Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0108
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0W7D8 Cluster: Putative uncharacterized protein precur... 40 0.052
UniRef50_Q1JWR0 Cluster: Putative uncharacterized protein precur... 37 0.36
UniRef50_Q39ZD3 Cluster: Putative uncharacterized protein precur... 34 3.4
UniRef50_A7H8W6 Cluster: Hydroxylamine oxidase precursor; n=3; P... 34 3.4
UniRef50_A5GEG8 Cluster: Putative uncharacterized protein precur... 34 3.4
UniRef50_Q6ZSL2 Cluster: CDNA FLJ45410 fis, clone BRHIP3032311; ... 34 3.4
UniRef50_P13508 Cluster: Protein glp-1 precursor; n=27; Caenorha... 34 3.4
UniRef50_UPI0000DBFC46 Cluster: UPI0000DBFC46 related cluster; n... 33 4.5
UniRef50_A7BTM5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_A5VUL3 Cluster: TRm24 transposase; n=1; Brucella ovis A... 33 5.9
UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domai... 33 7.8
UniRef50_Q8X0I0 Cluster: Related to regulator of deoxyribodipyri... 33 7.8
>UniRef50_A0W7D8 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter lovleyi SZ|Rep: Putative
uncharacterized protein precursor - Geobacter lovleyi SZ
Length = 418
Score = 39.9 bits (89), Expect = 0.052
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 DCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWH-WLGREN 238
DC +CHT + S++ ++ + C + +D+PQW W G ++
Sbjct: 153 DCQNCHTRHAFSKAEANEPEACQTCHMGFDHPQWEMWSGSKH 194
>UniRef50_Q1JWR0 Cluster: Putative uncharacterized protein
precursor; n=1; Desulfuromonas acetoxidans DSM 684|Rep:
Putative uncharacterized protein precursor -
Desulfuromonas acetoxidans DSM 684
Length = 427
Score = 37.1 bits (82), Expect = 0.36
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = +2
Query: 68 ELRHDNVQNEINVLEDDCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 217
E + D + + C CHT + S K C + YD+PQW
Sbjct: 134 EQKADQLAKGYRYQNNSCDECHTRHAFSLKEAQNPKACQQCHMGYDHPQW 183
>UniRef50_Q39ZD3 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter metallireducens GS-15|Rep:
Putative uncharacterized protein precursor - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 413
Score = 33.9 bits (74), Expect = 3.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 119 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 217
C SCHT S S + C + +D+PQW
Sbjct: 155 CDSCHTRHSFSVKEARDPRACRTCHMGFDHPQW 187
>UniRef50_A7H8W6 Cluster: Hydroxylamine oxidase precursor; n=3;
Proteobacteria|Rep: Hydroxylamine oxidase precursor -
Anaeromyxobacter sp. Fw109-5
Length = 442
Score = 33.9 bits (74), Expect = 3.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 119 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 217
C +CHT S++ + + C + +D+PQW
Sbjct: 169 CDACHTRHLFSKAEARRPEACQTCHMGFDHPQW 201
>UniRef50_A5GEG8 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Putative uncharacterized protein precursor - Geobacter
uraniumreducens Rf4
Length = 436
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 92 NEINVLEDDCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 217
N + +E C SCHTN + S + C + D+PQW
Sbjct: 148 NYCHNVESSCASCHTNHNTSLAIVRDPNSCAKCHMGPDHPQW 189
>UniRef50_Q6ZSL2 Cluster: CDNA FLJ45410 fis, clone BRHIP3032311;
n=1; Homo sapiens|Rep: CDNA FLJ45410 fis, clone
BRHIP3032311 - Homo sapiens (Human)
