Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0111
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 39 0.003
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 33 0.27
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 32 0.36
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 32 0.47
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 1.1
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 31 1.1
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.4
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 29 4.4
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 29 4.4
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 4.4
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 28 5.8
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 28 5.8
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 5.8
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 28 5.8
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 28 5.8
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 28 5.8
AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical ... 28 5.8
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 28 7.7
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 7.7
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 7.7
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL132862-28|CAB60545.2| 610|Caenorhabditis elegans Hypothetical... 28 7.7
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 28 7.7
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 7.7
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 28 7.7
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 28 7.7
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/90 (31%), Positives = 45/90 (50%)
Frame = +1
Query: 130 FNPKADVSSGEEYPTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFK 309
+N A++ G + +HWAAR GL +C L++ GGA +R+++ TP LA
Sbjct: 78 YNADANLIGGVLASSPIHWAARNGLVAMCAVLVK---GGAVCNVRDIQGYTPIHLAIQGN 134
Query: 310 HYRLADMLSDHMKISEFSNMYYYLKNMSDN 399
H L ++ F + Y K++SDN
Sbjct: 135 HVPL---------VAYFLLKFEYAKDISDN 155
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/90 (22%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 457 ETCDTVDSPI----CE-DPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLP 621
+T +T ++P+ C+ +PE V++SP P C Q+ + +E+ ++ + + P
Sbjct: 694 QTSETTETPLPDLSCDSNPESVVLISPRSPIGLACMQDWDSYIQMLEEASREFQYT---P 750
Query: 622 KVKEQQLYQNELPCHDDTADRIQQAIENDY 711
+ ++++ + E DD + I + +DY
Sbjct: 751 EDIDEEIEEEEDCDEDDDRECIPHILLSDY 780
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 32.3 bits (70), Expect = 0.36
Identities = 26/124 (20%), Positives = 55/124 (44%)
Frame = +1
Query: 331 LSDHMKISEFSNMYYYLKNMSDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDV 510
+ D +F ++ + D + QD+ E+ ESK+ E + + P +D + V
Sbjct: 82 VQDQKDHQDFQDLLDQPEETEDADHQDQLEDQESKDHR----EMQEDQEPPDVQDQQDHV 137
Query: 511 IVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQ 690
P + +Q+ +++ D+ D +EK + + + ++L + E P D IQ
Sbjct: 138 ENQEP-----STSQDSQDVQDHKDHAEKPDQPEIQEHQETMERLERTETP-EDQDHQGIQ 191
Query: 691 QAIE 702
+ +E
Sbjct: 192 ERME 195
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = +1
Query: 382 KNMSDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLE 561
K SDNE D EE++ KE++ + E D + E+PEQ D E Q E
Sbjct: 237 KEGSDNE--DDEEEVDEKEKEEEVKE--DNAEEKPAEEPEQPDEKEEEDHEDEREEQEEE 292
Query: 562 EISDNSD 582
+ SD D
Sbjct: 293 DSSDEED 299
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 274 HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 438
H T DL + H +L +DH + +E N Y +Y+K ++D +KQ K++EL E
Sbjct: 893 HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950
Query: 439 EDLRIIETCDTVDSPICEDPEQ 504
R E + ++ ++ E+
Sbjct: 951 RKRRESEEKERLEIEAKKEAER 972
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 274 HRTPADLARDFKHYRLADMLSDHMKISEFSNMY-YYLKN----MSDNEKQDKTEELESKE 438
H T DL + H +L +DH + +E N Y +Y+K ++D +KQ K++EL E
Sbjct: 893 HSTIRDLEKLVSHIKLTTSANDHFEKAE--NAYEHYVKRVDSMIADLKKQQKSDELAEIE 950
Query: 439 EDLRIIETCDTVDSPICEDPEQ 504
R E + ++ ++ E+
Sbjct: 951 RKRRESEEKERLEIEAKKEAER 972
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 394 DNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPP---DPFSETCTQNLEE 564
++ K+D E+ + +E+D + E D D E PE + S P D E + E
Sbjct: 3761 EDPKEDGKEDDQVEEDDDQ--ENVDERDRENDERPEDQMDTSDPSKDDEIPEKGEIDEAE 3818
Query: 565 ISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDDT 675
D+ DE++K+ + + ++Q QN+ D T
Sbjct: 3819 DEDDGDETDKEDEEAIEGDGEEDQNEDQNDQELEDPT 3855
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 382 KNMSDNEK--QDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQN 555
KNM ++ +D+T+E+ +KE+D + + D + E+D + E +N
Sbjct: 3733 KNMDQEQEAAEDQTDEMVAKEDDAQAPKEDPKEDGKEDDQVEED---DDQENVDERDREN 3789
Query: 556 LEEISDNSDESEKQSRASFKLPKVKEQQLYQNELPCHDDTADRIQQAIEND 708
E D D S+ ++P+ E ++E D+T ++AIE D
Sbjct: 3790 DERPEDQMDTSDPSK--DDEIPEKGEIDEAEDE-DDGDETDKEDEEAIEGD 3837
>Z83122-1|CAB05597.1| 293|Caenorhabditis elegans Hypothetical
protein R11A5.2 protein.
