42 3e-04
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 42 4e-04
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 42 4e-04
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 42 4e-04
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 42 4e-04
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 42 5e-04
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 42 5e-04
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 41 7e-04
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 41 7e-04
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 41 0.001
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 40 0.001
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 40 0.002
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 40 0.002
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 39 0.003
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 39 0.004
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 38 0.005
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 38 0.007
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 38 0.007
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 37 0.011
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 37 0.011
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 37 0.011
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 37 0.011
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 34 0.081
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 33 0.14
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 33 0.14
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 33 0.25
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 32 0.43
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 31 0.57
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 31 1.00
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 30 1.7
At1g55915.1 68414.m06413 expressed protein similar to Hypothetic... 29 2.3
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 29 4.0
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 7.0
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 28 7.0
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 27 9.3
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 175 bits (425), Expect = 3e-44
Identities = 75/139 (53%), Positives = 103/139 (74%)
Frame = +3
Query: 141 SGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYS 320
S VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 321 LKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRR 500
LK+ C YP++PPT RF SRI+M CVN TG+VD+++ +LA WQR YT++ +L ++++
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKK 126
Query: 501 LMTLKDNMKLSQPPEGSLF 557
M N KL QPPEG+ F
Sbjct: 127 EMAASHNRKLVQPPEGTFF 145
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 173 bits (422), Expect = 7e-44
Identities = 74/144 (51%), Positives = 107/144 (74%)
Frame = +3
Query: 126 MANPSSGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 305
+ + S VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
Query: 306 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 485
R+Y LK+ C YP++PPT RF SR++M CVN +TG+VD ++ +LA WQR+YT++ +L
Sbjct: 63 GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122
Query: 486 QEVRRLMTLKDNMKLSQPPEGSLF 557
++++ M+ N KL QPPEG+ F
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEGTCF 146
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 172 bits (418), Expect = 2e-43
Identities = 71/142 (50%), Positives = 106/142 (74%)
Frame = +3
Query: 126 MANPSSGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 305
M++ + VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG I+GPP T YE
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 306 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 485
+++ LK+ CG YP+ PPT RF +RI+M CVN +TG+V+ P+L W+R+YT++ +L
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120
Query: 486 QEVRRLMTLKDNMKLSQPPEGS 551
++++ M N KL+QPPEG+
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGN 142
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 170 bits (414), Expect = 7e-43
Identities = 75/140 (53%), Positives = 103/140 (73%), Gaps = 1/140 (0%)
Frame = +3
Query: 141 SGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPYENRMY 317
S VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 66
Query: 318 SLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVR 497
LK+ C YP++PPT RF SRI+M CVN TG+VD+++ +LA WQR YT++ +L +++
Sbjct: 67 QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 126
Query: 498 RLMTLKDNMKLSQPPEGSLF 557
+ M N KL QPPEG+ F
Sbjct: 127 KEMAASHNRKLVQPPEGTFF 146
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 169 bits (411), Expect = 2e-42
Identities = 74/145 (51%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
Frame = +3
Query: 126 MANPSSGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPY 302
+ + S VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVH 62
Query: 303 ENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 482
E R+Y LK+ C YP++PPT RF SR++M CVN +TG+VD ++ +LA WQR+YT++ +
Sbjct: 63 EGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDI 122
Query: 483 LQEVRRLMTLKDNMKLSQPPEGSLF 557
L ++++ M+ N KL QPPEG+ F
Sbjct: 123 LVQLKKEMSTSHNRKLVQPPEGTCF 147
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 163 bits (395), Expect = 1e-40
Identities = 69/142 (48%), Positives = 102/142 (71%)
Frame = +3
Query: 126 MANPSSGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 305
M + VVVPRNFRLL ELE+G+KG+GDGT+S+G++ DD+ + WTG I+GP T YE
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 306 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 485
+++ LK+ CG YP+ PPT RF SRI+M CVN + G+VD P+L+ W+R++T++ +L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 486 QEVRRLMTLKDNMKLSQPPEGS 551
++++ M N KL+QP EG+
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGN 142
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 54.8 bits (126), Expect = 5e-08
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQT 413
S D T + I GP T Y N +++LKI+ RYP +PP F + I H N NS
