Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0110
(705 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 368 e-101
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 315 8e-85
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 273 3e-72
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 196 4e-49
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 195 1e-48
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 186 5e-46
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 184 2e-45
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 177 2e-43
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 159 8e-38
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 156 6e-37
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 153 4e-36
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 149 9e-35
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 146 6e-34
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 125 1e-27
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 1e-17
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 56 6e-07
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 56 8e-07
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 54 3e-06
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 54 3e-06
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 53 8e-06
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 52 1e-05
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 50 4e-05
UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n... 50 4e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89; Bacteri... 48 2e-04
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 47 5e-04
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 45 0.002
UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.006
UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosir... 42 0.015
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 42 0.020
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.026
UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidat... 40 0.060
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 40 0.079
UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial... 38 0.32
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.73
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.97
UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1; Methano... 36 1.3
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1; ... 35 1.7
UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome sh... 33 5.2
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 5.2
UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1... 33 5.2
UniRef50_O96282 Cluster: Putative uncharacterized protein PFB095... 33 6.8
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 368 bits (905), Expect = e-101
Identities = 176/195 (90%), Positives = 185/195 (94%)
Frame = +3
Query: 120 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 299
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 300 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 479
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 480 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 659
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSY
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSY 188
Query: 660 AIKXKDELGRVAKSN 704
AIK KDEL RVAKSN
Sbjct: 189 AIKKKDELERVAKSN 203
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 315 bits (773), Expect = 8e-85
Identities = 151/189 (79%), Positives = 171/189 (90%), Gaps = 1/189 (0%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 317
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 318 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 497
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 498 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKD 677
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYAIK KD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187
Query: 678 ELGRVAKSN 704
E+ RVAK+N
Sbjct: 188 EIERVAKAN 196
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 273 bits (669), Expect = 3e-72
Identities = 140/206 (67%), Positives = 167/206 (81%)
Frame = +3
Query: 87 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 266
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 267 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 446
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 447 NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 626
GPREDSTRIG AGTVRRQAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEI 176
Query: 627 INAAKGSSNSYAIKXKDELGRVAKSN 704
INAAKGSSNSYAIK KDEL RVAKSN
Sbjct: 177 INAAKGSSNSYAIKKKDELERVAKSN 202
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 196 bits (478), Expect = 4e-49
Identities = 96/106 (90%), Positives = 100/106 (94%)
Frame = +3
Query: 387 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 566
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 567 AREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVAKSN 704
AREAAFRNIKTIAEC+ADELINAAKGSSNSYAIK KDEL RVAKSN
Sbjct: 234 AREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 279
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 195 bits (475), Expect = 1e-48
Identities = 87/185 (47%), Positives = 132/185 (71%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 320
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 321 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 500
