Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0109
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   3.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.0  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 512 LITSSRVTNEVCSEANSTK 456
           L   +++  ++C EANSTK
Sbjct: 303 LFILAKIVTDLCQEANSTK 321


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = -1

Query: 290 LVTF-CSTTWLKSP 252
           LV F CST WLK P
Sbjct: 306 LVNFDCSTMWLKDP 319


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 533 LTRLFVILITSSRVTNEVCSEANSTK 456
           +T +F +   S R + ++C+EAN TK
Sbjct: 200 VTYVFDLFYLSKRAS-DLCNEANKTK 224


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 334 VTLPIFESYQDGSDTY 381
           VT+  F SYQ G+ TY
Sbjct: 160 VTIIFFASYQYGTKTY 175


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 334 VTLPIFESYQDGSDTY 381
           VT+  F SYQ G+ TY
Sbjct: 160 VTIIFFASYQYGTKTY 175


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 249 CELSFSQRESSFFHHFTHKG 190
           C+  FSQ  S   H  TH G
Sbjct: 55  CDRRFSQSSSVTTHMRTHSG 74


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 249 CELSFSQRESSFFHHFTHKG 190
           C+  FSQ  S   H  TH G
Sbjct: 311 CDRRFSQSSSVTTHMRTHSG 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,313
Number of Sequences: 336
Number of extensions: 2684
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)