Length = 293
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 400 EKQDKTEELES-KEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEISDN 576
E+Q EE+ +EE LR E + P+ DPE P P E + E++
Sbjct: 149 ERQVAAEEMHRLREEQLRTTERPRLIVEPLRNDPEILPDEPSPGPSKEEFKMSSEDVFME 208
Query: 577 SDESEKQSRASFKLPKVKEQQLYQNE 654
+ + R + K+ E ++ N+
Sbjct: 209 DVQHHEDVRMEETIAKIDEVRIDDNK 234
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/92 (19%), Positives = 40/92 (43%)
Frame = +1
Query: 397 NEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEISDN 576
++ + ++E +SK+E + E + E+ P+P E + ++ D
Sbjct: 3 SKSRSSSKEKDSKKEKKKDKEKSSKEKKEKKDKKEKKSKTIKPEPEPEPVNEYEDDFEDY 62
Query: 577 SDESEKQSRASFKLPKVKEQQLYQNELPCHDD 672
D+ E+ K PKV+E+ ++++ D
Sbjct: 63 EDDFEEDDEEEKKAPKVEEKPQKESKVEAEVD 94
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +1
Query: 415 TEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEK 594
T + KEE+L IE +V P P + + V+P DP T Q E + ++
Sbjct: 343 TVAVPPKEENLPPIEPLPSVAGPY--QPPRTLPVAPGDPSESTFVQIHETETPSAPSPAS 400
Query: 595 QSRASFKLPKV 627
S S +P+V
Sbjct: 401 PSSVSVTIPRV 411
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Frame = +1
Query: 361 SNMYYYLKNMSDNEKQDKTEELESKEEDLRIIETCDTV--DSPICEDPEQDVIVSPPDPF 534
SN+ L S++ EELE +E+LRI+ + + DS D D +
Sbjct: 1643 SNLRQQLIEASESADLKSLEELEQLKEELRIVSEQNGLLKDSEARLLDHADEFAVQMDKY 1702
Query: 535 SETC---TQNLEE----ISDNSDESEKQSRASFKLPKVKEQ 636
E C T + E + + ++E ++Q ++ +L K+++Q
Sbjct: 1703 REKCEVLTAKIAELEAQLQNPAEEDQQQKTSNVELVKLRQQ 1743
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 490 EDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSR 603
+D E+D+++ PP E TQ LE S E+E S+
Sbjct: 898 DDEEEDIVIQPPP--KEMTTQELEAEKLKSAENEAMSK 933
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 490 EDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSR 603
+D E+D+++ PP E TQ LE S E+E S+
Sbjct: 898 DDEEEDIVIQPPP--KEMTTQELEAEKLKSAENEAMSK 933
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 391 SDNEKQDKTEELESKEEDLRIIETCDTVDSPICED--------PEQDVIVSPPDPFSE 540
S +E Q K EE + KEE + +E + P+ +D P + I+ PP P+++
Sbjct: 1236 SVDEIQVKEEEEDQKEETVGSVERQEPPKKPVADDHKSAIAPLPPANTIMPPPPPYNQ 1293
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Frame = +1
Query: 475 DSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVK-------- 630
D + E E + +P S T+ E ++ D+ EK + K K
Sbjct: 163 DGEVGEKKESEQPTDMVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEKEKALAEKRLE 222
Query: 631 -EQQLYQNELPCHDDTADRIQQAIEND 708
EQ+LY++ DDT+ I + D
Sbjct: 223 REQKLYKDLKSSSDDTSSSIDDKMNFD 249
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Frame = +1
Query: 475 DSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVK-------- 630
D + E E + +P S T+ E ++ D+ EK + K K
Sbjct: 163 DGEVGEKKESEQPTDMVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEKEKALAEKRLE 222
Query: 631 -EQQLYQNELPCHDDTADRIQQAIEND 708
EQ+LY++ DDT+ I + D
Sbjct: 223 REQKLYKDLKSSSDDTSSSIDDKMNFD 249
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 475 DSPICEDPEQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNE 654
++ I +PE+ IV P+P E T E + S SEK + + KV + +++
Sbjct: 127 EADIAPEPEKVAIVEKPEPKPEPIT---ETEASPSKASEKDAAVEVSVEKVDAETAQESD 183
Query: 655 LP 660
P
Sbjct: 184 SP 185
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical protein
H03E18.1 protein.