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 501 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDE 680
R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYAIK K +
Sbjct: 139 REAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKKLD 198
Query: 681 LGRVA 695
L + A
Sbjct: 199 LEKNA 203
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 186 bits (453), Expect = 5e-46
Identities = 96/188 (51%), Positives = 133/188 (70%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 320
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 321 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 500
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 501 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDE 680
R +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA+ K E
Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKE 199
Query: 681 LGRVAKSN 704
+ R+A+SN
Sbjct: 200 IERIAQSN 207
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 184 bits (448), Expect = 2e-45
Identities = 92/187 (49%), Positives = 131/187 (70%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 320
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 321 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 500
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 501 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDE 680
+AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I AA+ + ++I+ K+E
Sbjct: 129 HEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEE 188
Query: 681 LGRVAKS 701
+ R+A++
Sbjct: 189 IERIAEA 195
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 177 bits (432), Expect = 2e-43
Identities = 93/187 (49%), Positives = 122/187 (65%)
Frame = +3
Query: 144 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 323
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 324 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 503
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 504 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDEL 683
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I AA SYA++ ++EL
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREEL 215
Query: 684 GRVAKSN 704
R+A ++
Sbjct: 216 ERIAAAS 222
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 159 bits (385), Expect = 8e-38
Identities = 78/185 (42%), Positives = 122/185 (65%)
Frame = +3
Query: 147 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 326
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 327 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 506
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 507 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELG 686
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI AA + S++I KD
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKE 182
Query: 687 RVAKS 701
RVAK+
Sbjct: 183 RVAKA 187
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 156 bits (378), Expect = 6e-37
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 1/188 (0%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 320
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 321 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 500
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 501 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGS-SNSYAIKXKD 677
Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+ A+K S+A+K K+
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKE 184
Query: 678 ELGRVAKS 701
E RVA+S
Sbjct: 185 EKERVAQS 192
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 153 bits (371), Expect = 4e-36
Identities = 86/213 (40%), Positives = 126/213 (59%)
Frame = +3
Query: 57 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 236
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 237 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 416
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 417 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 596
P+QVLV+A+ N+ PRE++ R+ G QAVD +P RRV+QA+ L GA A+F+
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPT 173
Query: 597 TIAECVADELINAAKGSSNSYAIKXKDELGRVA 695
AE +A++L AA + +YAI K E RVA
Sbjct: 174 DAAEALANQLAGAADYNVQTYAIGQKKEKERVA 206
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 149 bits (360), Expect = 9e-35
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Frame = +3
Query: 105 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 278
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 279 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 458
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 459 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAA 638
RE++ R+ G ++VD +PLRRV+ AI + +++ ++ K + +ADELI A+
Sbjct: 122 REETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELIAAS 181
Query: 639 KGSSNSYAIKXKDELGRVAKS 701
KG + Y++ K+E R+AKS
Sbjct: 182 KGDAKCYSVGKKEEKERIAKS 202
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 146 bits (353), Expect = 6e-34
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 16/204 (7%)
Frame = +3
Query: 141 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 320
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 321 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 452
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 453 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELIN 632
PRED+T + G AVD+SPLRR++ A+ + GA +R + AE +A+E+I
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIIL 193
Query: 633 AAKGSSNSYAIKXKDELGRVAKSN 704