Sbjct: 38 SGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGR 97
Query: 414 GLVDNRQVPILARWQRDYTIKTVLQEVRRLMT 509
+D +P WQ I TVL +R L++
Sbjct: 98 ICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 422
DD + WT +I GP TPYE ++ L YP +PP RF+++I V+ +TG +
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
Query: 423 DNRQVPILAR-WQRDYTIKTVLQEVRRLM 506
+ IL W +T+++V + + LM
Sbjct: 90 ---CLDILKNAWSPAWTLQSVCRAIIALM 115
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLV 422
D + HW +I GP TP++ + L + YP++PP RF+SR+ H N + +
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89
Query: 423 DNRQVPILARWQRDYTIKTVLQEVRRLM 506
D Q +W Y + VL ++ L+
Sbjct: 90 DILQ----NQWSPIYDVAAVLTSIQSLL 113
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 51.2 bits (117), Expect = 7e-07
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 156 PRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 335
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 336 GTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRRLM 506
YP++PPT RF+SR+ H N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 51.2 bits (117), Expect = 7e-07
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 156 PRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 335
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 336 GTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRRLM 506
YP++PPT RF+SR+ H N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 51.2 bits (117), Expect = 7e-07
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +3
Query: 156 PRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 335
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 336 GTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRRLM 506
YP++PPT RF+SR+ H N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 434
LT TG I GP TPYE + + I YP EPP +F +++ ++SQ+G +
Sbjct: 32 LTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAI---C 88
Query: 435 VPILA-RWQRDYTIKTVLQEVRRLMT 509
+ IL +W T+KT L ++ L++
Sbjct: 89 LDILKDQWSPALTLKTALVSIQALLS 114
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 434
L HW IIGP TPYE ++ L I + YP +PP F +RI+ +C N T +
Sbjct: 65 LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIY-HC-NVDT--AGDLS 120
Query: 435 VPILA-RWQRDYTIKTVLQEVRRL 503
V IL W TI VLQ +R +
Sbjct: 121 VNILRDSWSPALTITKVLQAIRSI 144
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK S G ++D + HW I+GPP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDP-PSNCSAGPVAED---MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F ++++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/98 (29%), Positives = 46/98 (46%)
Frame = +3
Query: 264 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 443
WT +I GP TPYE M++L I+ T YP +PP F + I+ +N + + N +
Sbjct: 39 WTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN---IL 95
Query: 444 LARWQRDYTIKTVLQEVRRLMTLKDNMKLSQPPEGSLF 557
+W ++ VL + L+ + P G LF
Sbjct: 96 KDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLF 133
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK I G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 112
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +3
Query: 132 NPSSGVVVPRNFRLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENR 311
N G++ + R+L EL+ QK + S G ++D + HW I+GP +PY
Sbjct: 23 NLDRGILEMASKRILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGG 78
Query: 312 MYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQ 488
++ + I YP +PP F +++ +NS + + IL +W TI VL
Sbjct: 79 VFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLL 134
Query: 489 EVRRLMT 509
+ L+T
Sbjct: 135 SICSLLT 141
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 243 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 395
D+ + W+ IIGPP T YE + + YP+ PPT RF S I H N
Sbjct: 30 DEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPN 81
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 234 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 380
+S D + W+ IIGPP T YE ++ + YP+ PPT RF S
Sbjct: 59 QSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTS 107
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ VNS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVP 440
HW I+GP +PY ++++ I+ + YP +PP F ++++ ++S+ + +
Sbjct: 33 HWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSIC----LD 88
Query: 441 IL-ARWQRDYTIKTVLQEVRRLMT 509
IL +W T VL + L+T
Sbjct: 89 ILKEQWSPAPTTSKVLLSICSLLT 112
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTG 416
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+ ++ + G
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLG 86
Query: 417 LVDNRQVPILA-RWQRDYTIKTVLQEVRRLMT 509
+ + IL +W I+TVL ++ L++
Sbjct: 87 RI---CLDILKDKWSPALQIRTVLLSIQALLS 115
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 237 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTG 416
S + + ++ MI+GP ++PYE ++ L++ YP P RF+++I+ ++ + G
Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLG 86
Query: 417 LVDNRQVPILA-RWQRDYTIKTVLQEVRRLMT 509
+ + IL +W I+TVL ++ L++
Sbjct: 87 RI---CLDILKDKWSPALQIRTVLLSIQALLS 115
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVP 440
HW I+GP +PY ++ + I YP +PP F +++ +NS N +
Sbjct: 32 HWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSN----GNICLD 87
Query: 441 ILA-RWQRDYTIKTVLQEVRRLMT 509
IL +W TI VL + L+T
Sbjct: 88 ILKDQWSPALTISKVLLSICSLLT 111
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 443
W G I G T +E Y L + YP +PP +F C + + N + I
Sbjct: 67 WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKF----ETCCFHPNVDVYGNICLDI 122
Query: 444 LA-RWQRDYTIKTVLQEVRRLM 506
L +W Y ++T+L ++ L+
Sbjct: 123 LQDKWSSAYDVRTILLSIQSLL 144
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 264 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVP 440
W + GP PYE ++++ + +YP EPP F ++I H N S+ G + V
Sbjct: 62 WEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNI--SEIGEI---FVD 116
Query: 441 IL-ARWQRDYTIKTVLQEVRRLMT 509
IL +RW TI VL + +++
Sbjct: 117 ILGSRWSSALTINLVLLSICSILS 140
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 434
+ ++ MI+GP ++PYE ++ L++ YP P RF+++I+ ++ + G +
