Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0111
(716 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 125 2e-30
Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein. 31 0.047
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 31 0.047
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 28 0.33
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.3
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 26 1.3
AJ237664-1|CAB40379.2| 81|Anopheles gambiae putative infection... 25 2.3
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 25 2.3
DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein. 23 9.5
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 9.5
AF203339-1|AAF19834.1| 156|Anopheles gambiae immune-responsive ... 23 9.5
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 23 9.5
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 125 bits (301), Expect = 2e-30
Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 5/135 (3%)
Frame = +1
Query: 4 LEFMCQTLGFKTTSKEQLDSWMLNAFQKNIPPHFNLLSSTD-----QFNPKADVSSGEEY 168
+E +CQ++G T +++LD +L AF +N+PP++NLL+ + D+ EEY
Sbjct: 496 MELICQSVGLSTNDRDKLDLLLLKAFLRNVPPNYNLLNYGSGGGGAEMGCHRDIDP-EEY 554
Query: 169 PTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFKHYRLADMLSDHMK 348
PTLLH+AAR+GLER+C QL+E PGG A MRN+ RTP+D+A HY++A L + +
Sbjct: 555 PTLLHFAARWGLERLCMQLIESPGGEIACEMRNINGRTPSDIAELAGHYKIASALKNFSQ 614
Query: 349 ISEFSNMYYYLKNMS 393
++E + MY+Y K +S
Sbjct: 615 MNELTTMYHYFKGVS 629
>Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 0.047
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 475 DSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNE 654
D C+D E ++V PP+P+ C Q L D++ + R +F K+ Q+ Q E
Sbjct: 60 DLVACQDGE--LLVHPPEPYFSDCQQRL----DSAKRDAEADRRAFTAEMQKKIQVNQWE 113
Query: 655 LPCHDDTADRIQQAI 699
+ +D I+ +
Sbjct: 114 ADRYVQESDTIRNQL 128
Score = 30.3 bits (65), Expect = 0.062
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 281 VRCRTFRIAIAAPPPGHSSSCQQTRSSPKRAAQCSRVGYSSPLETSAFGLNWSVD 117
V C+ + + P P + S CQQ S KR A+ R +++ ++ W D
Sbjct: 62 VACQDGELLVHPPEP-YFSDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEAD 115
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 30.7 bits (66), Expect = 0.047
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +1
Query: 475 DSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNE 654
D C+D E ++V PP+P+ C Q L D++ + R +F K+ Q+ Q E
Sbjct: 60 DLVACQDGE--LLVHPPEPYFSDCQQRL----DSAKRDAEADRRAFTAEMQKKIQVNQWE 113
Query: 655 LPCHDDTADRIQQAI 699
+ +D I+ +
Sbjct: 114 ADRYVQESDTIRNQL 128
Score = 30.3 bits (65), Expect = 0.062
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -1
Query: 281 VRCRTFRIAIAAPPPGHSSSCQQTRSSPKRAAQCSRVGYSSPLETSAFGLNWSVD 117
V C+ + + P P + S CQQ S KR A+ R +++ ++ W D
Sbjct: 62 VACQDGELLVHPPEP-YFSDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEAD 115
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 27.9 bits (59), Expect = 0.33
Identities = 24/118 (20%), Positives = 57/118 (48%)
Frame = +1
Query: 355 EFSNMYYYLKNMSDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPF 534
++S + ++LKN+SD ++ K+ + +KE + ++T + + +P + + D
Sbjct: 982 DYSKLEHHLKNLSDPDQIKKSGDSLAKELQSK-LDTLEKIQTPNMK------AMQKLDRV 1034
Query: 535 SETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQQAIEND 708
+E EE + + + K+++A+F+ K + L+ N D D I + + +
Sbjct: 1035 TEKIQSTNEEF-EAARKKAKKAKAAFEKVKNERCTLFTNCCNHISDAIDAIYKQLSRN 1091
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 25.8 bits (54), Expect = 1.3
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 523 PDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNE 654
PDP S+ C Q L++ ++ +Q A+ + QQ Q E
Sbjct: 90 PDPSSQFCQQLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQE 133
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.8 bits (54), Expect = 1.3
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +1
Query: 238 GGGAAIAMRNVR-HRTPADLARDFKHYRLADMLSDHMKI-----SEFSNMYYYLKNMSDN 399
G G + ++R RTP +L R+ + D+ DH +E S+ Y+++ ++D
Sbjct: 377 GSGYQVVTSHLRGSRTPPELDREVLERIVTDLFPDHNSFDWPMPTETSSEPYHIRPVTDL 436
Query: 400 EKQDKTEELESKE 438
E + +++ S++
Sbjct: 437 ELERIADDMCSRK 449
>AJ237664-1|CAB40379.2| 81|Anopheles gambiae putative infection
responsive shortpeptide protein.
Length = 81
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 468 YCGLAYLRRSRTRCHSVSPGSLQRNVHAKFGR 563
YCG YL R C + + + KFGR
Sbjct: 39 YCGYGYLNRKGVSCDGQTTINSCEDCKRKFGR 70
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 25.0 bits (52), Expect = 2.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 19 QTLGFKTTSKEQLDSWMLNAFQK--NIPPHFNLLSSTDQFNPKAD 147
Q+ +KT E++ S N + +PPH + S FN KAD
Sbjct: 715 QSAEWKTAMAEEMQSHQENGTWELVELPPHRKAIGSKWIFNCKAD 759
>DQ974161-1|ABJ52801.1| 409|Anopheles gambiae serpin 2 protein.
Length = 409
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 188 AQCSRVGYSSPLETSAFGLNW 126
A +V YS+P +T+A NW
Sbjct: 146 AMLEKVSYSNPTQTAATINNW 166
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.0 bits (47), Expect = 9.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 198 RAGACLLAAARMSRGRSRNR 257
RA +A RMSRGRSR++
Sbjct: 339 RATHASRSATRMSRGRSRSQ 358
>AF203339-1|AAF19834.1| 156|Anopheles gambiae immune-responsive
serpin-related proteinISerpF1 protein.
Length = 156
Score = 23.0 bits (47), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 188 AQCSRVGYSSPLETSAFGLNW 126
A +V YS+P +T+A NW
Sbjct: 47 AMLEKVSYSNPTQTAATINNW 67
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -3
Query: 528 IRGRHYDILFWIFADRRVHSITCLNNS 448
+RG HY ++ D+ +H ++C+ S
Sbjct: 791 LRGIHYAVIKKELQDKFLHRVSCILKS 817
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.315 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,002
Number of Sequences: 2352
Number of extensions: 14094
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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