AA SYA K E+ R+A+S+
Sbjct: 194 AANKDPKSYAYSKKLEIERIAESS 217
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 125 bits (301), Expect = 1e-27
Identities = 68/176 (38%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Frame = +3
Query: 177 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 353
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 354 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 533
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
Query: 534 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVAKS 701
+++A+ + GA +A+F++ I +C+A+E++ AA+ +NS+AI K+E+ RVA S
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEILLAARNDANSFAISKKEEIERVAAS 180
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 285 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 440
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 56.4 bits (130), Expect = 6e-07
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Frame = +3
Query: 306 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 479
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 480 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 659
G G+ + ++V R N A+ + ARE A K+++ +A+E+++AA + +S
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWITKYARERAG---KSMSMKLANEIMDAANETGSS- 134
Query: 660 AIKXKDELGRVAKSN 704
I+ ++E+ R+A++N
Sbjct: 135 -IRKREEIHRMAEAN 148
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 56.0 bits (129), Expect = 8e-07
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +3
Query: 270 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 449
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 450 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 623
+ P + RIG G+ + V+VS R N ++ + +R+ R T++ +A+E
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWIIQYSRQRVGR---TMSIKLANE 123
Query: 624 LINAAKGSSNSYAIKXKDE 680
+I+ A N+ IK K+E
Sbjct: 124 IIDTANDIGNT--IKKKEE 140
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 54.4 bits (125), Expect = 3e-06
Identities = 37/134 (27%), Positives = 66/134 (49%)
Frame = +3
Query: 258 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 437
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 438 AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVA 617
+ GP +T+ G +++ V + PL + + + + R + +A
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI-PLNEKQRNRFAIKWILEASNSRKSNDFSVRLA 218
Query: 618 DELINAAKGSSNSY 659
+E+INA +G S+ Y
Sbjct: 219 EEIINAYQGKSSGY 232
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 54.4 bits (125), Expect = 3e-06
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = +3
Query: 264 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 443
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 444 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 620
P TR + G+ R+ +++ + AI L +++ RN +A ++
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLLEASQKRPGRN---MAFKLSS 123
Query: 621 ELINAAKGSSNSYAIKXKDELGRVAKSN 704
EL++AAKGS AI+ K+ R+A++N
Sbjct: 124 ELVDAAKGSGG--AIRKKEATHRMAEAN 149
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 52.8 bits (121), Expect = 8e-06
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Frame = +3
Query: 306 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 479
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 480 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 659
G G+ + +++ + AI L +R+ RN +A ++ EL++AAKGS +
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 133
Query: 660 AIKXKDELGRVAKSN 704
AI+ K+E R+A++N
Sbjct: 134 AIRKKEETHRMAEAN 148
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 52.4 bits (120), Expect = 1e-05
Identities = 46/147 (31%), Positives = 73/147 (49%)
Frame = +3
Query: 264 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 443
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 444 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADE 623
P+ +AG R+ +++ P + AI L +R+ +N +A ++ E
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLLEASRKRPGQN---MAIKLSAE 122
Query: 624 LINAAKGSSNSYAIKXKDELGRVAKSN 704
L++AAKG AI+ K+E R+A++N
Sbjct: 123 LVDAAKGKGG--AIRKKEETRRMAEAN 147
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 51 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 215
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
Score = 39.9 bits (89), Expect = 0.060
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3
Query: 642 GSSNSYAIKXKDELGRVAKSN 704
GSSNSYAIK KDEL RVAKSN
Sbjct: 56 GSSNSYAIKKKDELERVAKSN 76
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 50.4 bits (115), Expect = 4e-05
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Frame = +3
Query: 297 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 476
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 477 IGRAGTVRRQA-VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 653
R G Q V V P RR + L T AR R T+ + +A E+++AA ++
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLVTIAR---LRGEHTMQDRLAKEILDAA--NNT 131
Query: 654 SYAIKXKDELGRVAKSN 704
A+K +++ R+A++N
Sbjct: 132 GAAVKKREDTHRMAEAN 148
>UniRef50_Q06J33 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Bigelowiella natans|Rep: Chloroplast 30S ribosomal
protein S7 - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 159
Score = 50.4 bits (115), Expect = 4e-05
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +3
Query: 345 GKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRIGRAGTVRRQAVDV 518
G K +A +I+ + + I L+T ++P++++ A+ N P + S R+G G+ + V +
