Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0091
         (633 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g42723.1 68416.m04459 hypothetical protein                          28   4.5  
At3g11860.1 68416.m01454 expressed protein ; expression supporte...    28   4.5  
At1g07150.1 68414.m00761 protein kinase family protein contains ...    28   4.5  
At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate aldol...    28   5.9  
At5g24280.1 68418.m02856 expressed protein ; expression supporte...    27   7.8  
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR...    27   7.8  
At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldol...    27   7.8  
At4g20850.1 68417.m03025 subtilase family protein contains simil...    27   7.8  

>At3g42723.1 68416.m04459 hypothetical protein
          Length = 806

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -2

Query: 569 GHLKYCPVTSFGIVEERFRDARVVFPLDDRLL*SRRCQGNPGDVLGQS 426
           G  +  P+      EE  R+ARV  PLD+ L   RRC  N  +  G++
Sbjct: 241 GRERLPPLVKDSHCEEEHREARVSRPLDENL---RRCLSNFENYFGEN 285


>At3g11860.1 68416.m01454 expressed protein ; expression supported
           by MPSS
          Length = 252

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 277 PASSNASTIPLPRELWLREGIGNTQSTWYARADVTTHTKKKSSP 146
           P  +  S++PLP+   L++  G +QS    R     HT   S P
Sbjct: 168 PLQTEMSSLPLPQHFVLQKPAGTSQSKADTRKATLVHTVMPSLP 211


>At1g07150.1 68414.m00761 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 499

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 446 GDVLGQSLHERYTSIRVSLLMHVHRFTYRYC 354
           G +  ++L +RYT+  VS L HVH   + +C
Sbjct: 119 GKIEDETLLQRYTACLVSALRHVHSQGFVHC 149


>At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate
           aldolase, putative / 3-deoxy-D-arabino-heptulosonate
           7-phosphate synthase, putative / DAHP synthetase,
           putative similar to 3-deoxy-D-arabino-heptulosonate
           7-phosphate GI:170224 from [Nicotiana tabacum],
           SP|P21357 from Solanum tuberosum; contains Pfam Class-II
           DAHP synthetase family domain PF01474
          Length = 527

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +3

Query: 252 IVDALLEAGHEVTWVTPYPPSELAK---GLKIVDVSATVS-ISKTVDMHEQRNSNTGVSF 419
           ++  +  AG  VTWV+        K   GLK     A ++ +    D+HEQ  S+ G   
Sbjct: 404 LIREVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAILAEVRAFFDVHEQEGSHPGGIH 463

Query: 420 VKALAENIT 446
           ++   +N+T
Sbjct: 464 LEMTGQNVT 472


>At5g24280.1 68418.m02856 expressed protein ; expression supported
           by MPSS
          Length = 1634

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -3

Query: 403 FEFLCSCMSTVLLIDTVALTSTIFRPLASSLGGYGVTQV 287
           F ++  C++T+ L D ++ T    RP+A  + G  + ++
Sbjct: 359 FPYIQFCLATIFLCDELSKTGRTERPVAFQVNGEDLAEI 397


>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 614 GFQLRHHCDGGHQDPGHLKYCPVTSFGIVEERFRDARVVFPLDD 483
           GFQLR       +   H K+  +   G+V+ER +D +V+  LDD
Sbjct: 257 GFQLRLQEQFLSEVIDH-KHMKIHDLGLVKERLQDLKVLVVLDD 299


>At4g39980.1 68417.m05662 2-dehydro-3-deoxyphosphoheptonate aldolase
           1 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
           1 / DAHP synthetase 1 (DHS1) nearly identical to
           SP|P29965
          Length = 525

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +3

Query: 252 IVDALLEAGHEVTWVTPYPPSELAK---GLKIVDVSATVS-ISKTVDMHEQRNSNTGVSF 419
           ++ A+  +G  VTWV         K   GLK     + ++ +   +D+HEQ  S+ G   
Sbjct: 404 LIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIH 463

Query: 420 VKALAENIT 446
           ++   +N+T
Sbjct: 464 LEMTGQNVT 472


>At4g20850.1 68417.m03025 subtilase family protein contains
           similarity to Tripeptidyl-peptidase II (EC 3.4.14.10)
           (TPP-II) (Tripeptidyl aminopeptidase)
           (Swiss-Prot:P29144) [Homo sapiens]
          Length = 1380

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 265 NASTIPLPRELWLREGIGNTQST-WYARADVTTH 167
           +  TIP  R ++LREG    QST W  + D   H
Sbjct: 640 SGKTIPTSRGIYLREGTACRQSTEWTIQVDPKFH 673


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,283
Number of Sequences: 28952
Number of extensions: 290157
Number of successful extensions: 887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)