Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0126
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1; ...   105   9e-22
UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1; ...    84   3e-15
UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ...    73   6e-12
UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;...    69   9e-11
UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B homo...    67   3e-10
UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:...    66   5e-10
UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila melanogaster|...    64   3e-09
UniRef50_Q652R5 Cluster: Putative uncharacterized protein P0603C...    56   9e-07
UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2 pro...    49   8e-05
UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY0192...    42   0.009
UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa g...    40   0.049
UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY0656...    36   1.1  
UniRef50_A0A3F1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q6QIS8 Cluster: Tail sheath protein gp18; n=1; Klebsiel...    33   7.5  
UniRef50_Q9RXX4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.9  
UniRef50_Q3JJA5 Cluster: YD repeat protein; n=4; Burkholderia ps...    32   9.9  
UniRef50_A3ZPB2 Cluster: PepSY-associated TM helix; n=2; Plancto...    32   9.9  

>UniRef50_Q5C0F6 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 102

 Score =  105 bits (252), Expect = 9e-22
 Identities = 51/76 (67%), Positives = 58/76 (76%)
 Frame = +3

Query: 126 SHSRGVSFPISE*RRALSTNAGTRKMVNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRGE 305
           +H R VS P +  R + S    TRKMVNYAW+GRSQ K  WR+VA+LTCKS+V  GYRGE
Sbjct: 27  AHHRPVS-PAAPGRWSTSARVRTRKMVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRGE 85

Query: 306 RLIEPSSSWFRPKFPS 353
           RLIEPSSSWF PKFPS
Sbjct: 86  RLIEPSSSWFPPKFPS 101


>UniRef50_Q59KL1 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 83.8 bits (198), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 41/49 (83%)
 Frame = -2

Query: 321 MVRLVFRPYTQFRRSICTSESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 175
           MVRLVFRPYTQ RRSICTSE LR+S RVS  F L RHSSPSFGSQ LCS
Sbjct: 1   MVRLVFRPYTQIRRSICTSEPLRASTRVSSGFTLFRHSSPSFGSQQLCS 49


>UniRef50_A7RNM9 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 53

 Score = 72.9 bits (171), Expect = 6e-12
 Identities = 33/44 (75%), Positives = 34/44 (77%)
 Frame = -3

Query: 308 SFAPIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSICA 177
           SFAPIP  DDRFARQNRY PP  FPL S   GIVHHLSGP+ CA
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPLASPYSGIVHHLSGPNRCA 44


>UniRef50_UPI0000DA4670 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 440

 Score = 68.9 bits (161), Expect = 9e-11
 Identities = 36/61 (59%), Positives = 40/61 (65%)
 Frame = -3

Query: 296 IPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSICAQSAPSFTDWKRDASGVRKSR 117
           +  SDDRFARQ+RYGPP  FPL S  PGIVHHLSGP+  A+ AP      RD   VR  R
Sbjct: 115 LTGSDDRFARQDRYGPPPEFPLASPCPGIVHHLSGPNAYAR-APPPRRGGRDGPVVRPRR 173

Query: 116 T 114
           T
Sbjct: 174 T 174


>UniRef50_UPI0000F2E2E1 Cluster: PREDICTED: similar to SH2-B
           homolog,; n=2; Mammalia|Rep: PREDICTED: similar to SH2-B
           homolog, - Monodelphis domestica
          Length = 394

 Score = 67.3 bits (157), Expect = 3e-10
 Identities = 39/69 (56%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
 Frame = -3

Query: 362 QLS*GKLRTEPATRWF-D*SFAPIPS--SDDRFARQNRYGPPSGFPLTST*PGIVHHLSG 192
           QLS  KL     TRW  D    P  +  SDDRFARQ+RYGPP  FPL S  PGIVHHLSG
Sbjct: 28  QLS-SKLSYSGPTRWVPDSRVLPDTTMGSDDRFARQDRYGPPPEFPLASPCPGIVHHLSG 86

