Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0125
(393 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 137 6e-32
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 136 1e-31
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 130 7e-30
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 8e-28
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 115 3e-25
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 114 5e-25
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 111 3e-24
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 1e-23
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 103 1e-21
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 101 5e-21
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 89 2e-17
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 76 2e-13
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 75 6e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 73 1e-12
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 69 2e-11
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 68 7e-11
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 68 7e-11
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 64 1e-09
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 64 1e-09
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 62 4e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 5e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 61 9e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 59 3e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 5e-08
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 58 5e-08
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 58 8e-08
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 56 2e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 2e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 53 2e-06
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 52 4e-06
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 52 5e-06
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 51 9e-06
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 9e-06
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 50 2e-05
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 44 8e-04
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 38 0.091
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 34 1.1
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 33 1.5
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 2.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 32 3.4
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 32 3.4
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 31 6.0
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 6.0
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 31 6.0
UniRef50_Q8EZB6 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 31 6.0
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 137 bits (332), Expect = 6e-32
Identities = 66/79 (83%), Positives = 70/79 (88%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 337 KQTRAGQRTRFKAFVAIGD 393
KQTRAGQRTRFKAFVAIGD
Sbjct: 89 KQTRAGQRTRFKAFVAIGD 107
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 136 bits (330), Expect = 1e-31
Identities = 66/79 (83%), Positives = 70/79 (88%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 337 KQTRAGQRTRFKAFVAIGD 393
KQTRAGQRTRFKAFVAIGD
Sbjct: 114 KQTRAGQRTRFKAFVAIGD 132
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 130 bits (315), Expect = 7e-30
Identities = 58/79 (73%), Positives = 72/79 (91%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 337 KQTRAGQRTRFKAFVAIGD 393
KQTRAGQRTRFKAFV IGD
Sbjct: 87 KQTRAGQRTRFKAFVVIGD 105
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 8e-28
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 337 KQTRAGQRTRFK 372
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 115 bits (277), Expect = 3e-25
Identities = 57/72 (79%), Positives = 60/72 (83%)
Frame = +1
Query: 178 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 357
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 358 RTRFKAFVAIGD 393
TRFKAFV IGD
Sbjct: 61 HTRFKAFVPIGD 72
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 114 bits (275), Expect = 5e-25
Identities = 52/78 (66%), Positives = 63/78 (80%)
Frame = +1
Query: 160 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 339
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 340 QTRAGQRTRFKAFVAIGD 393
QT AGQR RFKAFV +GD
Sbjct: 105 QTTAGQRMRFKAFVVVGD 122
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 111 bits (268), Expect = 3e-24
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 342
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 343 TRAGQRTRFKAFVAIGD 393
TRAGQRTRFKA V +GD
Sbjct: 90 TRAGQRTRFKAVVVVGD 106
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 1e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 337 KQTRAGQRTRFK 372
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 103 bits (247), Expect = 1e-21
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +1
Query: 166 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 345
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 346 RAGQRTRFKAFVAIGD 393
AGQ+TRFKA+V +GD
Sbjct: 120 CAGQKTRFKAYVVVGD 135
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 101 bits (242), Expect = 5e-21
Identities = 50/59 (84%), Positives = 52/59 (88%)
Frame = +1
Query: 217 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 393
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRD 60
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 337 KQTRAGQRTRFKAFVAIGD 393
KQTRAGQ+TR KA V +GD
Sbjct: 75 KQTRAGQKTRIKAVVVVGD 93
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 76.2 bits (179), Expect = 2e-13
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = +1
Query: 181 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 360
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 361 TRFKAFVAIGD 393
R KA VAIGD
Sbjct: 95 PRLKASVAIGD 105
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 74.5 bits (175), Expect = 6e-13
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +1
Query: 205 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 384
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 385 IGD 393
I D
Sbjct: 191 IRD 193
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 73.3 bits (172), Expect = 1e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +1
Query: 181 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 357
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ 108
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 69.3 bits (162), Expect = 2e-11
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +1
Query: 169 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 348
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 349 AGQRTRFKAFVAIGD 393
AG+ +R+K V +G+
Sbjct: 70 AGEISRYKVLVIMGN 84
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 67.7 bits (158), Expect = 7e-11
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +1
Query: 175 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 354
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 355 QRTRFKAFVAIGD 393
+R +F+ VA+G+
Sbjct: 117 RRVKFRCVVAVGN 129
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 67.7 bits (158), Expect = 7e-11
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +1
Query: 175 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 354
W P T+LG+ V EG+ID ++ LP+KE E++D L P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVD-QLVPDLEDEVLDINMVQRMTDSG 65
Query: 355 QRTRFKAFVAIGD 393
+R +F+ VA+G+
Sbjct: 66 RRVKFRCVVAVGN 78
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 63.7 bits (148), Expect = 1e-09
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -1
Query: 393 VANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFS 214
V +G++ LE L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D +
Sbjct: 70 VTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLA 129
Query: 213 FANKTAEFGDRNPLFLVFL 157
A++ + G NP VFL
