Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0118
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substr...    32   2.3  
AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substr...    32   2.3  
AK027605-1|BAB55227.1|  564|Homo sapiens protein ( Homo sapiens ...    31   5.4  
BC111735-1|AAI11736.1| 1024|Homo sapiens HDAC9 protein protein.        30   9.5  
AY197371-1|AAO27363.1| 1069|Homo sapiens histone deacetylase 9 p...    30   9.5  
AK097178-1|BAC04971.1|  768|Homo sapiens protein ( Homo sapiens ...    30   9.5  

>AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substrate
           4 protein.
          Length = 1257

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 577 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 458
           GHGSG    SG   G G  KG+ G G+RG      S  G+
Sbjct: 579 GHGSGGGKNSGGGKGSGSGKGSDGDGERGKSLKKRSYFGK 618


>AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substrate
           4 protein.
          Length = 1257

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 577 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 458
           GHGSG    SG   G G  KG+ G G+RG      S  G+
Sbjct: 579 GHGSGGGKNSGGGKGSGSGKGSDGDGERGKSLKKRSYFGK 618


>AK027605-1|BAB55227.1|  564|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14699 fis, clone NT2RP2006571, moderately
           similar to CYTOCHROME P450 2G1 (EC 1.14.14.1). ).
          Length = 564

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 574 HGSGMHNRSGVHNGRGVHKGTCGV 503
           H + MHNR+ +HN +G HK T G+
Sbjct: 527 HAAKMHNRTPIHNYKG-HKATAGL 549


>BC111735-1|AAI11736.1| 1024|Homo sapiens HDAC9 protein protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 161 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 72
           QH  + Q H++L+Q++  + Q+Q LLE+ Q
Sbjct: 77  QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 106


>AY197371-1|AAO27363.1| 1069|Homo sapiens histone deacetylase 9
           protein.
          Length = 1069

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 161 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 72
           QH  + Q H++L+Q++  + Q+Q LLE+ Q
Sbjct: 78  QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 107


>AK097178-1|BAC04971.1|  768|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39859 fis, clone SPLEN2015094, moderately
           similar to Mus musculus histone deacetylase mHDA1 mRNA.
           ).
          Length = 768

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 161 QHVPREQLHMRLEQDVRCMPQEQSLLEQSQ 72
           QH  + Q H++L+Q++  + Q+Q LLE+ Q
Sbjct: 97  QHQAQLQEHIKLQQELLAIKQQQELLEKEQ 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,545,694
Number of Sequences: 237096
Number of extensions: 1153292
Number of successful extensions: 3982
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)