Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0120
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006460-1|AAH06460.1| 359|Homo sapiens hexamethylene bis-aceta... 58 4e-08
AB021179-1|BAA36166.1| 359|Homo sapiens HEXIM1 protein protein. 58 4e-08
BC025970-1|AAH25970.1| 286|Homo sapiens HEXIM2 protein protein. 48 3e-05
BC012474-1|AAH12474.1| 286|Homo sapiens hexamthylene bis-acetam... 48 3e-05
BC003531-1|AAH03531.1| 286|Homo sapiens HEXIM2 protein protein. 48 3e-05
AY598322-1|AAT06733.1| 286|Homo sapiens L3 protein. 48 3e-05
AK056946-1|BAB71319.1| 286|Homo sapiens protein ( Homo sapiens ... 48 3e-05
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa... 39 0.019
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein. 39 0.019
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein. 39 0.019
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ... 39 0.019
BC014625-1|AAH14625.1| 401|Homo sapiens EIF3S10 protein protein. 39 0.019
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ... 39 0.019
AK002004-1|BAA92030.1| 401|Homo sapiens protein ( Homo sapiens ... 38 0.044
BC018941-1|AAH18941.1| 137|Homo sapiens transmembrane protein 1... 35 0.31
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 35 0.31
BC011760-1|AAH11760.1| 137|Homo sapiens transmembrane protein 1... 35 0.31
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 35 0.31
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 35 0.31
D86977-1|BAA13213.2| 1256|Homo sapiens KIAA0224 protein. 34 0.41
BC008340-1|AAH08340.1| 1227|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 34 0.41
BC004235-1|AAH04235.1| 1227|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 34 0.41
AF038391-1|AAC39729.1| 1227|Homo sapiens pre-mRNA splicing facto... 34 0.41
AC004682-1|AAC27431.1| 1227|Homo sapiens pre-mRNA splicing facto... 34 0.41
AB111886-1|BAC98374.1| 1571|Homo sapiens KIAA2034 protein protein. 34 0.41
BC127816-1|AAI27817.1| 416|Homo sapiens Unknown (protein for IM... 34 0.54
U33201-1|AAA75516.1| 321|Homo sapiens mdm2-C protein. 33 1.2
EU076748-1|ABT17085.1| 144|Homo sapiens Mdm2 protein. 33 1.2
AF385327-1|AAL13247.1| 159|Homo sapiens MDM2 variant FB55 protein. 33 1.2
BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 1.6
AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein... 32 1.6
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 32 2.2
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 32 2.2
BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 2.9
BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 2.9
BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein. 31 2.9
AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein. 31 2.9
AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 2.9
AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonse... 31 2.9
AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein. 31 2.9
AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense t... 31 2.9
AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein. 31 2.9
EU076746-1|ABT17083.1| 118|Homo sapiens Mdm2 protein. 31 3.8
BC146794-1|AAI46795.1| 1919|Homo sapiens discs, large homolog 5 ... 31 3.8
AL450306-3|CAI17324.2| 1919|Homo sapiens discs, large homolog 5 ... 31 3.8
AL391421-2|CAI12104.2| 1919|Homo sapiens discs, large homolog 5 ... 31 3.8
AF352034-1|AAL83938.1| 1809|Homo sapiens DLG5 protein. 31 3.8
AF352033-1|AAL83937.1| 1809|Homo sapiens DLG5 protein. 31 3.8
AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator... 31 3.8
AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-... 31 3.8
AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-... 31 3.8
AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-... 31 3.8
AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein. 31 3.8
AB091676-1|BAC65420.1| 1764|Homo sapiens discs large protein lp-... 31 3.8
AB011155-1|BAA25509.2| 1952|Homo sapiens KIAA0583 protein protein. 31 3.8
M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle... 31 5.0
BC033726-1|AAH33726.1| 544|Homo sapiens coiled-coil domain cont... 30 6.6
AY368076-1|AAR04774.1| 1674|Homo sapiens kinesin family member 2... 30 6.6
AF245436-1|AAG44484.1| 544|Homo sapiens HT025 protein. 30 6.6
U95740-2|AAC31663.1| 358|Homo sapiens Unknown gene product prot... 30 8.8
CR407620-1|CAG28548.1| 269|Homo sapiens STX12 protein. 30 8.8
BC125224-1|AAI25225.1| 748|Homo sapiens LRCH2 protein protein. 30 8.8
BC107761-1|AAI07762.1| 372|Homo sapiens USP34 protein protein. 30 8.8
BC062325-1|AAH62325.1| 424|Homo sapiens USP34 protein protein. 30 8.8
BC046999-1|AAH46999.1| 276|Homo sapiens syntaxin 12 protein. 30 8.8
BC022783-1|AAH22783.1| 986|Homo sapiens USP34 protein protein. 30 8.8
AL035306-1|CAA22911.1| 269|Homo sapiens hypothetical protein pr... 30 8.8
AL020997-9|CAI20575.1| 276|Homo sapiens syntaxin 12 protein. 30 8.8
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 30 8.8
AF224469-1|AAF82247.1| 225|Homo sapiens junctin isoform 1 protein. 30 8.8
AF224468-1|AAF82246.1| 210|Homo sapiens junctin protein. 30 8.8
AF184241-1|AAG16983.1| 225|Homo sapiens cardiac junctin protein. 30 8.8
AF123769-1|AAP97248.1| 276|Homo sapiens syntaxin protein. 30 8.8
AB040928-1|BAA96019.1| 502|Homo sapiens KIAA1495 protein protein. 30 8.8
AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein. 30 8.8
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 30 8.8
>BC006460-1|AAH06460.1| 359|Homo sapiens hexamethylene
bis-acetamide inducible 1 protein.
