Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0106
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.9  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.9  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 713 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 552
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 407 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 459


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 713 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 552
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 415 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 467


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 292 LDSNPYYWKCFTSL 251
           LD+NP++ KC  SL
Sbjct: 49  LDANPHFVKCVASL 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,737
Number of Sequences: 2352
Number of extensions: 13098
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)