Length = 1147
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +1
Query: 343 MKISEFSNMYYYLKNMSDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIV-- 516
MK ++ + LK ++E E +D R++E V++ + E + I
Sbjct: 872 MKKTDQKTIETLLKAKIPESSNVDSQEKEDINKDPRLVEM-KKVEAQVLEKLAKMEITES 930
Query: 517 SPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQLYQNEL 657
+ PD S T +N+E S +S+ +++ ++ S K + + L +E+
Sbjct: 931 TAPDSTSSTIPENIETESTSSEITKQTAKTSMKSSIPEAEGLEDDEV 977
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 160 EEYPTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFKH------YRL 321
E+ T LH AA+ G QLL+ GA + NV +TP D+A + H +R+
Sbjct: 638 EKLNTPLHLAAKEGHTLPVCQLLK---RGADSNLANVDSKTPLDIAMECTHADIVTLFRV 694
Query: 322 ADMLSDHMKISEFSNMYYYLKN--MSDNEKQDKTEELESKEEDLR 450
M +D ++F+N +SD ++ TE+ + K E L+
Sbjct: 695 TIMRNDFN--ADFNNPMDETVEAVISDIARRAATEKEQKKTESLK 737
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 160 EEYPTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFKH------YRL 321
E+ T LH AA+ G QLL+ GA + NV +TP D+A + H +R+
Sbjct: 722 EKLNTPLHLAAKEGHTLPVCQLLK---RGADSNLANVDSKTPLDIAMECTHADIVTLFRV 778
Query: 322 ADMLSDHMKISEFSNMYYYLKN--MSDNEKQDKTEELESKEEDLR 450
M +D ++F+N +SD ++ TE+ + K E L+
Sbjct: 779 TIMRNDFN--ADFNNPMDETVEAVISDIARRAATEKEQKKTESLK 821
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta 1A
protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 160 EEYPTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFKH------YRL 321
E+ T LH AA+ G QLL+ GA + NV +TP D+A + H +R+
Sbjct: 722 EKLNTPLHLAAKEGHTLPVCQLLK---RGADSNLANVDSKTPLDIAMECTHADIVTLFRV 778
Query: 322 ADMLSDHMKISEFSNMYYYLKN--MSDNEKQDKTEELESKEEDLR 450
M +D ++F+N +SD ++ TE+ + K E L+
Sbjct: 779 TIMRNDFN--ADFNNPMDETVEAVISDIARRAATEKEQKKTESLK 821
>AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical
protein R02D3.3 protein.
Length = 532
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 499 EQDVIVSPPDPFSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQL 642
E++V+ +P DPF+E + EE++ + +EK R F L + + L
Sbjct: 245 EREVLPNPKDPFAECVRDDEEEMTKMT--AEKIQRKRFDLEHIDDNGL 290
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +1
Query: 394 DNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEISD 573
+ + D+ EE + EE+ E + + E+ E+D D SE + +E +
Sbjct: 575 EEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED----DEDEESEEESDEEDEEEE 630
Query: 574 NSDESEKQSRASFKLPKVKEQQLYQNE 654
D+SE + + + K P K+Q L N+
Sbjct: 631 EEDDSEPEEKPNPK-PSTKKQALILNK 656
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = +1
Query: 394 DNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEISD 573
+ + D+ EE + EE+ E + + E+ E+D D SE + +E +
Sbjct: 585 EEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED----DEDEESEEESDEEDEEEE 640
Query: 574 NSDESEKQSRASFKLPKVKEQQLYQNE 654
D+SE + + + K P K+Q L N+
Sbjct: 641 EEDDSEPEEKPNPK-PSTKKQALILNK 666
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 406 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVS 519
+DK E E EED +IE CD CED +Q++ +S
Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMS 478
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 406 QDKTEELESKEEDLRIIET--CDTVDSPICEDPEQDVIVS 519
+DK E E EED +IE CD CED +Q++ +S
Sbjct: 440 EDKNNE-EMMEEDNHLIEEIICDDRKKDDCEDSQQEIEMS 478