Length = 359
Score = 57.6 bits (133), Expect = 4e-08
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Frame = +2
Query: 191 APFNNNQFLMEIH-KPEPENAFNILQTPSARTRDSSFSVD------SDDNYFYALPEDEE 349
AP+N QFLM+ H + EP+ + +A D + D +D + D
Sbjct: 201 APYNTTQFLMDDHDQEEPDLKTGLYSKRAAAKSDDTSDDDFMEEGGEEDGGSDGMGGDGS 260
Query: 350 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNS 529
E+L ++FS YE E L NM+K ELI+EYL LE + R +++ D++
Sbjct: 261 EFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLESKRLGGDDA 320
Query: 530 TDRDASI 550
R+ +
Sbjct: 321 RVRELEL 327
>AB021179-1|BAA36166.1| 359|Homo sapiens HEXIM1 protein protein.
Length = 359
Score = 57.6 bits (133), Expect = 4e-08
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Frame = +2
Query: 191 APFNNNQFLMEIH-KPEPENAFNILQTPSARTRDSSFSVD------SDDNYFYALPEDEE 349
AP+N QFLM+ H + EP+ + +A D + D +D + D
Sbjct: 201 APYNTTQFLMDDHDQEEPDLKTGLYSKRAAAKSDDTSDDDFMEEGGEEDGGSDGMGGDGS 260
Query: 350 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNS 529
E+L ++FS YE E L NM+K ELI+EYL LE + R +++ D++
Sbjct: 261 EFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLESKRLGGDDA 320
Query: 530 TDRDASI 550
R+ +
Sbjct: 321 RVRELEL 327
>BC025970-1|AAH25970.1| 286|Homo sapiens HEXIM2 protein protein.
Length = 286
Score = 48.0 bits (109), Expect = 3e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +2
Query: 191 APFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 370
AP+N QFLM PE N L P + S S +S+ E+ K+F
Sbjct: 139 APYNTTQFLMNDRDPEEPN----LDVPHGISHPGS-SGESEAGDSDGRGRAHGEFQRKDF 193
Query: 371 SSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 490
S YE E L +K EL+++YL LE + + T R
Sbjct: 194 SETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>BC012474-1|AAH12474.1| 286|Homo sapiens hexamthylene bis-acetamide
inducible 2 protein.
Length = 286
Score = 48.0 bits (109), Expect = 3e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +2
Query: 191 APFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 370
AP+N QFLM PE N L P + S S +S+ E+ K+F
Sbjct: 139 APYNTTQFLMNDRDPEEPN----LDVPHGISHPGS-SGESEAGDSDGRGRAHGEFQRKDF 193
Query: 371 SSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 490
S YE E L +K EL+++YL LE + + T R
Sbjct: 194 SETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>BC003531-1|AAH03531.1| 286|Homo sapiens HEXIM2 protein protein.
Length = 286
Score = 48.0 bits (109), Expect = 3e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +2
Query: 191 APFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 370
AP+N QFLM PE N L P + S S +S+ E+ K+F
Sbjct: 139 APYNTTQFLMNDRDPEEPN----LDVPHGISHPGS-SGESEAGDSDGRGRAHGEFQRKDF 193
Query: 371 SSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 490
S YE E L +K EL+++YL LE + + T R
Sbjct: 194 SETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>AY598322-1|AAT06733.1| 286|Homo sapiens L3 protein.
Length = 286
Score = 48.0 bits (109), Expect = 3e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +2
Query: 191 APFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 370
AP+N QFLM PE N L P + S S +S+ E+ K+F
Sbjct: 139 APYNTTQFLMNDRDPEEPN----LDVPHGISHPGS-SGESEAGDSDGRGRAHGEFQRKDF 193
Query: 371 SSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 490
S YE E L +K EL+++YL LE + + T R
Sbjct: 194 SETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>AK056946-1|BAB71319.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ32384 fis, clone SKMUS1000104, weakly similar to
Homo sapiens mRNA for HEXIM1 protein, complete cds. ).
Length = 286
Score = 48.0 bits (109), Expect = 3e-05
Identities = 32/100 (32%), Positives = 44/100 (44%)
Frame = +2
Query: 191 APFNNNQFLMEIHKPEPENAFNILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEF 370
AP+N QFLM PE N L P + S S +S+ E+ K+F
Sbjct: 139 APYNTTQFLMNDRDPEEPN----LDVPHGISHPGS-SGESEAGDSDGRGRAHGEFQRKDF 193
Query: 371 SSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 490
S YE E L +K EL+++YL LE + + T R
Sbjct: 194 SETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation factor
3 large subunit protein.