Query: 191 PSICAQSAP 165
           P+  A + P
Sbjct: 87  PNTHAHAPP 95


>UniRef50_A3LSK4 Cluster: Predicted protein; n=4; Ascomycota|Rep:
           Predicted protein - Pichia stipitis (Yeast)
          Length = 81

 Score = 66.5 bits (155), Expect = 5e-10
 Identities = 30/41 (73%), Positives = 31/41 (75%)
 Frame = -3

Query: 308 SFAPIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPS 186
           SFAPIP  DDRFARQNRY PP  FP  S   GIVHHLSGP+
Sbjct: 1   SFAPIPKFDDRFARQNRYEPPPEFPSASPYSGIVHHLSGPN 41


>UniRef50_Q6NKM5 Cluster: LD48059p; n=1; Drosophila
           melanogaster|Rep: LD48059p - Drosophila melanogaster
           (Fruit fly)
          Length = 46

 Score = 63.7 bits (148), Expect = 3e-09
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +2

Query: 176 EHKCWDPKDGELCLVRSKSGETLMEDRSDSDVQIDRRN 289
           EH C DPKDGEL L+R KSGETLMEDR+ SDVQID +N
Sbjct: 9   EHICCDPKDGELYLIRLKSGETLMEDRNSSDVQIDCQN 46


>UniRef50_Q652R5 Cluster: Putative uncharacterized protein
           P0603C10.50; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0603C10.50 - Oryza sativa subsp. japonica (Rice)
          Length = 248

 Score = 55.6 bits (128), Expect = 9e-07
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = -3

Query: 299 PIPSSDDRFARQNRYGPPSGFPLTST*PGIVHHLSGPSI 183
           PIP SD RF RQ R+ PP  FPLTS    I+HHLSGP +
Sbjct: 38  PIPKSDKRFVRQYRFEPPLDFPLTSPRSSIIHHLSGPDM 76



 Score = 37.1 bits (82), Expect = 0.35
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -1

Query: 358 YHEGNFGRNQLLDGSISLSPL 296
           Y EGNFG NQLLDGSI L P+
Sbjct: 19  YPEGNFGGNQLLDGSIGLIPI 39


>UniRef50_UPI0000F2EBE7 Cluster: PREDICTED: similar to COL5A2
           protein; n=9; Monodelphis domestica|Rep: PREDICTED:
           similar to COL5A2 protein - Monodelphis domestica
          Length = 774

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 284 DDRFARQNRYGPPSGFPLTST*PGIVH 204
           DDRFARQ+RYGPP  FPL S  PGIVH
Sbjct: 20  DDRFARQDRYGPPPEFPLASPCPGIVH 46


>UniRef50_Q7RN94 Cluster: Putative uncharacterized protein PY01927;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01927 - Plasmodium yoelii yoelii
          Length = 193

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -1

Query: 346 NFGRNQLLDGSISLSPLYPVPTIDLHVRIATVLHQGFP*LRPDQA 212
           +F  NQL+  SISLSPL  +   DLHV I ++LHQ F  L+   A
Sbjct: 149 SFENNQLIGFSISLSPLNVIEMNDLHVSINSILHQAFTRLQSHHA 193


>UniRef50_A3LSK3 Cluster: Predicted protein; n=7; Fungi/Metazoa
           group|Rep: Predicted protein - Pichia stipitis (Yeast)
          Length = 94

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = -3

Query: 584 FRRVNXTFGSSHSASSAYQNWPT 516
           FR  N TFGSS  ASSAYQ WPT
Sbjct: 38  FRHFNFTFGSSRIASSAYQKWPT 60



 Score = 39.5 bits (88), Expect = 0.065
 Identities = 26/72 (36%), Positives = 34/72 (47%)
 Frame = -1

Query: 628 CHERPTPFMVSHERFLGALTXRLVHPTAPVLLTKIGPLGTVIRSPASSFE*AGVLTHLKF 449
           C +  TPF+VS ER                   +  P  +       S +  G+LT+LKF
Sbjct: 23  CLDELTPFVVSDERVFRHFNFTFGSSRIASSAYQKWPTKSSSFICPRSIKQQGLLTYLKF 82

