Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0090
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    26   1.4  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   3.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.7  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = -2

Query: 527 QSDETDLGAVEELPAVGRLLAPAHVARVFPEQSHLIRSR----VSVPESVPEYLPR 372
           +SDE D  AV +L A   +++P    ++FP   HL+  R    V    SV   +PR
Sbjct: 280 RSDEKDQQAVCQLVAKEPMISPMTFCKIFP--FHLMFDRNMHIVQAGRSVSRVIPR 333


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 151 SDSTASAESTTRGPSSSTQR*TT 219
           S ST S+ STT   SSS+ + TT
Sbjct: 543 SSSTTSSSSTTSSSSSSSSKTTT 565


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
 Frame = +3

Query: 603  GVFCFSQEMIIW--SNLLYK 656
            G+FC+ +E+ +W  S L YK
Sbjct: 1042 GIFCYRKELKVWVHSGLCYK 1061


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +2

Query: 374 GEDTQERSLEH*LYSGSGDFALERPSQRGLARADGLPLEAPPPP 505
           G D Q  +      S S    +  PS+   A   G P   PPPP
Sbjct: 747 GGDQQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPP 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,948
Number of Sequences: 2352
Number of extensions: 17843
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)