Length = 286
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -1
Query: 317 HIDLFDSPAPTSRCSNVCSFGWEF*SCSPVPANAIGDSRNLNQRPDKLCFCPVYSSIQIC 138
H+ + P S VCS GW C PVPA + + +L + FCP + + C
Sbjct: 136 HVSEVGNLQPPSHSLQVCSGGW---GCVPVPAVSPWVAGHLLSGGKLMHFCPARTGVSTC 192
Query: 137 S 135
S
Sbjct: 193 S 193
>UniRef50_P13508 Cluster: Protein glp-1 precursor; n=27;
Caenorhabditis|Rep: Protein glp-1 precursor -
Caenorhabditis elegans
Length = 1295
Score = 33.9 bits (74), Expect = 3.4
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 122 GSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGC 301
GS T S + SR+ P +D + P H+ S ++TS + E
Sbjct: 1198 GSRKTPTSAASSRETNHLTPPPSDGSFSSPSPHYYPTTTSTPNRMETSPEY-MFNHEMAP 1256
Query: 302 QINLCDILPPPPYESPENRH 361
+N PPPY+ P RH
Sbjct: 1257 PVNAMWYTTPPPYQDPNYRH 1276
>UniRef50_UPI0000DBFC46 Cluster: UPI0000DBFC46 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFC46 UniRef100 entry -
Rattus norvegicus
Length = 501
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Frame = -3
Query: 636 RLGIILHY-QKXXXXXXXXXXXXLICFLFLNSI---TLRRH---RYSDFLLKM*ILLDFI 478
++ ++LHY QK C + N I T+ H +YSD++++M ++L++
Sbjct: 169 QMTVVLHYCQKYSAYIIHMTVVLNYCQKYSNYIIHMTVVLHYCQKYSDYIIQMTVVLNYC 228
Query: 477 INYLIFKIHKKIGKHYC 427
Y + IH + HYC
Sbjct: 229 QKYSAYIIHMIVVLHYC 245
>UniRef50_A7BTM5 Cluster: Putative uncharacterized protein; n=2;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 507
Score = 33.1 bits (72), Expect = 5.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 119 CGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQW 217
C +CHT S S + C + +D+PQW
Sbjct: 187 CDACHTRHSFKTSEARDPRACSNCHMGFDHPQW 219
>UniRef50_A5VUL3 Cluster: TRm24 transposase; n=1; Brucella ovis ATCC
25840|Rep: TRm24 transposase - Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512)
Length = 168
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 71 LRHDNVQNEINVLED---DCGSCHTNRSGSRSRQDKSKVCPAADLDYDYPQWH 220
LR D+++ +N +C +C+ R S + KS P A D P WH
Sbjct: 97 LRDDHLRQNLNFWRSVVVECFNCNLRRQTSDRSETKSTSAPIAPFPEDLPSWH 149
>UniRef50_Q5CVN7 Cluster: Splicing factor SRP40 like 2x RRM domains;
n=2; Cryptosporidium|Rep: Splicing factor SRP40 like 2x
RRM domains - Cryptosporidium parvum Iowa II
Length = 416
Score = 32.7 bits (71), Expect = 7.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 326 PPPPYESPENRHNYGSEK 379
PPPPYE P R+ +GSE+
Sbjct: 292 PPPPYEDPRERYMHGSER 309
>UniRef50_Q8X0I0 Cluster: Related to regulator of
deoxyribodipyrimidine photo-lyase PHR1; n=3;
Pezizomycotina|Rep: Related to regulator of
deoxyribodipyrimidine photo-lyase PHR1 - Neurospora
crassa
Length = 1914
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 164 DKSKVCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINLCDILPPPPYE 343
DK+K DLD + WH+LG ++ + N +R + + N D +P PP
Sbjct: 920 DKNKEQVKIDLDKENQVWHYLGPTST---EARAQYTENPSRKQHNSKSNFLDTIPKPPPT 976
Query: 344 SP 349
P
Sbjct: 977 YP 978
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,337,710
Number of Sequences: 1657284
Number of extensions: 9827278
Number of successful extensions: 27457
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27447
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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