Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0097
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.4  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    23   9.5  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           23   9.5  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           23   9.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 370 KTLRFNSKNSSKTPKYRIFIK 308
           K L F  KN   TPK+R+ ++
Sbjct: 34  KRLIFQDKNKYNTPKFRLIVR 54


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 409 FVTWRTPMWNKENKTLRFNSKNSSKTPKYRIF----IKHPTKFYNTNYRQK 269
           F  W+  +  K N  + F++   S     ++F     K+  K Y  N+ +K
Sbjct: 23  FGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEK 73


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 409 FVTWRTPMWNKENKTLRFNSKNSSKTPKYRIF----IKHPTKFYNTNYRQK 269
           F  W+  +  K N  + F++   S     ++F     K+  K Y  N+ +K
Sbjct: 23  FGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEK 73


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = -3

Query: 409 FVTWRTPMWNKENKTLRFNSKNSSKTPKYRIF----IKHPTKFYNTNYRQK 269
           F  W+  +  K N  + F++   S     ++F     K+  K Y  N+ +K
Sbjct: 23  FGLWKLDVKTKTNSGVEFSTSGHSNQDTGKVFGSLETKYKVKEYGLNFSEK 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,253
Number of Sequences: 2352
Number of extensions: 13084
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)