Length = 1382
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 806 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 865
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 866 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 924
Query: 662 ED 667
++
Sbjct: 925 DE 926
>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
Length = 1382
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 806 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 865
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 866 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 924
Query: 662 ED 667
++
Sbjct: 925 DE 926
>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
Length = 1388
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 812 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 871
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 872 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 930
Query: 662 ED 667
++
Sbjct: 931 DE 932
>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit A protein.
Length = 1382
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 806 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 865
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 866 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 924
Query: 662 ED 667
++
Sbjct: 925 DE 926
>BC014625-1|AAH14625.1| 401|Homo sapiens EIF3S10 protein protein.
Length = 401
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 28 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 87
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 88 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 146
Query: 662 ED 667
++
Sbjct: 147 DE 148
>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit 10 theta, 150/170kDa
protein.
Length = 1382
Score = 38.7 bits (86), Expect = 0.019
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Frame = +2
Query: 326 YALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKR 505
Y ++EEE E + E + ER + E ++EY K E + ++ + +++
Sbjct: 806 YYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEI 865
Query: 506 MEEDKDNSTDR---DASIADKDSMVTDRDTSET-----SVETFTAEDPPSNEIWQRLKDQ 661
E ++ +R D+S++ KDS DRD+ T ++ PP E W+R + +
Sbjct: 866 EERERRREEERRLGDSSLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKE-WRRGEGR 924
Query: 662 ED 667
++
Sbjct: 925 DE 926
>AK002004-1|BAA92030.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ11142 fis, clone PLACE1006552. ).
Length = 401
Score = 37.5 bits (83), Expect = 0.044
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 470 LVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSN 634
L KR +R K K +E D D + + S ++ S+ +D D SE+ E F P+N
Sbjct: 92 LKKRIKRVKKKEVEGDADEDEESEESSEEESSLESDEDESESEDEVFDDSICPTN 146
>BC018941-1|AAH18941.1| 137|Homo sapiens transmembrane protein 113
protein.
Length = 137
Score = 34.7 bits (76), Expect = 0.31
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 593 SQMYLCQSPYYLYLQSTHLCQCYCLYLPPFVSSSSAQS 480
S +Y Y TH+C C C+YL VS SSA++
Sbjct: 52 STVYAPSFKYICVHTDTHICVCVCIYLSSVVSKSSAEA 89
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 34.7 bits (76), Expect = 0.31
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Frame = +2
Query: 254 NILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELI 433
+ILQ ++ FS DDN A+ L K SV EDA E+ M E+I
Sbjct: 294 DILQVGLRELLNALFSNPMDDNLICAVK------LLKLTGSVLEDAWKEK-GKMDMEEII 346
Query: 434 Q--EYLLLEAKFENLVKRTERSKMKRMEED----KDNSTDRDASIADKDSMVTDRDTSET 595
Q E ++L+A VK+ ++ + ST R+A+ + + + T T
Sbjct: 347 QRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYT 406
Query: 596 SVET-FTAEDPPSNEIWQRLKDQED 667
S FTA DP E +Q L ++ED
Sbjct: 407 SDGVPFTAADPDYQEKYQELLERED 431
>BC011760-1|AAH11760.1| 137|Homo sapiens transmembrane protein 113
protein.
Length = 137
Score = 34.7 bits (76), Expect = 0.31
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 593 SQMYLCQSPYYLYLQSTHLCQCYCLYLPPFVSSSSAQS 480
S +Y Y TH+C C C+YL VS SSA++
Sbjct: 52 STVYAPSFKYICVHTDTHICVCVCIYLSSVVSKSSAEA 89
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 34.7 bits (76), Expect = 0.31
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Frame = +2
Query: 254 NILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELI 433
+ILQ ++ FS DDN A+ L K SV EDA E+ M E+I
Sbjct: 215 DILQVGLRELLNALFSNPMDDNLICAVK------LLKLTGSVLEDAWKEK-GKMDMEEII 267
Query: 434 Q--EYLLLEAKFENLVKRTERSKMKRMEED----KDNSTDRDASIADKDSMVTDRDTSET 595
Q E ++L+A VK+ ++ + ST R+A+ + + + T T
Sbjct: 268 QRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYT 327
Query: 596 SVET-FTAEDPPSNEIWQRLKDQED 667
S FTA DP E +Q L ++ED
Sbjct: 328 SDGVPFTAADPDYQEKYQELLERED 352
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 34.7 bits (76), Expect = 0.31
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Frame = +2
Query: 254 NILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELI 433
+ILQ ++ FS DDN A+ L K SV EDA E+ M E+I
Sbjct: 294 DILQVGLRELLNALFSNPMDDNLICAVK------LLKLTGSVLEDAWKEK-GKMDMEEII 346
Query: 434 Q--EYLLLEAKFENLVKRTERSKMKRMEED----KDNSTDRDASIADKDSMVTDRDTSET 595
Q E ++L+A VK+ ++ + ST R+A+ + + + T T
Sbjct: 347 QRIENVVLDANCSRDVKQMLLKLVELRSSNWGRVHATSTYREATPENDPNYFMNEPTFYT 406
Query: 596 SVET-FTAEDPPSNEIWQRLKDQED 667
S FTA DP E +Q L ++ED
Sbjct: 407 SDGVPFTAADPDYQEKYQELLERED 431
>D86977-1|BAA13213.2| 1256|Homo sapiens KIAA0224 protein.
