Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0093
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.41 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.8  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.9  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +2

Query: 95  LLPTYNERENLPIIIWLIIKYLDESLVDYEVIII 196
           ++P + +R  +P+I+W    Y    + D    I+
Sbjct: 138 IVPYFQDRREMPLIVWFPFDYKQPVVFDLVYFIL 171


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +2

Query: 233 RQLQKLYGSSKIVLRPREMKLGLGTAYIHGIQQASGNFIIIMDADLSHHPKFIPE 397
           +++ +LY S   + R    KLG       G + A G+ + +   DL H+P   P+
Sbjct: 369 KEVLRLYPSVHFISR----KLGEDLVTHSGHKLAKGSIVNLHIYDLHHNPAIYPD 419


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 214 IRASIIYYDHFVIDKAFV*IFNY*PYYYREVF 119
           IR ++ Y   FVI+  +V    Y  YY+R+ +
Sbjct: 95  IRKNLYYLLLFVINVLYVLTLCYAVYYWRQQY 126


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 412 LEFNELWNELWMMAQIRIHYNNKISR 335
           L+F  L N+L +  + R+ YN   S+
Sbjct: 76  LQFRLLENKLGVRQENRVKYNQNYSK 101


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 412 LEFNELWNELWMMAQIRIHYNNKISR 335
           L+F  L N+L +  + R+ YN   S+
Sbjct: 136 LQFRLLENKLGVRQENRVKYNQNYSK 161


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 412 LEFNELWNELWMMAQIRIHYNNKISR 335
           L+F  L N+L +  + R+ YN   S+
Sbjct: 136 LQFRLLENKLGVRQENRVKYNQNYSK 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,156
Number of Sequences: 336
Number of extensions: 3066
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)