Sbjct: 34 GNKALARKIIYRSLKDIELVTKQDPIKIVEQAVSNVTPFVEIRSRRLG--GSTTQIPVFI 91
Query: 519 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVA 695
+ R V AI WL +A N +I + ++ E++NA+ G AIK +DE+ R+A
Sbjct: 92 NNERGVTLAIRWLFQASKNKAG--NKYSIIKRLSSEIVNASNGMGE--AIKKRDEMHRMA 147
Query: 696 KSN 704
++N
Sbjct: 148 EAN 150
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 391 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 227
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89;
Bacteria|Rep: 30S ribosomal protein S7 - Pseudomonas
aeruginosa
Length = 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Frame = +3
Query: 258 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 437
R A KR A ++ M H +GKK +A RIV A + + +PL+
Sbjct: 5 RVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEK 64
Query: 438 AIINSGPRED--STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC 611
A+ P + S R+G G + V+V P RR A+ L AR+ R K++A
Sbjct: 65 ALDAIAPLVEVKSRRVG--GATYQVPVEVRPSRRNALAMRWLVDFARK---RGEKSMALR 119
Query: 612 VADELINAAKGSSNSYAIKXKDELGRVAKSN 704
+A EL++AA+G A+K ++++ R+A++N
Sbjct: 120 LAGELLDAAEG--KGAAVKKREDVHRMAEAN 148
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/133 (24%), Positives = 67/133 (50%)
Frame = +3
Query: 261 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 440
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 441 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 620
+ P +T++ + G + + V PL++ + + + A+ + + +++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKKRQRNRYPITWILEGASKKKSPDYSVRLSE 231
Query: 621 ELINAAKGSSNSY 659
E+I+A +G S+ Y
Sbjct: 232 EIISAYEGKSSGY 244
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 44.8 bits (101), Expect = 0.002
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Frame = +3
Query: 294 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 470
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 471 TRIGRAGTVRRQAVDVSPLRRVNQAI---WLLCTGAREAAFRNIKTIAECVADELINAAK 641
RAG++ +Q V P +AI W++ ++A K + + E+ A+
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERARAIAIRWIVSACQKKAG----KDMISKLFSEISEAS- 129
Query: 642 GSSNSYAIKXKDELGRVAKSN 704
+ N A + K+EL ++A SN
Sbjct: 130 -NKNGAAFRKKEELHKMALSN 149
>UniRef50_Q85FT8 Cluster: Chloroplast 30S ribosomal protein S7; n=2;
Cyanidioschyzon merolae|Rep: Chloroplast 30S ribosomal
protein S7 - Cyanidioschyzon merolae (Red alga)
Length = 148
Score = 43.2 bits (97), Expect = 0.006
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Frame = +3
Query: 306 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR--EDSTRI 479
RL L++H GKK +A RIV A + I ++ + +L A+ P + R+
Sbjct: 14 RLVELLIVHVLRKGKKSLARRIVYEALKRIEERNQQSGVLMLEQAVSQVMPLVCVKARRV 73
Query: 480 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 656
G G + +V P +N A+ W++ + A R+ K++A +A E+ +AA G+
Sbjct: 74 G--GATYQVPQEVKPYTGINNALRWIV----KYAKDRSGKSMAIKLAAEIWDAAHGTGG- 126
Query: 657 YAIKXKDELGRVAKSN 704
AI+ K+E R+A++N
Sbjct: 127 -AIRKKEETHRMAEAN 141
>UniRef50_A6YGB1 Cluster: 30S ribosomal protein S7; n=1; Leptosira
terrestris|Rep: 30S ribosomal protein S7 - Leptosira
terrestris (Pleurastrum terrestre)
Length = 154
Score = 41.9 bits (94), Expect = 0.015
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = +3
Query: 309 LTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRA 488
L ++++ H GKK +A + I T ++PL+V+ A+ N P +
Sbjct: 22 LVHTIVNHLMKKGKKSLAYMMFYETLSEIKQKTEQDPLEVIQKAVNNVRPLVIVKSRRVS 81
Query: 489 GTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAI 665
G+ R+ + V V AI W+L + K++ + +E ++A+K N AI
Sbjct: 82 GSTRQVPLSVDYEIGVALAIRWILAACRKRVG----KSMISKMTNEFLDASKNIGN--AI 135
Query: 666 KXKDELGRVAKSN 704
+ KDE+ ++A++N
Sbjct: 136 RKKDEIAKMAQAN 148
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 41.5 bits (93), Expect = 0.020
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +3
Query: 300 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 479
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISPLMKLVSA 181
Query: 480 GRAGTVRRQAVDVSPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 656
R + + +R A+ W+L E + K +++ + E+I +SN
Sbjct: 182 KRFNKSVEFPMPLKERQRRRIALQWIL----GECKSSSPKRLSDRIVKEIIAIRSKTSNC 237
Query: 657 YAIKXKDELGRVAKSN 704
+ K KD L R+ N
Sbjct: 238 F--KKKDHLHRMCLVN 251
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 41.1 bits (92), Expect = 0.026
Identities = 35/137 (25%), Positives = 63/137 (45%)
Frame = +3
Query: 294 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 473
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAPLVKVQ 219
Query: 474 RIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 653
+ G + V ++ + +A+ + +++ R ++ +A E + +G+S+
Sbjct: 220 SKKQGGKSLQVPVALTQRQSTRKALTWIIEASKKRPDRELE---RRLAAEFLAVVEGTSS 276
Query: 654 SYAIKXKDELGRVAKSN 704
AI K+E ++A N
Sbjct: 277 --AIVKKEEQHKIATVN 291
>UniRef50_Q9AIG8 Cluster: 30S ribosomal protein S7; n=2; Candidatus
Carsonella ruddii|Rep: 30S ribosomal protein S7 -
Carsonella ruddii
Length = 156
Score = 39.9 bits (89), Expect = 0.060
Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Frame = +3
Query: 339 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDV 518
NNGKK +A +I ++ II + +NP ++ + N P + + G+V + + +
Sbjct: 32 NNGKKNLAQKIFYYSISIISIRLNKNPFILIKKILYNVQPDFEIKKKKIGGSVYKIPIKI 91
Query: 519 SPLRRVNQAI-WLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVA 695
+ R + ++ W++ + + RN + ELI++ +NS + K KDEL ++
Sbjct: 92 NLKRSLMFSMKWIV----KNSKLRNENGYKNKLVGELIDSY--YNNSLSTKQKDELNKII 145
Query: 696 KSN 704
