Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0118
(715 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 111 3e-26
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 95 1e-21
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 95 2e-21
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 95 2e-21
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 95 2e-21
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 95 2e-21
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 94 3e-21
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 94 3e-21
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 94 4e-21
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 94 4e-21
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 94 4e-21
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 93 6e-21
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 93 6e-21
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 93 8e-21
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.58
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 2.4
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 2.4
AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein. 24 5.4
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 24 5.4
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 7.2
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 9.5
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 23 9.5
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 111 bits (266), Expect = 3e-26
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +2
Query: 302 SLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVHKEPLAHVAKVA 481
+LTGDSK+Q E+RDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVV +EPLA AK
Sbjct: 32 ALTGDSKSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRREPLA--AKTI 89
Query: 482 KIAAPL 499
AAP+
Sbjct: 90 VAAAPV 95
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 95.5 bits (227), Expect = 1e-21
Identities = 54/128 (42%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV EP A +A+ V K+ A + YSAPI HH
Sbjct: 137 NAVVRPEPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 196
Query: 608 LVTSQSKP 631
+T + P
Sbjct: 197 PITHYAAP 204
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 95.1 bits (226), Expect = 2e-21
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + YSAPI HH
Sbjct: 137 NAVVRREPSAVKIAQPVHKVIAQNVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 196
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 197 PIAHYAAP 204
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 95.1 bits (226), Expect = 2e-21
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 85 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 144
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + YSAPI HH
Sbjct: 145 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 204
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 205 PIAHYAAP 212
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 95.1 bits (226), Expect = 2e-21
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 109 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 168
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + YSAPI HH
Sbjct: 169 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 228
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 229 PIAHYAAP 236
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 95.1 bits (226), Expect = 2e-21
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + YSAPI HH
Sbjct: 137 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 196
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 197 PIAHYAAP 204
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 94.3 bits (224), Expect = 3e-21
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 85 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 144
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + Y+API HH
Sbjct: 145 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAA 204
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 205 PIAHHAAP 212
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 94.3 bits (224), Expect = 3e-21
Identities = 53/128 (41%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG R VDY AD H GF
Sbjct: 85 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHHRIVDYHADHHTGF 144
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + YSAPI HH
Sbjct: 145 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 204
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 205 PIAHYAAP 212
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 93.9 bits (223), Expect = 4e-21
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + Y+API HH
Sbjct: 137 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAA 196
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 197 PIAHYAAP 204
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 93.9 bits (223), Expect = 4e-21
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + Y+API HH
Sbjct: 137 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAA 196
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 197 PIAHYAAP 204
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 93.9 bits (223), Expect = 4e-21
Identities = 52/128 (40%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A + Y+API HH
Sbjct: 137 NAVVRREPSAVKIAQPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAA 196
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 197 PIAHYAAP 204
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 93.5 bits (222), Expect = 6e-21
Identities = 51/126 (40%), Positives = 63/126 (50%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 77 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 136
Query: 434 NAVVHKEPLAHVAKVAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*CLV 613
NAVV +EP A K+A+ + YSAPI HH +
Sbjct: 137 NAVVRREPSA--VKIAQPVHKVIAQPVHVHAPVAHATVQHHHAAPIAHYSAPIAHHAAPI 194
Query: 614 TSQSKP 631
+ P
Sbjct: 195 AHYAAP 200
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 93.5 bits (222), Expect = 6e-21
Identities = 52/128 (40%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 85 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 144
Query: 434 NAVVHKEPLA-HVA-KVAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A V K+ A + Y+API HH
Sbjct: 145 NAVVRREPSAVKIAHPVHKVIAQPVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAA 204
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 205 PIAHHAAP 212
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 93.1 bits (221), Expect = 8e-21
Identities = 53/128 (41%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 254 EYDAHPQYSFAYDVQDSLTGDSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 433
E+ A Y F+Y V D TGD K+QHETR GD V G YS++D DG +R VDY AD H GF
Sbjct: 85 EHHAPANYEFSYSVHDEHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVDYHADHHTGF 144
Query: 434 NAVVHKEPLA-HVAK-VAKIAAPLTYXXXXXXXXXXXXXXXXXXXXXXXXYSAPIYHH*C 607
NAVV +EP A +A+ V K+ A YSAPI HH
Sbjct: 145 NAVVRREPSAVKIAQPVHKVIAQPVDVSSYAHAPVAHATVQHHHAAPIAHYSAPIAHHAA 204
Query: 608 LVTSQSKP 631
+ + P
Sbjct: 205 PIAHYAAP 212
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.1 bits (57), Expect = 0.58
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 173 EQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQRA*RPLLQR 27
+Q E++VP QL + +Q R P++Q +Q Q ++ G+R P L++
Sbjct: 259 QQGERYVP-PQLRQQRQQQQR--PRQQQQQQQQQQQQQGERYVPPQLRQ 304
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 173 EQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 51
+Q E++VP + R +Q + Q++ ++ Q +RP Q+
Sbjct: 446 QQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQ 486
Score = 24.2 bits (50), Expect = 4.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 173 EQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 51
+Q E++VP QL + +Q Q+Q ++ Q +R QR
Sbjct: 292 QQGERYVP-PQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQR 331
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 88 CSNSRKCADQDSELEGHC 35
C N R CAD E HC
Sbjct: 904 CDNVRDCADGSDESPDHC 921
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 88 CSNSRKCADQDSELEGHC 35
C N R CAD E HC
Sbjct: 904 CDNVRDCADGSDESPDHC 921
>AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein.
Length = 115
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 55 CPGLRICDCSSRLCSC 102
CPG C S RL SC
Sbjct: 81 CPGTEPCQSSDRLGSC 96
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.8 bits (49), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Frame = -1
Query: 130 DWSRMCGVC----RRNKACSNSRKCAD 62
D S +C C + +AC+NS KC D
Sbjct: 294 DRSNLCWKCGLSGHKKQACTNSVKCLD 320
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.4 bits (48), Expect = 7.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 173 EQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 51
+Q +QH REQ + +Q Q+Q +Q Q +R QR
Sbjct: 224 QQQQQHQQREQQQQQQQQ------QQQQQQQQQQQQRNQQR 258
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 173 EQPEQHVPREQLHMRLEQDVRCMPQEQSLLEQSQMRRPGQR 51
+Q +QH REQ + Q Q Q +Q Q ++ Q+
Sbjct: 264 QQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQ 304
Score = 23.0 bits (47), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 176 DEQPEQHVPRE-QLHMRLEQDVRCMPQEQSLLEQSQM 69
++Q +Q V ++ Q H R +Q + Q+Q EQ ++
Sbjct: 273 EQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQEL 309
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 347 DVVQGSYSVVDPDGTKRTVDY 409
+V+ GS+ DP G +RT Y
Sbjct: 86 NVMMGSWRAYDPTGFQRTSPY 106
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 204 PPHSPKLPLSPRSLKSR 254
PP S +LP SPR+ + R
Sbjct: 1110 PPRSRRLPPSPRTTEMR 1126
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,781
Number of Sequences: 2352
Number of extensions: 7969
Number of successful extensions: 56
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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