Length = 1256
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKDNSTDRDASIADK--DSMVTDRDTSETSVETFTAEDPPSNEIWQR 649
K+++ S K EE KD+ D + D+ ++ DR VET + S E W+R
Sbjct: 101 KKSKVSSYKDWEESKDDQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWER 160
Query: 650 LKDQEDQIRE 679
+ +E + RE
Sbjct: 161 SRQRERERRE 170
>BC008340-1|AAH08340.1| 1227|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 38 protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKDNSTDRDASIADK--DSMVTDRDTSETSVETFTAEDPPSNEIWQR 649
K+++ S K EE KD+ D + D+ ++ DR VET + S E W+R
Sbjct: 72 KKSKVSSYKDWEESKDDQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWER 131
Query: 650 LKDQEDQIRE 679
+ +E + RE
Sbjct: 132 SRQRERERRE 141
>BC004235-1|AAH04235.1| 1227|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 38 protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKDNSTDRDASIADK--DSMVTDRDTSETSVETFTAEDPPSNEIWQR 649
K+++ S K EE KD+ D + D+ ++ DR VET + S E W+R
Sbjct: 72 KKSKVSSYKDWEESKDDQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWER 131
Query: 650 LKDQEDQIRE 679
+ +E + RE
Sbjct: 132 SRQRERERRE 141
>AF038391-1|AAC39729.1| 1227|Homo sapiens pre-mRNA splicing factor
protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKDNSTDRDASIADK--DSMVTDRDTSETSVETFTAEDPPSNEIWQR 649
K+++ S K EE KD+ D + D+ ++ DR VET + S E W+R
Sbjct: 72 KKSKVSSYKDWEESKDDQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWER 131
Query: 650 LKDQEDQIRE 679
+ +E + RE
Sbjct: 132 SRQRERERRE 141
>AC004682-1|AAC27431.1| 1227|Homo sapiens pre-mRNA splicing factor
(PRP16)(KIAA0224) protein.
Length = 1227
Score = 34.3 bits (75), Expect = 0.41
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKDNSTDRDASIADK--DSMVTDRDTSETSVETFTAEDPPSNEIWQR 649
K+++ S K EE KD+ D + D+ ++ DR VET + S E W+R
Sbjct: 72 KKSKVSSYKDWEESKDDQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWER 131
Query: 650 LKDQEDQIRE 679
+ +E + RE
Sbjct: 132 SRQRERERRE 141
>AB111886-1|BAC98374.1| 1571|Homo sapiens KIAA2034 protein protein.
Length = 1571
Score = 34.3 bits (75), Expect = 0.41
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Frame = +2
Query: 329 ALPEDEEEYLTKEFSS-VYEDAQCERLSNMTKNELIQEYLLLEAKFE---------NLVK 478
A + E E + E + V E+ +C R K L Q LEA E L K
Sbjct: 507 AARKQELELVVSELEARVGEEEECSRQMQTEKKRLQQHIQELEAHLEAEEGARQKLQLEK 566
Query: 479 RTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLK- 655
T +KMK+ EED D+++ ++ + ++ DR +E S + E+ + RLK
Sbjct: 567 VTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDR-LAEFSSQAAEEEEKVKSLNKLRLKY 625
Query: 656 -----DQEDQIRE 679
D ED++R+
Sbjct: 626 EATIADMEDRLRK 638
>BC127816-1|AAI27817.1| 416|Homo sapiens Unknown (protein for
IMAGE:40131779) protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.54
Identities = 23/112 (20%), Positives = 53/112 (47%)
Frame = +2
Query: 344 EEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD 523
E ++L KE SV Q + N N L Q+ + E ++ E ++++E ++
Sbjct: 223 EADHLGKELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWE----EKIQEQEE 278
Query: 524 NSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIRE 679
+++ I +++ M+ +++ E E +++++QE++IRE
Sbjct: 279 KIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIRE 330
>U33201-1|AAA75516.1| 321|Homo sapiens mdm2-C protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 506 MEEDKDNS-TDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
M+ED D ++ D+DS V+D+ + E VE+ +ED +E Q L D++D++ ++
Sbjct: 50 MKEDLDAGVSEHSGDWLDQDS-VSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQV 108
>EU076748-1|ABT17085.1| 144|Homo sapiens Mdm2 protein.