Sbjct: 130 IAHQATQLGHWNPFLRVFL 148
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 63.7 bits (148), Expect = 1e-09
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +1
Query: 169 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 348
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 349 AGQRTRFKAFVAIGD 393
+G+R + +G+
Sbjct: 62 SGRRMNYSITAVVGN 76
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 62.1 bits (144), Expect = 4e-09
Identities = 30/79 (37%), Positives = 50/79 (63%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 337 KQTRAGQRTRFKAFVAIGD 393
+ ++G+R R++A V +G+
Sbjct: 69 RMHKSGRRARYRATVVVGN 87
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 61.7 bits (143), Expect = 5e-09
Identities = 35/77 (45%), Positives = 45/77 (58%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 342
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 343 TRAGQRTRFKAFVAIGD 393
T GQ TRFKA VA G+
Sbjct: 101 TSNGQSTRFKAIVATGN 117
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 60.9 bits (141), Expect = 9e-09
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +1
Query: 217 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAI 387
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTI 57
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.8 bits (136), Expect = 3e-08
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 342
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 343 TRAGQRTRFKAFVAIGD 393
T GQ TRFKA VA G+
Sbjct: 82 TSNGQSTRFKAIVAAGN 98
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 5e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 264
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 58.4 bits (135), Expect = 5e-08
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 172 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFL---GPSLNDEVLKIMPVQKQ 342
EW P TKLG +V+EG+I + I+ IKE EIID L N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLLPEVNARENQEVLDIALTVRM 74
Query: 343 TRAGQRTRFKAFVAIGD 393
T +G+R RF+ A+G+
Sbjct: 75 TDSGRRVRFRVLAAVGN 91
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 57.6 bits (133), Expect = 8e-08
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1
Query: 178 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 357
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 358 RTRFKAFVAI 387
TRF +F I
Sbjct: 52 WTRFNSFDTI 61
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 56.4 bits (130), Expect = 2e-07
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +1
Query: 307 DEVLKIMPVQKQTRAGQRTRFKAFVAIGD 393
DEVLKIMPVQKQT AGQRTRF AFVAIGD
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGD 76
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 2e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 175 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 288
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 52.8 bits (121), Expect = 2e-06
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Frame = +1
Query: 169 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK--------- 321
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 322 ----IMPVQKQTRAGQRTRFKAFVAIGD 393
QK+T G +TR++ +GD
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 52.0 bits (119), Expect = 4e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 202 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 381
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 382 AIGD 393
+G+
Sbjct: 60 VVGN 63
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 51.6 bits (118), Expect = 5e-06
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +1
Query: 166 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 345
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 346 RAGQRTRFKAFVAIG 390
Q+TRFKA V +G
Sbjct: 101 CTDQQTRFKASVTVG 115
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 50.8 bits (116), Expect = 9e-06
Identities = 35/74 (47%), Positives = 41/74 (55%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 336
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 337 KQTRAGQRTRFKAF 378
QRTR K F
Sbjct: 73 -----NQRTRIKVF 81
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 9e-06
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 323 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 162
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 50.0 bits (114), Expect = 2e-05
Identities = 37/77 (48%), Positives = 43/77 (55%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 342
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 343 TRAGQRTRFKAFVAIGD 393
T R FK FV+I D
Sbjct: 112 TWLPSRP-FKDFVSIRD 127
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 44.4 bits (100), Expect = 8e-04
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = -1
Query: 393 VANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFS 214
V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R Q + + D +
Sbjct: 151 VTNDDDSLESGSLTSSGLLLDRLDVHNFILQVW-QQLVNDLEFLDWQRVQEDFFDGRDLA 209
Query: 213 FANKTAEFGDRNP--LFLV 163
+++ + G+ NP FLV
Sbjct: 210 GLHQSTQLGNWNPTLFFLV 228
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 37.5 bits (83), Expect = 0.091
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 369 ETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAE 193
E L G L L RHD+ +L+ + +E +NDL D R N ++ + S ++ AE
Sbjct: 55 EPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKGLYLSCLHQAAE 114
Query: 192 FGDRNPLFLVFL 157
F R PLFL+ L
Sbjct: 115 FRGRMPLFLLHL 126
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 280 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 393
D L ++ + ++I +K+T AGQ+TRFKAFV D
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRD 38
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 33.5 bits (73), Expect = 1.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 163 DQKEWVPVTKLGRLVREGKI 222
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 2.6
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 184 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 26
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.3 bits (70), Expect = 3.4
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = -1
Query: 348 TCLFLYR-HDL*NLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 199
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 32.3 bits (70), Expect = 3.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 292 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 393
GP ++VL++ + K + G+ F+A VA+GD
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGD 101
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 31.5 bits (68), Expect = 6.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 223 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 366
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPR 128
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 154 RAHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHRLEQR 35
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 372 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEIND 274
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_Q8EZB6 Cluster: Glycerol-3-phosphate dehydrogenase
[NAD(P)+] (EC 1.1.1.94) (NAD(P)H- dependent
glycerol-3-phosphate dehydrogenase); n=6; Bacteria|Rep:
Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC
1.1.1.94) (NAD(P)H- dependent glycerol-3-phosphate
dehydrogenase) - Leptospira interrogans
Length = 335
Score = 31.5 bits (68), Expect = 6.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 157 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMP 330
KE E VP+ + + G + + I+ LP K + + GPS E+++ +P
Sbjct: 91 KEYLPEKVPIVSASKGIENGTLRLVSEIFESELPEKYHSYLSYLSGPSFAKEIIQKVP 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,596,829
Number of Sequences: 1657284
Number of extensions: 5605369
Number of successful extensions: 17129
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 16077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16972
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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