BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0091 (633 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 33 1.1 BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 33 1.1 BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 33 1.1 AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 33 1.1 AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 33 1.1 AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 33 1.1 BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 31 3.4 AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 31 3.4 U47677-1|AAC50719.1| 437|Homo sapiens transcription factor E2F1... 31 4.5 S49592-1|AAB24289.1| 476|Homo sapiens transcription factor E2F ... 31 4.5 M96577-1|AAA35782.1| 437|Homo sapiens E2F-1 protein. 31 4.5 BC127744-1|AAI27745.1| 272|Homo sapiens hypothetical gene suppo... 31 4.5 BC127743-1|AAI27744.1| 272|Homo sapiens hypothetical gene suppo... 31 4.5 BC058902-1|AAH58902.1| 437|Homo sapiens E2F transcription facto... 31 4.5 BC050369-1|AAH50369.1| 437|Homo sapiens E2F transcription facto... 31 4.5 AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 p... 31 4.5 AL121906-7|CAC08486.1| 437|Homo sapiens E2F transcription facto... 31 4.5 AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens ... 31 4.5 AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens ... 31 4.5 AF516106-1|AAM47604.1| 437|Homo sapiens E2F transcription facto... 31 4.5 BC111761-1|AAI11762.1| 1065|Homo sapiens inversin, isoform a pro... 30 5.9 AL445214-4|CAI39744.1| 1065|Homo sapiens inversin protein. 30 5.9 AL356798-2|CAI40807.1| 1065|Homo sapiens inversin protein. 30 5.9 AL137072-3|CAH72173.1| 1065|Homo sapiens inversin protein. 30 5.9 AF084382-1|AAC79456.1| 1065|Homo sapiens inversin protein protein. 30 5.9 AF084367-1|AAC79436.1| 1065|Homo sapiens inversin protein protein. 30 5.9 AF039217-1|AAD02131.2| 1013|Homo sapiens inv candidate homolog p... 30 5.9 AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III. ... 30 7.8 >M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear protein protein. Length = 484 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 314 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 369 Query: 138 S 136 S Sbjct: 370 S 370 >BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein protein. Length = 332 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 162 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 217 Query: 138 S 136 S Sbjct: 218 S 218 >BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, arginine/serine-rich 11 protein. Length = 483 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 314 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 369 Query: 138 S 136 S Sbjct: 370 S 370 >AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, arginine/serine-rich 11 protein. Length = 424 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 254 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 309 Query: 138 S 136 S Sbjct: 310 S 310 >AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, arginine/serine-rich 11 protein. Length = 484 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 314 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 369 Query: 138 S 136 S Sbjct: 370 S 370 >AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, arginine/serine-rich 11 protein. Length = 483 Score = 32.7 bits (71), Expect = 1.1 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 315 RSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAVRDT 139 + ED E RS + P++ S R S ++ RR+R GT +P PR+P+RK R Sbjct: 314 KKEDKEKKRS-KTPPKS---YSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSP 369 Query: 138 S 136 S Sbjct: 370 S 370 >BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. Length = 394 Score = 31.1 bits (67), Expect = 3.4 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -1 Query: 315 RSEDTESPRS---PRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAV 148 + ED E RS P+ A R S ++ RR+R GT +P PR+P+RK Sbjct: 314 KKEDKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLS 373 Query: 147 RDTS 136 R S Sbjct: 374 RSPS 377 >AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, arginine/serine-rich 11 protein. Length = 389 Score = 31.1 bits (67), Expect = 3.4 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -1 Query: 315 RSEDTESPRS---PRDQPQATRRLSLCRGSCGCAKVSGTRRAR-GTHAPTSPRTPRRKAV 148 + ED E RS P+ A R S ++ RR+R GT +P PR+P+RK Sbjct: 314 KKEDKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLS 373 Query: 147 RDTS 136 R S Sbjct: 374 RSPS 377 >U47677-1|AAC50719.1| 437|Homo sapiens transcription factor E2F1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >S49592-1|AAB24289.1| 476|Homo sapiens transcription factor E2F like protein protein. Length = 476 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 117 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 170 >M96577-1|AAA35782.1| 437|Homo sapiens E2F-1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >BC127744-1|AAI27745.1| 272|Homo sapiens hypothetical gene supported by AK125122 protein. Length = 272 Score = 30.7 bits (66), Expect = 4.5 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 319 SSLGGYGVTQVTS*PASSNASTIPLPRELWLREGIGNTQSTWYARADVTTHTKKKSSPRH 140 SSLG GVT++ + AS E WL + Q T + R D +K +PR Sbjct: 72 SSLGSVGVTEINKTAGAQLASGTDAAPEAWLEDERSVLQET-FPRLDPPPPITRKRTPRA 130 Query: 139 L 137 L Sbjct: 131 L 131 >BC127743-1|AAI27744.1| 272|Homo sapiens hypothetical gene supported by AK125122 protein. Length = 272 Score = 30.7 bits (66), Expect = 4.5 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 319 SSLGGYGVTQVTS*PASSNASTIPLPRELWLREGIGNTQSTWYARADVTTHTKKKSSPRH 140 SSLG GVT++ + AS E WL + Q T + R D +K +PR Sbjct: 72 SSLGSVGVTEINKTAGAQLASGTDAAPEAWLEDERSVLQET-FPRLDPPPPITRKRTPRA 130 Query: 139 L 137 L Sbjct: 131 L 131 >BC058902-1|AAH58902.1| 437|Homo sapiens E2F transcription factor 1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >BC050369-1|AAH50369.1| 437|Homo sapiens E2F transcription factor 1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 precursor protein protein. Length = 1332 Score = 30.7 bits (66), Expect = 4.5 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 241 RELWLREGIGNTQSTWYARADVTTHTKKKSSPRH 140 R W EG+ +S+W+ R + +K S+P H Sbjct: 467 RHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPH 500 >AL121906-7|CAC08486.1| 437|Homo sapiens E2F transcription factor 1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens cDNA FLJ16759 fis, clone BRACE3046450, highly similar to Interleukin-16 precursor. ). Length = 1331 Score = 30.7 bits (66), Expect = 4.5 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 241 RELWLREGIGNTQSTWYARADVTTHTKKKSSPRH 140 R W EG+ +S+W+ R + +K S+P H Sbjct: 467 RHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPH 500 >AK124565-1|BAC85888.1| 1163|Homo sapiens protein ( Homo sapiens cDNA FLJ42574 fis, clone BRACE3008137, highly similar to Interleukin-16 precursor. ). Length = 1163 Score = 30.7 bits (66), Expect = 4.5 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 241 RELWLREGIGNTQSTWYARADVTTHTKKKSSPRH 140 R W EG+ +S+W+ R + +K S+P H Sbjct: 299 RHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPH 332 >AF516106-1|AAM47604.1| 437|Homo sapiens E2F transcription factor 1 protein. Length = 437 Score = 30.7 bits (66), Expect = 4.5 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = -1 Query: 297 SPRSPRDQPQATRRLSLCRGSCGCAKVSGTRRARGTHAPTSPRTPRRKAVRDTS 136 +PR +P RRL L A+ SG R RG H ++P K+ +TS Sbjct: 78 APRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETS 131 >BC111761-1|AAI11762.1| 1065|Homo sapiens inversin, isoform a protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AL445214-4|CAI39744.1| 1065|Homo sapiens inversin protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AL356798-2|CAI40807.1| 1065|Homo sapiens inversin protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AL137072-3|CAH72173.1| 1065|Homo sapiens inversin protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AF084382-1|AAC79456.1| 1065|Homo sapiens inversin protein protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AF084367-1|AAC79436.1| 1065|Homo sapiens inversin protein protein. Length = 1065 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 776 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 833 Query: 156 KAVR 145 K + Sbjct: 834 KVTQ 837 >AF039217-1|AAD02131.2| 1013|Homo sapiens inv candidate homolog protein. Length = 1013 Score = 30.3 bits (65), Expect = 5.9 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Frame = -1 Query: 321 PVRSEDTESPRSPRDQPQATRRLSLCRGSCGCAKVS--GTRRARGTHAPTSP---RTPRR 157 P R DTE P++ + PQ R L G C A S G+ R HA +P RTPR Sbjct: 724 PSRRHDTE-PKA-KCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRN 781 Query: 156 KAVR 145 K + Sbjct: 782 KVTQ 785 >AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III. protein. Length = 142 Score = 29.9 bits (64), Expect = 7.8 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Frame = -1 Query: 324 WPVRSEDTESPRSPRDQPQATRRLSLCRGS---CGCAKVSGTRRARGTHAPTSPRTPRRK 154 WP S E PR+ P + R LC + G + S G PTS T R + Sbjct: 52 WPAGSWAAEGHWPPREAPSSGRGQGLCGSASWLAGATRGSWASATTGAGRPTSAPTRRTR 111 Query: 153 A 151 A Sbjct: 112 A 112 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 91,080,610 Number of Sequences: 237096 Number of extensions: 2081586 Number of successful extensions: 13497 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 13010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13493 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6916500330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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