Length = 144
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 506 MEEDKDNS-TDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
M+ED D ++ D+DS V+D+ + E VE+ +ED +E Q L D++D++ ++
Sbjct: 50 MKEDLDAGVSEHSGDWLDQDS-VSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQV 108
>AF385327-1|AAL13247.1| 159|Homo sapiens MDM2 variant FB55 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 506 MEEDKDNS-TDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
M+ED D ++ D+DS V+D+ + E VE+ +ED +E Q L D++D++ ++
Sbjct: 50 MKEDLDAGVSEHSGDWLDQDS-VSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQV 108
>BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23 protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKD-NSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRL 652
+R R K + ++++D N DRD DKD D+D +S+ +D S +
Sbjct: 69 ERERRHKERERDKERDRNKKDRDR---DKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK 125
Query: 653 KDQEDQ 670
KD+ED+
Sbjct: 126 KDEEDE 131
>AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein
protein.
Length = 820
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 476 KRTERSKMKRMEEDKD-NSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRL 652
+R R K + ++++D N DRD DKD D+D +S+ +D S +
Sbjct: 69 ERERRHKERERDKERDRNKKDRDR---DKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK 125
Query: 653 KDQEDQ 670
KD+ED+
Sbjct: 126 KDEEDE 131
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 31.9 bits (69), Expect = 2.2
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 338 EDEEEYLTKEFSSVYEDAQCERL--SNMTKNELIQEYLLLEAKFENLVKRTERSKMKRME 511
ED++ +TKE D Q E+L S + N+L LE K ENLV + +S+ +
Sbjct: 547 EDDKMDITKEL-----DVQKEKLIQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVS 601
Query: 512 EDKDNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
K+N ++ +++ + R+ S+ +D SN LK++E ++R L
Sbjct: 602 IQKENLELKEHIRQNEEELSRIRNELMQSLN----QDSNSNFKDTLLKEREAEVRNL 654
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 31.9 bits (69), Expect = 2.2
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 338 EDEEEYLTKEFSSVYEDAQCERL--SNMTKNELIQEYLLLEAKFENLVKRTERSKMKRME 511
ED++ +TKE D Q E+L S + N+L LE K ENLV + +S+ +
Sbjct: 262 EDDKMDITKEL-----DVQKEKLIQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVS 316
Query: 512 EDKDNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
K+N ++ +++ + R+ S+ +D SN LK++E ++R L
Sbjct: 317 IQKENLELKEHIRQNEEELSRIRNELMQSLN----QDSNSNFKDTLLKEREAEVRNL 369
>BC115737-1|AAI15738.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>BC114964-1|AAI14965.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>BC090919-1|AAH90919.1| 109|Homo sapiens UPF2 protein protein.
Length = 109
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AY013249-1|AAG48509.1| 1272|Homo sapiens hUPF2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AL645617-1|CAI16755.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AL138898-4|CAH73458.1| 1272|Homo sapiens UPF2 regulator of nonsense
transcripts homolog (yeast) protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AF318574-1|AAG60689.1| 1272|Homo sapiens UPF2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AF301013-1|AAG33225.1| 1272|Homo sapiens regulator of nonsense
transcripts 2 protein.
Length = 1272
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 21 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 78
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 79 KVKAEEESKKKEEE 92
>AB037829-1|BAA92646.1| 1298|Homo sapiens KIAA1408 protein protein.
Length = 1298
Score = 31.5 bits (68), Expect = 2.9
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +2
Query: 383 EDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKD 562
++ C ++ E ++ + L AK E V + K KR+E+DK D++ D++
Sbjct: 47 KEKDCSERRTVSSKERPKDDIKLTAKKE--VSKAPEDKKKRLEDDKRKKEDKERKKKDEE 104
Query: 563 SMVTDRDTSETSVE 604
+ + ++ + E
Sbjct: 105 KVKAEEESKKKEEE 118
>EU076746-1|ABT17083.1| 118|Homo sapiens Mdm2 protein.
Length = 118
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 506 MEEDKDNS-TDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQ 670
M+ED D ++ D+DS V+D+ + E VE+ +ED +E Q L D++D+
Sbjct: 50 MKEDLDAGVSEHSGDWLDQDS-VSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDE 104
>BC146794-1|AAI46795.1| 1919|Homo sapiens discs, large homolog 5
(Drosophila) protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 398 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 457
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 458 SKLKSSTSEKKAANEEMEALRQIKDTV 484
>AL450306-3|CAI17324.2| 1919|Homo sapiens discs, large homolog 5
(Drosophila) protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 398 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 457
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 458 SKLKSSTSEKKAANEEMEALRQIKDTV 484
>AL391421-2|CAI12104.2| 1919|Homo sapiens discs, large homolog 5
(Drosophila) protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 398 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 457
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 458 SKLKSSTSEKKAANEEMEALRQIKDTV 484
>AF352034-1|AAL83938.1| 1809|Homo sapiens DLG5 protein.
Length = 1809
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 288 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 347
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 348 SKLKSSTSEKKAANEEMEALRQIKDTV 374
>AF352033-1|AAL83937.1| 1809|Homo sapiens DLG5 protein.
