Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0108
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    24   3.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.8  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   6.3  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 226 GTGEQLQNSHPNEQTFEHRE 285
           GT +Q+ NSHP E     +E
Sbjct: 33  GTDQQMANSHPEEPIVVEKE 52


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 110  EDDCGSCHTNRSGSRSRQ-DKSKVCPAAD 193
            ED C +C  + SGS+  Q ++   CP  D
Sbjct: 981  EDGCHACDCDPSGSKGSQCNQYGQCPCND 1009


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 62  YRELRHDNVQNEINVLEDDCGSCH 133
           Y+E   D+ +N ++VLE D  SCH
Sbjct: 419 YQEWVQDSCRNIVHVLE-DIPSCH 441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,380
Number of Sequences: 2352
Number of extensions: 10291
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)