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRI---C 56
Query: 435 VPILA-RWQRDYTIKTVLQEVRRLMT 509
+ IL +W I+TVL ++ L++
Sbjct: 57 LDILKDKWSPALQIRTVLLSIQALLS 82
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 237 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 389
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 348 PDEPPTARFISRIHMNCVNS 407
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 243 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 395
D+ + W+ I+GPP T YE ++ + YP PPT F S + H N
Sbjct: 31 DEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPN 82
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 276 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARW 455
I GP TPYEN ++ +K+ +P PP F+++I V S + N + W
Sbjct: 46 IEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVN---TLKKDW 102
Query: 456 QRDYTIKTVLQEVRRLM 506
++ VL VR L+
Sbjct: 103 NPSLGLRHVLSVVRCLL 119
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 443
W G I G T +E Y L + YP + P +F C + L N + I
Sbjct: 68 WKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF----ETCCFHPNVDLYGNICLDI 123
Query: 444 LA-RWQRDYTIKTVLQEVRRLM 506
L +W Y ++T+L ++ L+
Sbjct: 124 LQDKWSSAYDVRTILLSIQSLL 145
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 422
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS +
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSIC 85
Query: 423 DNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
+ IL +W T+ VL + L+T
Sbjct: 86 ----LDILKEQWSPALTVSKVLLSICSLLT 111
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 243 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 422
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS +
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSIC 85
Query: 423 DNRQVPIL-ARWQRDYTIKTVLQEVRRLMT 509
+ IL +W T+ VL + L+T
Sbjct: 86 ----LDILKEQWSPALTVSKVLLSICSLLT 111
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 37.1 bits (82), Expect = 0.011
Identities = 29/118 (24%), Positives = 52/118 (44%)
Frame = +3
Query: 168 RLL*ELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 347
R+L E+++ Q D +S LE + + W I GP T +E +Y +I+ Y
Sbjct: 15 RILQEVKEMQANPSDDFMSLPLEEN----IFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 348 PDEPPTARFISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQEVRRLMTLKDN 521
P +PP+ ++ N++ L + P WQ ++++T L + M N
Sbjct: 71 PFKPPSFMLLTPNGRFETNTKICLSISNYHP--EHWQPSWSVRTALVALIAFMPTSPN 126
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 380
L WT + G P T Y N Y L++E YP E P F+S
Sbjct: 43 LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVS 84
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 377
L W + G P T Y N Y+L++E YP E P F+
Sbjct: 43 LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +3
Query: 240 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGL 419
+DD+ + + T GP + Y+ ++ +K+E YP + P+ F+++I+ V+ +G
Sbjct: 26 NDDLQMFYVT--FHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGA 83
Query: 420 V 422
V
Sbjct: 84 V 84
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 377
L W +IG P T Y N Y L+++ YP E P F+
Sbjct: 43 LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFL 83
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 282 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 422
GP + YE ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 276 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 380
++G P TPY + ++ I +YP EPP + S
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHS 732
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 255 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 374
L W + G P T Y N Y L++E YP E P F
Sbjct: 43 LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 282 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 422
GP + Y+ ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 273 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 404
+IIG TPY + ++ I+ YP PP + S RI+ N N
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN 352
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 273 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVNSQTGLV 422
+IIG TPY + ++ I+ YP PP + S RI+ N N LV
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLV 1004
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 273 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 380
+IIG TPY + ++ I+ YP PP + S
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHS 675
>At1g55915.1 68414.m06413 expressed protein similar to Hypothetical
30.6 kDa protein in ACT5-YCK1 intergenic region
(Swiss-Prot:P38838) [Saccharomyces cerevisiae]; similar
to Yhr134wp (GI:500671) [Saccharomyces cerevisiae]
Length = 404
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 353 IRVSCSTFNFKGVHSILVGCPWWANNHSSPMSKSH 249
IR +C++ N K V C W+N HS P S SH
Sbjct: 236 IRETCTSVNGKSVKR----CNSWSNAHSCPPSSSH 266
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = +3
Query: 240 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISR-IHMNCVNSQTG 416
D + L W I G T +E + L + YP +PP +F H N S T
Sbjct: 34 DGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTV 93
Query: 417 LVDNRQVPILARWQRDYTIKTVLQEVRRLM 506
+ W+ T+K +L ++ L+
Sbjct: 94 CLSILNEDY--GWRPAITVKQILVGIQDLL 121
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 309 RMYSLKIECGTRYPDEPPTARFISRI 386
R+ ++ I C T+YPD PT ++R+
Sbjct: 584 RLLNIGISCTTQYPDSRPTMPEVTRL 609
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 273 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 404
+IIG TPY + ++ I YP PP + S RI+ N N
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN 413
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 273 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 380
+I+G TPY++ ++ + YP PP+A + S
Sbjct: 885 VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHS 920
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,268,977
Number of Sequences: 28952
Number of extensions: 321076
Number of successful extensions: 779
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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