Length = 1809
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 288 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 347
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 348 SKLKSSTSEKKAANEEMEALRQIKDTV 374
>AF186379-1|AAD56250.1| 798|Homo sapiens ligand effect modulator-6
protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.8
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 ILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQ 436
++ PS + R S S +N PE E Y SSV ER + L
Sbjct: 323 VVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSKSSVLTGGHEERKTKRPSLRLFG 382
Query: 437 EY---LLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVET 607
++ + +K E L+ ++ + R E+KD S+D I S +D+ ++E
Sbjct: 383 DHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQGQIC--SSTDSDQCYLRETLEA 440
Query: 608 FTAEDPPSNEIWQRLKDQE 664
P S ++L+DQE
Sbjct: 441 SKQVSPCSTR--KQLQDQE 457
>AF159714-1|AAD51615.1| 798|Homo sapiens PPAR gamma coactivator-1
protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.8
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 ILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQ 436
++ PS + R S S +N PE E Y SSV ER + L
Sbjct: 323 VVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSKSSVLTGGHEERKTKRPSLRLFG 382
Query: 437 EY---LLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVET 607
++ + +K E L+ ++ + R E+KD S+D I S +D+ ++E
Sbjct: 383 DHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQGQIC--SSTDSDQCYLRETLEA 440
Query: 608 FTAEDPPSNEIWQRLKDQE 664
P S ++L+DQE
Sbjct: 441 SKQVSPCSTR--KQLQDQE 457
>AF108205-1|AAF19083.1| 798|Homo sapiens PPAR gamma coactivator-1
protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.8
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 ILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQ 436
++ PS + R S S +N PE E Y SSV ER + L
Sbjct: 323 VVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSKSSVLTGGHEERKTKRPSLRLFG 382
Query: 437 EY---LLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVET 607
++ + +K E L+ ++ + R E+KD S+D I S +D+ ++E
Sbjct: 383 DHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQGQIC--SSTDSDQCYLRETLEA 440
Query: 608 FTAEDPPSNEIWQRLKDQE 664
P S ++L+DQE
Sbjct: 441 SKQVSPCSTR--KQLQDQE 457
>AF106698-1|AAF18573.1| 798|Homo sapiens PPAR gamma coactivator-1
protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.8
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 ILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQ 436
++ PS + R S S +N PE E Y SSV ER + L
Sbjct: 323 VVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSKSSVLTGGHEERKTKRPSLRLFG 382
Query: 437 EY---LLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVET 607
++ + +K E L+ ++ + R E+KD S+D I S +D+ ++E
Sbjct: 383 DHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQGQIC--SSTDSDQCYLRETLEA 440
Query: 608 FTAEDPPSNEIWQRLKDQE 664
P S ++L+DQE
Sbjct: 441 SKQVSPCSTR--KQLQDQE 457
>AC092834-1|AAY41058.1| 798|Homo sapiens unknown protein.
Length = 798
Score = 31.1 bits (67), Expect = 3.8
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 ILQTPSARTRDSSFSVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQ 436
++ PS + R S S +N PE E Y SSV ER + L
Sbjct: 323 VVPPPSKKPRYSESSGTQGNNSTKKGPEQSELYAQLSKSSVLTGGHEERKTKRPSLRLFG 382
Query: 437 EY---LLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVET 607
++ + +K E L+ ++ + R E+KD S+D I S +D+ ++E
Sbjct: 383 DHDYCQSINSKTEILINISQELQDSRQLENKDVSSDWQGQIC--SSTDSDQCYLRETLEA 440
Query: 608 FTAEDPPSNEIWQRLKDQE 664
P S ++L+DQE
Sbjct: 441 SKQVSPCSTR--KQLQDQE 457
>AB091676-1|BAC65420.1| 1764|Homo sapiens discs large protein lp-dlg
protein.
Length = 1764
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 243 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 302
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 303 SKLKSSTSEKKAANEEMEALRQIKDTV 329
>AB011155-1|BAA25509.2| 1952|Homo sapiens KIAA0583 protein protein.
Length = 1952
Score = 31.1 bits (67), Expect = 3.8
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 425 ELIQEYLL-LEAKFENLVKRTERSKMKR---MEEDKDNSTDRDASIADKDSMVTDRDTSE 592
EL+Q L L K +E+ + +R E K ++RD I++ D + T+ + +E
Sbjct: 431 ELLQSELTELRTTQVKTAKESEKYREERDAVYSEYKLIMSERDQVISELDKLQTEVELAE 490
Query: 593 TSVETFTAEDPPSNEIWQRLKDQEDQI 673
+ +++ T+E +NE + L+ +D +
Sbjct: 491 SKLKSSTSEKKAANEEMEALRQIKDTV 517
>M31013-1|AAA36349.1| 1247|Homo sapiens protein ( Human nonmuscle
myosin heavy chain (NMHC) mRNA, 3' end. ).
Length = 1247
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 350 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFEN---LVKRTERSKMKRMEEDK 520
E +E Y+ Q E+ + ++E L E L K T +K+K++EE++
Sbjct: 207 EARVEEEEERYQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQ 266
Query: 521 DNSTDRDASIADKDSMVTDRDTSETSVETFTAEDPPSNEIWQRLKDQEDQIREL 682
D++ +A + ++ DR T+ T E+ S + + E I +L
Sbjct: 267 IILEDQNCKLAKEKKLLEDRIAEFTT--NLTEEEEKSKSLAKLKNKHEAMITDL 318
>BC033726-1|AAH33726.1| 544|Homo sapiens coiled-coil domain
containing 82 protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.6
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Frame = +2
Query: 299 SVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENL-V 475
++D D + ED + L K+ + ED Q + LS + Q ++E E +
Sbjct: 120 NIDLQDQEKHLSQEDND--LNKQTGQIIEDDQEKHLSQEDNDLNKQTGQIIEDDLEEEDI 177
Query: 476 KRTERSKMKRMEEDKDNSTDRDASI----ADKDSMVTDRDTSETSVETFTAED---PPSN 634
KR +R ++ + D D S D D + + V + + S +E T E
Sbjct: 178 KRGKRKRLSSVMCDSDESDDSDILVRKVGVKRPRRVVEDEGSSVEMEQKTPEKTLAAQKR 237
Query: 635 EIWQRLKDQEDQ 670
E Q+LK+ Q
Sbjct: 238 EKLQKLKELSKQ 249
>AY368076-1|AAR04774.1| 1674|Homo sapiens kinesin family member 21A
protein.
Length = 1674
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 437 EYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADKDSMVTDRDTSETSVETFTA 616
E + L K +KR E+ K KR+++ ++++ + + +D+ TD++ E +
Sbjct: 536 EIIDLAKKDLEKLKRKEKRKKKRLQKLEESNREERSVAGKEDNTDTDQEKKEEKGVSERE 595
Query: 617 EDPPSNEIWQRLKDQEDQIRE 679
+ E Q + D ED+ E
Sbjct: 596 NNELEVEESQEVSDHEDEEEE 616
>AF245436-1|AAG44484.1| 544|Homo sapiens HT025 protein.
Length = 544
Score = 30.3 bits (65), Expect = 6.6
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Frame = +2
Query: 299 SVDSDDNYFYALPEDEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENL-V 475
++D D + ED + L K+ + ED Q + LS + Q ++E E +
Sbjct: 120 NIDLQDQEKHLSQEDND--LNKQTGQIIEDDQEKHLSQEDNDLNKQTGQIIEDDLEEEDI 177
Query: 476 KRTERSKMKRMEEDKDNSTDRDASI----ADKDSMVTDRDTSETSVETFTAED---PPSN 634
KR +R ++ + D D S D D + + V + + S +E T E
Sbjct: 178 KRGKRKRLSSVMCDSDESDDSDILVRKVGVKRPRRVVEDEGSSVEMEQKTPEKTLAAQKR 237
Query: 635 EIWQRLKDQEDQ 670
E Q+LK+ Q
Sbjct: 238 EKLQKLKELSKQ 249
>U95740-2|AAC31663.1| 358|Homo sapiens Unknown gene product
protein.
Length = 358
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +2
Query: 380 YEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDKDNSTDRDASIADK 559
+ + + +L ++ELIQ+ L K + LV E +++ EEDK+ + +
Sbjct: 254 FPEKEKTKLQKQREDELIQKIHKLVQKRDFLVDDAEVERLREQEEDKEMADFLRIKLKPL 313
Query: 560 DSMVTDRDTSETSVETFTAEDPPS 631
D + +S + AE PPS
Sbjct: 314 DKVTKSPASSRAEKK---AEPPPS 334
>CR407620-1|CAG28548.1| 269|Homo sapiens STX12 protein.
Length = 269
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 422 NELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD------NSTDRDASIADKDSMVTDRD 583
NEL++E L +R +R + +R+ D + R S +K+S+ R
Sbjct: 71 NELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIARARA 130
Query: 584 TSETSVETFTAEDP----PSNEIWQRLKDQEDQI 673
S S E E+ S+E W +++ QED++
Sbjct: 131 GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEV 164
>BC125224-1|AAI25225.1| 748|Homo sapiens LRCH2 protein protein.
Length = 748
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 419 KNELIQEYLLLEAKFENLVKRTERSKMKRM---EEDKDNSTDRDASIADKDSMVTDRDTS 589
+ L +E LL E + ++L + T+ K+ +E K+ + S+ T
Sbjct: 450 EKRLEKEQLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVE--C 507
Query: 590 ETSVETFTAEDPPSNEIWQRLKDQEDQIRE 679
E SV P S WQ L++Q+DQI E
Sbjct: 508 EKSVSADEVNSPLSPLTWQPLENQKDQIDE 537
>BC107761-1|AAI07762.1| 372|Homo sapiens USP34 protein protein.
Length = 372
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 66 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 112
>BC062325-1|AAH62325.1| 424|Homo sapiens USP34 protein protein.
Length = 424
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 118 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 164
>BC046999-1|AAH46999.1| 276|Homo sapiens syntaxin 12 protein.