Query: 448 ENRLRSFRPQCL 413
           ENRLRSF+PQ L
Sbjct: 83  ENRLRSFQPQDL 94


>UniRef50_Q7RAD4 Cluster: Putative uncharacterized protein PY06566;
           n=3; cellular organisms|Rep: Putative uncharacterized
           protein PY06566 - Plasmodium yoelii yoelii
          Length = 114

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -3

Query: 584 FRRVNXTFGSSHSASSAYQNWPTWHRHQISG 492
           FR +    G+S  ASSAYQ WPTW     SG
Sbjct: 8   FRHLIQALGASLIASSAYQKWPTWSYFIYSG 38


>UniRef50_A0A3F1 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus salivarius subsp. salivarius UCC118|Rep:
           Putative uncharacterized protein - Lactobacillus
           salivarius subsp. salivarius (strain UCC118)
          Length = 305

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -1

Query: 469 VLTHLKFENRLRSFRPQCL*SFALPDETV--LKFYIDASYHEGNFGRNQLLDGSISLSP 299
           VLT+ + +N+ R++ P    SFA   ETV  LK++I   Y++GNF     LD    L+P
Sbjct: 74  VLTN-QDQNKNRNYLPWM--SFAATPETVTTLKYHIGEDYYDGNFRFTFYLDSIEGLAP 129


>UniRef50_Q6QIS8 Cluster: Tail sheath protein gp18; n=1; Klebsiella
           phage KPP95|Rep: Tail sheath protein gp18 - Klebsiella
           phage KPP95
          Length = 657

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 414 RHWGRNDLNLFSNFKWVRTPAYSNDEAGDLMTVPSGPILVSRTGAV 551
           R   +N   L  N +W  T A SN E GD +TV     +V  TG+V
Sbjct: 86  REAAKNASPLVDNIEWTITTAGSNYEVGDKITVKYADQVVDDTGSV 131


>UniRef50_Q9RXX4 Cluster: Putative uncharacterized protein; n=1;
           Deinococcus radiodurans|Rep: Putative uncharacterized
           protein - Deinococcus radiodurans
          Length = 122

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 435 LNLFSNFKWVRTPAYSNDEAGDLMTVPSGPILVSRTGAVG*TKRXVNAPKKRS 593
           L+L+ N KW RTP  SN   G+     + P +     +VG +K  V   K  S
Sbjct: 5   LSLYQNPKWSRTPTVSNTGKGETQLQRASPKVTPFISSVGSSKSQVRQYKSFS 57


>UniRef50_Q3JJA5 Cluster: YD repeat protein; n=4; Burkholderia
           pseudomallei|Rep: YD repeat protein - Burkholderia
           pseudomallei (strain 1710b)
          Length = 425

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 420 NASNHSLYRMRLF*NFISTPAIMRETSD--GTSY*MVRLVFRPYTQFRRSICTSESLRSS 247
           NA   S  RMRL    +S P ++ + +D  GTS+ MVR     +T F   +  S SL + 
Sbjct: 353 NAKMSSPERMRLVIRRLSLPLLVMQVADLVGTSHGMVRKWHSMFTDFADRLEPSGSLSAR 412

Query: 246 IRV 238
           IR+
Sbjct: 413 IRL 415


>UniRef50_A3ZPB2 Cluster: PepSY-associated TM helix; n=2;
           Planctomycetaceae|Rep: PepSY-associated TM helix -
           Blastopirellula marina DSM 3645
          Length = 387

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 545 ASSAYQNWPTWHRHQISGFIVRVSRSSHPFKV*E*VEVVSAPMPLIIRFTG 393
           AS  Y  WP W     + F +R  +S   + + + V V++AP+  ++ FTG
Sbjct: 157 ASGIYLWWPLWKHSWRAAFALR-DKSRFTYDLHKLVGVIAAPILFVVAFTG 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,968,697
Number of Sequences: 1657284
Number of extensions: 13275724
Number of successful extensions: 27279
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27275
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)