N
Sbjct: 146 DQN 148
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 39.5 bits (88), Expect = 0.079
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Frame = +3
Query: 294 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 473
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAPLM-MV 193
Query: 474 RIGRAGTVRRQAVDVSPL--RRVNQAIW-LLCTGAREAAFRNIKTIAECVADELINAAKG 644
+ G + + V PL R+ N+ W + GA + R A + +EL+ +G
Sbjct: 194 KTFNTGVAKAAVIPV-PLSQRQRNRIAWKWIVEGANK---RVSNDFAVRLGEELVAVYEG 249
Query: 645 SSNSYAIKXKDELGRVA 695
S+ + + +D++ + A
Sbjct: 250 KSSGF--EKRDQMHKTA 264
>UniRef50_P47150 Cluster: 37S ribosomal protein S7, mitochondrial
precursor; n=4; Saccharomycetaceae|Rep: 37S ribosomal
protein S7, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 247
Score = 37.5 bits (83), Expect = 0.32
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 300 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 479
++ +TN +M HG KK A I+ A +++ T ++P+Q L ++ P T+
Sbjct: 114 LDHITNMIMRHG----KKEKAQTILSRALYLVYCQTRQDPIQALEKSLDELAPLM-MTKT 168
Query: 480 GRAGTVRRQAVDVSPL--RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSN 653
G + + V PL R+ N+ W + A R A + +EL AKG+S+
Sbjct: 169 FNTGVAKASVIPV-PLNKRQRNRIAWNWI--VQSANQRVSSDFAVRLGEELTAIAKGTSS 225
Query: 654 SYAIKXKDELGRVA 695
A + +D++ + A
Sbjct: 226 --AFEKRDQIHKTA 237
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.73
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +3
Query: 195 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 374
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 375 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 491
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.97
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 39 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 218
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 219 KEKYAKYLPH 248
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_O93636 Cluster: 30S ribosomal protein S7P; n=1;
Methanococcoides methylutens|Rep: 30S ribosomal protein
S7P - Methanococcoides methylutens
Length = 69
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 564 GAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVAKS 701
GA ++AF++ + +E +A ELI A+ + ++I KD RVAK+
Sbjct: 22 GANQSAFKSKRXASESLASELIAASNRDAKCFSINRKDGKERVAKA 67
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +3
Query: 30 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 200
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 201 QDYISVKEKYAKYLPHSAG 257
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S7 -
Astasia longa (Euglenophycean alga)
Length = 178
Score = 35.1 bits (77), Expect = 1.7
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +3
Query: 339 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR-EDSTRIGRAGTVRRQAVD 515
+ GKK +A I + + I + ENPL + A+ N+ P E T+ + G + + ++
Sbjct: 32 SKGKKNIARYIFYKSMQNIEKIKNENPLDIFKKAVDNATPSIELRTQKRKKGQISKISIK 91
Query: 516 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKXKDEL 683
RR A+ + A++ R+ K I + + E+++A ++ A++ K+E+
Sbjct: 92 TKLERRNKIALKFIINSAKK---RSEKNIIQKLQGEILDAY--NNTGAAVQKKEEI 142
>UniRef50_Q4SMB1 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 292
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 582 FRNIKTIAECVADELINAAKGSSNSYAIKXKDEL 683
FRN+K I + V D+L+ KGSS + K K+EL
Sbjct: 126 FRNVKDIEDHVKDKLLLVKKGSSTELSDKEKNEL 159
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 439 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 525
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_P46745 Cluster: Mitochondrial ribosomal protein S7; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S7 - Prototheca wickerhamii
Length = 222
Score = 33.5 bits (73), Expect = 5.2
Identities = 29/103 (28%), Positives = 47/103 (45%)
Frame = +3
Query: 396 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 575
+LL + L+VL A+ N P + ++ RAG +S + AI + A++
Sbjct: 113 NLLETISVLEVLSIALKNVTPSVELRKVRRAGNTFLIPAILSQHKANTLAIRWVIESAKK 172
Query: 576 AAFRNIKTIAECVADELINAAKGSSNSYAIKXKDELGRVAKSN 704
+ + AEC+ADE+ A A + +DEL A SN
Sbjct: 173 KQQNSKQNFAECLADEIYQAY--LKQGKARQKRDELHSAAISN 213
>UniRef50_O96282 Cluster: Putative uncharacterized protein PFB0950w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0950w - Plasmodium falciparum
(isolate 3D7)
Length = 307
Score = 33.1 bits (72), Expect = 6.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 638 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSA 528
SCI IC+ +C C I C +C C+ C+ SA
Sbjct: 215 SCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 6.8
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 303 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 476
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 477 IG 482
IG
Sbjct: 535 IG 536
>UniRef50_A6EW85 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 279
Score = 32.7 bits (71), Expect = 9.0
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 498 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSY 659
RR+A DV RV W++ T EAAF ++ IA+ A + A KG+S+ +
Sbjct: 47 RRRARDVFATDRVQTNRWIV-TVLDEAAFAELQNIAQAPASRVDAAKKGNSHRH 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,225,651
Number of Sequences: 1657284
Number of extensions: 13940461
Number of successful extensions: 36316
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 34355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36078
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -