Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0091
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    24   4.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.6  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        23   6.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.1  

>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 318 VRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGT 190
           +R +D  SP     +PQ   R ++ R     A+V G+R  RG+
Sbjct: 47  LRHDDFPSPNECCSKPQWINRYAVRRCRYIHAEVDGSRYERGS 89


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 267 ATRRLSLCRGSCGCAKVSGTRR 202
           ATRRL LC  +CG    +  RR
Sbjct: 169 ATRRLGLCCTNCGTRTTTLWRR 190


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 465 PALQQAIVQGKYDAGITETFFNDAE 539
           P  Q  +    Y  G  ETFFN+ +
Sbjct: 249 PGTQMIVANALYFRGTWETFFNEPQ 273


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 142 VSDCFSSWCAW*RRRVRTTC 201
           + DC   +C+W +R   T C
Sbjct: 792 LQDCIEIFCSWCKRNGLTIC 811


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,610
Number of Sequences: 2352
Number of extensions: 12848
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)