Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0094
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    26   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.7  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   6.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   6.2  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 709 ICTIDKYG-SYLGSPLTSRNNCLACTGSREAY 617
           + T++ YG  Y GS LTS  +C + T  R AY
Sbjct: 303 LLTVETYGFCYFGSDLTSEASCYSLT--RAAY 332


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 586  ELRLLLIIKIHMLLSTLYKPSNYFEKLEGF 675
            ELR+ + ++ H+L  TL KP +  + L+ F
Sbjct: 1649 ELRVSVWLEGHLLSETLIKPDSRVQALKEF 1678


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 588  FQLRNAELL*NFSFSLHLQE 529
            F   N++ L NF+F LH QE
Sbjct: 3278 FYSNNSQSLNNFTFGLHTQE 3297


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 682 YLGSPLTSRNNC 647
           Y+GS +TSRN+C
Sbjct: 208 YVGSDMTSRNSC 219


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/45 (20%), Positives = 25/45 (55%)
 Frame = +1

Query: 487 WTFSEANRILKIIKLLQMQRKRKILKKFGVPQLELRLLLIIKIHM 621
           W   +  +  + I++  ++R+     +F VP++ + + ++IKI +
Sbjct: 420 WIKIKVEKADQTIEITNIKRRNPYTIQFSVPEVCMEISMMIKIRL 464


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 253  RSTEHHLVQKVLFLIYFALE-EKAMLKRHQNNNNQKRPKTKRSQK 384
            RST++H  Q+ L L   A E +   L R Q    Q++ + ++ Q+
Sbjct: 1271 RSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQ 1315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,762
Number of Sequences: 2352
Number of extensions: 15247
Number of successful extensions: 70
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)