Length = 276
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 422 NELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD------NSTDRDASIADKDSMVTDRD 583
NEL++E L +R +R + +R+ D + R S +K+S+ R
Sbjct: 78 NELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIARARA 137
Query: 584 TSETSVETFTAEDP----PSNEIWQRLKDQEDQI 673
S S E E+ S+E W +++ QED++
Sbjct: 138 GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEV 171
>BC022783-1|AAH22783.1| 986|Homo sapiens USP34 protein protein.
Length = 986
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 680 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 726
>AL035306-1|CAA22911.1| 269|Homo sapiens hypothetical protein
protein.
Length = 269
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 422 NELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD------NSTDRDASIADKDSMVTDRD 583
NEL++E L +R +R + +R+ D + R S +K+S+ R
Sbjct: 71 NELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIARARA 130
Query: 584 TSETSVETFTAEDP----PSNEIWQRLKDQEDQI 673
S S E E+ S+E W +++ QED++
Sbjct: 131 GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEV 164
>AL020997-9|CAI20575.1| 276|Homo sapiens syntaxin 12 protein.
Length = 276
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 422 NELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD------NSTDRDASIADKDSMVTDRD 583
NEL++E L +R +R + +R+ D + R S +K+S+ R
Sbjct: 78 NELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIARARA 137
Query: 584 TSETSVETFTAEDP----PSNEIWQRLKDQEDQI 673
S S E E+ S+E W +++ QED++
Sbjct: 138 GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEV 171
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 3089 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 3135
>AF224469-1|AAF82247.1| 225|Homo sapiens junctin isoform 1 protein.
Length = 225
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +2
Query: 341 DEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDK 520
D+ + L + S V + ++ +TK EL +E E++ E+ K ER K K+ + K
Sbjct: 87 DDAKVLLEGPSGVAKRKTKAKVKELTKEELKKEKEKPESRKES--KNEERKKGKKEDVRK 144
Query: 521 DNSTDRDASIADKDSMVTDRDTSETSVE 604
D DA ++ K+S +D + V+
Sbjct: 145 DKKI-ADADLSRKESPKGKKDREKEKVD 171
>AF224468-1|AAF82246.1| 210|Homo sapiens junctin protein.
Length = 210
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +2
Query: 341 DEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDK 520
D+ + L + S V + ++ +TK EL +E E++ E+ K ER K K+ + K
Sbjct: 72 DDAKVLLEGPSGVAKRKTKAKVKELTKEELKKEKEKPESRKES--KNEERKKGKKEDVRK 129
Query: 521 DNSTDRDASIADKDSMVTDRDTSETSVE 604
D DA ++ K+S +D + V+
Sbjct: 130 DKKI-ADADLSRKESPKGKKDREKEKVD 156
>AF184241-1|AAG16983.1| 225|Homo sapiens cardiac junctin protein.
Length = 225
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = +2
Query: 341 DEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMKRMEEDK 520
D+ + L + S V + ++ +TK EL +E E++ E+ K ER K K+ + K
Sbjct: 87 DDAKVLLEGPSGVAKRKTKAKVKELTKEELKKEKEKPESRKES--KNEERKKGKKEDVRK 144
Query: 521 DNSTDRDASIADKDSMVTDRDTSETSVE 604
D DA ++ K+S +D + V+
Sbjct: 145 DKKI-ADADLSRKESPKGKKDREKEKVD 171
>AF123769-1|AAP97248.1| 276|Homo sapiens syntaxin protein.
Length = 276
Score = 29.9 bits (64), Expect = 8.8
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 422 NELIQEYLLLEAKFENLVKRTERSKMKRMEEDKD------NSTDRDASIADKDSMVTDRD 583
NEL++E L +R +R + +R+ D + R S +K+S+ R
Sbjct: 78 NELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKESIARARA 137
Query: 584 TSETSVETFTAEDP----PSNEIWQRLKDQEDQI 673
S S E E+ S+E W +++ QED++
Sbjct: 138 GSRLSAEERQREEQLVSFDSHEEWNQMQSQEDEV 171
>AB040928-1|BAA96019.1| 502|Homo sapiens KIAA1495 protein protein.
Length = 502
Score = 29.9 bits (64), Expect = 8.8
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 419 KNELIQEYLLLEAKFENLVKRTERSKMKRM---EEDKDNSTDRDASIADKDSMVTDRDTS 589
+ L +E LL E + ++L + T+ K+ +E K+ + S+ T
Sbjct: 187 EKRLEKEQLLAEEEDDDLKEVTDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVE--C 244
Query: 590 ETSVETFTAEDPPSNEIWQRLKDQEDQIRE 679
E SV P S WQ L++Q+DQI E
Sbjct: 245 EKSVSADEVNSPLSPLTWQPLENQKDQIDE 274
>AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein.
Length = 1196
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 890 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 936
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 353 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 493
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 3106 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 3152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,942,944
Number of Sequences: 237096
Number of extensions: 1407227
Number of successful extensions: 5333
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 4795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5268
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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