Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0109
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    27   0.62 
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    26   0.82 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.4  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   5.8  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   7.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.6  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   7.6  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 116 PWPFTAPARRPLINIWAPREGKIAN 42
           PWP  +P   P+ N+W+  + ++ N
Sbjct: 259 PWPALSPDLNPIENLWSTLKRQLKN 283


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 116 PWPFTAPARRPLINIWAPREGKIAN 42
           PWP  +P   P+ N+W+  +  + N
Sbjct: 187 PWPALSPDLNPIENLWSTLKRHVKN 211


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 406 HHEPNQPTHRYQNHPGMTQRLGG*HQQH 323
           H  P+   H + +HP     L G H QH
Sbjct: 499 HAHPHHHHHHHHHHPTAAD-LAGYHHQH 525


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 113 WPFTAPARRPLINIWA 66
           WP  +P   P+ N+WA
Sbjct: 178 WPALSPDLNPIENLWA 193


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 137 SAFFLRRPWPFTAPARRPLINIWAPREGKI 48
           +A FLR  +P      RPLINI+   +G +
Sbjct: 62  AAHFLRNTYPLL----RPLINIFLKTDGSL 87


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 231 QRESSFFHHFTHKGFSLNDFAQDHTEPH 148
           Q++ S +H   H G S +     H  PH
Sbjct: 166 QQQPSSYHQQQHPGHSQHHHHHHHHHPH 193


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 406 HHEPNQPTHRYQNHPGMTQRLGG 338
           H+EP  P H Y+   G   R GG
Sbjct: 500 HYEPLDPEHVYRVATGAYIRKGG 522


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,519
Number of Sequences: 2352
Number of extensions: 10988
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)