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 532 FSETCTQNLEEISDNSDESEKQSRASFKLPKVKEQQL 642
F+E L + SD DE E ++ S KLP K L
Sbjct: 646 FTEFGNMQLVDTSDEEDELEPNNKMSIKLPGTKNFDL 682
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 316 RLADMLSDHMKISE-FSNMYYYLKN-MSDNEKQDKTEELESKEEDLRIIET 462
R+ D+ +++ + E F+N L++ +D +++ ++LESK+E L + ET
Sbjct: 633 RVQDLHAENEALREAFNNCRQQLEDERADRRAEEERKDLESKQEQLELKET 683
>AL132862-28|CAB60545.2| 610|Caenorhabditis elegans Hypothetical
protein Y73F8A.19 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 4 LEFMCQTLGFKTTSKEQLDSWMLNAFQKNIPPHF 105
+EF+ ++LG +SW+ F IPPH+
Sbjct: 335 IEFVVRSLGDTLEPFNPTNSWLSYGFGAKIPPHY 368
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 27.9 bits (59), Expect = 7.7
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Frame = +1
Query: 160 EEYPTLLHWAARFGLERVCWQLLECPGGGAAIAMRNVRHRTPADLARDFKH------YRL 321
E+ T LH AA+ G QLL+ GA + NV +TP D+A + H +R+
Sbjct: 638 EKLNTPLHLAAKEGHTLPVCQLLK---RGADSNLANVDSKTPLDIAMECTHADIVTLFRV 694
Query: 322 ADMLSDHMKISEFSNMYYYLKN--MSDNEKQDKTEELESKEEDLR 450
M +D ++F N +SD ++ TE+ + K E L+
Sbjct: 695 TIMRNDFN--ADFDNPMDETVEAVISDIARRAATEKEQKKTESLK 737
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/88 (21%), Positives = 42/88 (47%)
Frame = +1
Query: 391 SDNEKQDKTEELESKEEDLRIIETCDTVDSPICEDPEQDVIVSPPDPFSETCTQNLEEIS 570
S+++K+D+ E+ + K+ED + + D D E E+ D E + EE
Sbjct: 131 SEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEE-----KKDDKEEKKEEKKEEKK 185
Query: 571 DNSDESEKQSRASFKLPKVKEQQLYQNE 654
+ E +K+ + + + K+++ ++E
Sbjct: 186 EEKKEEKKEEKKEEEKKEEKKEEKKEDE 213
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 27.9 bits (59), Expect = 7.7
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Frame = +1
Query: 289 DLARDFKHYRLADMLSDHMKI---SEFSNMYYYLKNMSD----NEKQDKTEELESKEEDL 447
D+ K+Y S+ +K+ + ++ + LK+ S NEK DK E S +
Sbjct: 60 DIKESLKNYSKFGKKSNFLKLLTAKQLKSLDHMLKSTSPDVEINEKNDKIWENGSFSGEH 119
Query: 448 RIIETCDTVDSPICEDPEQDVIVS-PPDPFSETCTQNLEEISDNSDE--SEKQSRASFKL 618
+ +T VD PE + + PP ++ + E+ ++ E S + +S ++
Sbjct: 120 VVAKTVKIVDGVAAHLPEHPIPANIPPLHVAQLYDDDFEQEDEDDLEWLSSQPGGSSSRI 179
Query: 619 PKVKEQQL 642
P V + L
Sbjct: 180 PDVPSEPL 187
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.7
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Frame = +1
Query: 289 DLARDFKHYRLADMLSDHMKI---SEFSNMYYYLKNMSD----NEKQDKTEELESKEEDL 447
D+ K+Y S+ +K+ + ++ + LK+ S NEK DK E S +
Sbjct: 60 DIKESLKNYSKFGKKSNFLKLLTAKQLKSLDHMLKSTSPDVEINEKNDKIWENGSFSGEH 119
Query: 448 RIIETCDTVDSPICEDPEQDVIVS-PPDPFSETCTQNLEEISDNSDE--SEKQSRASFKL 618
+ +T VD PE + + PP ++ + E+ ++ E S + +S ++
Sbjct: 120 VVAKTVKIVDGVAAHLPEHPIPANIPPLHVAQLYDDDFEQEDEDDLEWLSSQPGGSSSRI 179
Query: 619 PKVKEQQL 642
P V + L
Sbjct: 180 PDVPSEPL 187
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 382 KNMSDNEKQDKTEELESKEEDL-RIIETCDTVDSPICEDPEQD 507
KN+ +++ D E+LE +EEDL ++E D ++ ++ Q+
Sbjct: 321 KNLDGSDESDDDEDLEDEEEDLDDLLEDEDELEEDSDDEEAQE 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,275,371
Number of Sequences: 27780
Number of extensions: 340892
Number of successful extensions: 1616
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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