Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0108
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    27   0.10 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   2.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   2.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.8  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 149 IQICSCGKNRSRPPRH*FHSVH 84
           I I  C  +R RPPRH FH  H
Sbjct: 246 IPIRQCDDHRDRPPRH-FHEEH 266


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +2

Query: 176 VCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINL 313
           +C    + +  PQ H L R+N F           + RS++  QI L
Sbjct: 68  ICEDCYMLFREPQLHNLCRKNCFTTDYFKGCIDTLQRSDEEAQIQL 113


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +2

Query: 176 VCPAADLDYDYPQWHWLGRENSFKIPIQTSRHSNIARSEQGCQINL 313
           +C    + +  PQ H L R+N F           + RS++  QI L
Sbjct: 68  ICEDCYMLFREPQLHNLCRKNCFTTDYFKGCIDTLQRSDEEAQIQL 113


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 215 IGDSRNLNQRPDKLCFC 165
           I DSR + + P +L FC
Sbjct: 211 INDSRKVTRFPTELTFC 227


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 317 HIDLFDSPAPTSRCSNVCSFGWE 249
           HI +   P+P +  SNV    W+
Sbjct: 220 HIFVKSRPSPATIISNVTVISWQ 242


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 317 HIDLFDSPAPTSRCSNVCSFGWE 249
           HI +   P+P +  SNV    W+
Sbjct: 220 HIFVKSRPSPATIISNVTVISWQ 242


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 317 HIDLFDSPAPTSRCSNVCSFGWE 249
           HI +   P+P +  SNV    W+
Sbjct: 540 HIFVKSRPSPATIISNVTVISWQ 562


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,896
Number of Sequences: 336
Number of extensions: 2726
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)